Contig 011953:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022G15Sequence444011953 (2)ref|XP_007218634.1|9e-05hypothetical protein PRUPE_ppa013665mg [Prunus persica] gb|EMJ19833.1| hypotheti668015926emb|CDP17004.1|2e-24unnamed protein product [Coffea canephora]
JMSF013I02Sequence490011953 (2)ref|XP_010663847.1|1e-22PREDICTED: RNA-binding protein 10 isoform X3 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF022G15+ CTTTTA
                      ____________________________________________________________
consensus CTTTTA
 
. : . : . : . : . : . :
JMFF022G15+ AACATCTGTTCACTCACCGGAAGTCATGCTCATGGACTCCACCATAACCCTCCAAAGCCT
                      ____________________________________________________________
consensus AACATCTGTTCACTCACCGGAAGTCATGCTCATGGACTCCACCATAACCCTCCAAAGCCT
 
. : . : . : . : . : . :
JMFF022G15+ GTGGATTCAAGACAATAAGCTATGTCAGCAATTAATTATCATGGTACAAGGTAGGGAAAT
                      ____________________________________________________________
consensus GTGGATTCAAGACAATAAGCTATGTCAGCAATTAATTATCATGGTACAAGGTAGGGAAAT
 
. : . : . : . : . : . :
JMFF022G15+ CCATTCCACATCCTCACTGTCCCAAGGCTTTCTTTCAATGTTCTTTAAGGAAGAGATGTC
                      ____________________________________________________________
consensus CCATTCCACATCCTCACTGTCCCAAGGCTTTCTTTCAATGTTCTTTAAGGAAGAGATGTC
 
. : . : . : . : . : . :
JMFF022G15+ TGAAAATGGGACAGTCTCATGAGCCTAGTTTCTTGTTTATCATCCCATATATGTGATTAA
                      ____________________________________________________________
consensus TGAAAATGGGACAGTCTCATGAGCCTAGTTTCTTGTTTATCATCCCATATATGTGATTAA
 
. : . : . : . : . : . :
JMFF022G15+ GAAGGAAACCACAATTACGCTGTTATTTTCCCATCCTTGCTGAGGGCAATATCGACCAGG
JMSF013I02+ CGCTGTTATTTTCCCATCCTTGCTGAGGGCAATATCGACCAGG
                      ____________________________________________________________
consensus GAAGGAAACCACAATTACGCTGTTATTTTCCCATCCTTGCTGAGGGCAATATCGACCAGG
 
. : . : . : . : . : . :
JMFF022G15+ ATCCATTTCTTGCAAGAAGACTGGTGCTACCCCTACAAAGTTGTGCACGATCTTTCAGAA
JMSF013I02+ ATCCATTTCTTGCAAGAAGACTGGTGCTACCCCTACAAAGTTGTGCACGATCTTTCAGAA
                      ____________________________________________________________
consensus ATCCATTTCTTGCAAGAAGACTGGTGCTACCCCTACAAAGTTGTGCACGATCTTTCAGAA
 
. : . : . : . : . : . :
JMFF022G15+ GATTCAGGAGCAAGATGACTGAAAACCTTTCAATTAAACCGCTGCAGAATCGAGGAAACA
JMSF013I02+ GATTCAGGAGCAAGATGACTGAAAACCTTTCAATTAAACCGCTGCAGAATCGAGGAAACA
                      ____________________________________________________________
consensus GATTCAGGAGCAAGATGACTGAAAACCTTTCAATTAAACCGCTGCAGAATCGAGGAAACA
 
. : . : . : . : . : . :
JMFF022G15+ GCTCCGATTGTGATTCCC
JMSF013I02+ GCTCCGATTGTGATTCCCGGAGCTCCACCCGGATCGATTCTACAAATCAAATCAAATCCA
                      ____________________________________________________________
consensus GCTCCGATTGTGATTCCCGGAGCTCCACCCGGATCGATTCTACAAATCAAATCAAATCCA
 
. : . : . : . : . : . :
JMSF013I02+ AATACGACGAATAGCTTGACCGATTACAGGCTGAAGGTCTTCTACGAAGCATAAATTGAA
                      ____________________________________________________________
consensus AATACGACGAATAGCTTGACCGATTACAGGCTGAAGGTCTTCTACGAAGCATAAATTGAA
 
. : . : . : . : . : . :
JMSF013I02+ GGCAGAGAGGTGGGGGTGGGAAATCTGAATAAACAAACCCTAAGACACTGTTATTTGTCC
                      ____________________________________________________________
consensus GGCAGAGAGGTGGGGGTGGGAAATCTGAATAAACAAACCCTAAGACACTGTTATTTGTCC