Contig 011912:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024P10Sequence493011912 (5)ref|XP_008465521.1|2e-52PREDICTED: metal-nicotianamine transporter YSL1-like [Cucumis melo]676004027 (4)ref|XP_009762638.1|1e-105PREDICTED: metal-nicotianamine transporter YSL1-like isoform X3 [Nicotiana sylv
JMFS033A03Sequence591011912 (5)ref|XP_010676897.1|1e-92PREDICTED: metal-nicotianamine transporter YSL1-like [Beta vulgaris subsp. vulg
JMFS088B02Sequence640011912 (5)ref|XP_010676897.1|2e-91PREDICTED: metal-nicotianamine transporter YSL1-like [Beta vulgaris subsp. vulg
JMSF008C14Sequence337011912 (5)ref|XP_010658081.1|2e-21PREDICTED: YS1-like protein-like isoform X1 [Vitis vinifera]772004027 (4)ref|XP_009587676.1|2e-119PREDICTED: metal-nicotianamine transporter YSL1-like isoform X2 [Nicotiana tome
JMSF034A13Sequence441011912 (5)gb|KDO59686.1|2e-44hypothetical protein CISIN_1g0442262mg, partial [Citrus sinensis]

Alignment

This contig is upended


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JMFS033A03+                          TCTTATCACTCTGNGCATGGAATCCATTGATGAGAACCGCAGTGN
JMFS088B02+                                        GCATGGAATCCATTGATGAGAACCGCAGTTG
                      ____________________________________________________________
consensus                            TCTTATCACTCTGNGCATGGAATCCATTGATGAGAACCGCAGTTG
 
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JMFS033A03+           CCATTCCAGTTGGAAAGGTCAATTTGTAGTCAATTATCAAGATCTTTCTGAGAGGAATCA
JMFS088B02+           CCATTCCAGTTGGAAAGGTCAATTTGTAGTCAATTATCAAGATCTTTCTGAGAGGAATCA
                      ____________________________________________________________
consensus             CCATTCCAGTTGGAAAGGTCAATTTGTAGTCAATTATCAAGATCTTTCTGAGAGGAATCA
 
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JMFS033A03+           ACACAAAAAGGCCAATGAAACAAACCACAAGCTGGTAGCCAGTCATCCACCCAATCTCAA
JMFS088B02+           ACACAAAAAGGCCAATGAAACAAACCACAAGCTGGTAGCCAGTCATCCACCCAATCTCAA
                      ____________________________________________________________
consensus             ACACAAAAAGGCCAATGAAACAAACCACAAGCTGGTAGCCAGTCATCCACCCAATCTCAA
 
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JMFS033A03+           GTTTCTTGTAACTGCTAGGATTGTTCCCAACTGTTTCAACCCCTGCAAGCTCATATGTTT
JMFS088B02+           GTTTCTTGTAACTGCTAGGATTGTTCCCAACTGTTTCAACCCCTGCAAGCTCATATGTTT
JMFF024P10+                                                        CAAGCTCATATGTTT
                      ____________________________________________________________
consensus             GTTTCTTGTAACTGCTAGGATTGTTCCCAACTGTTTCAACCCCTGCAAGCTCATATGTTT
 
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JMFS033A03+           TCTTGTCCATCCCCAACAAGTACGATCCTAGTCCACCTCCGATTGCAATGCTGTAGCAGG
JMFS088B02+           TCTTGTCCATCCCCAACAAGTACGATCCTAGTCCACCTCCGATTGCAATGCTGTAGCAGG
JMSF034A13+                                       TAGTCCACCTCCGATTGCAATGCNGTAGCAGG
JMFF024P10+           TCTTGTCCATCCCCAACAAGTACGATCNTAGTCCACCTCCGATTGCAATGCTGTAGCAGG
                      ____________________________________________________________
consensus             TCTTGTCCATCCCCAACAAGTACGATCCTAGTCCACCTCCGATTGCAATGCTGTAGCAGG
 
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JMFS033A03+           CGACGGCGGAGGTCTGGATCATGGTGTTCTCCTGGCGAGTGAACGGCGCCGATGAAATCC
JMFS088B02+           CGACGGCGGAGGTCTGGATCATGGTGTTCTCCTGGCGAGTGAACGGCGCCGATGAAATCC
JMSF034A13+           CGACGGCGGAGGTCTGGATCATGGTGTTCTCCTGGCGAGTGAACGGCGCCGANGAAATCC
JMFF024P10+           CGACGGCGGAGGTCTGGATCATGGTGTTCTCCTGGCGAGTGAACGGCGCCGATGAAATCC
                      ____________________________________________________________
consensus             CGACGGCGGAGGTCTGGATCATGGTGTTCTCCTGGCGAGTGAACGGCGCCGATGAAATCC
 
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JMFS033A03+           CGAGCTTGCGAAGCACCTTAGTCCACGTTCTGACGAAGATGAAGGCCAGCAGCGCGGCGG
JMFS088B02+           CGAGCTTGCGAAGCACCTTAGTCCACGTTCTGACGAAGATGAAGGCCAGCAGCGCGGCGG
JMSF034A13+           CGAGCTTGCGAAGCACCTTAGTCCACGTTCTGACGAAGATGAAGGCCAGCAGCGCGGCGG
JMFF024P10+           CGAGCTTGCGAAGCACCTTAGTCCACGTTCTGACGAAGATGAAGGCCAGCAGCGCGGCGG
JMSF008C14+                                  CACGTTCTGACGAAGATGAAGGCCAGCAGCGCGGCGG
                      ____________________________________________________________
consensus             CGAGCTTGCGAAGCACCTTAGTCCACGTTCTGACGAAGATGAAGGCCAGCAGCGCGGCGG
 
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JMFS033A03+           AGACGTTGAAGTTGGGAGTGATTCCGGTGGTGAGATTCAGCTTCATAGCTATCACGCTGT
JMFS088B02+           AGACGTTGAAGTTGGGAGTGATTCCGGTGGTGAGATTCAGCTTCATAGCTATCACGCTGT
JMSF034A13+           AGACGTTGAAGTTGGGAGTGATTCCGGTGGTGAGATTCAGCTTCATAGCTATCACGCTGT
JMFF024P10+           AGACGTTGAAGTTGGGAGTGATTCCGGTGGTGAGATTCAGCTTCATAGCTATCACGCTGT
JMSF008C14+           AGACGTTGAAGTTGGGAGTGATTCCGGTGGTGAGATTCAGCTTCATAGCTATCACGCTGT
                      ____________________________________________________________
consensus             AGACGTTGAAGTTGGGAGTGATTCCGGTGGTGAGATTCAGCTTCATAGCTATCACGCTGT
 
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JMFS033A03+           AAATGCATCCTATTACGGCGCTCGCCACCACTCCCCTCACCGTTATCTGCTTCGTCCACG
JMFS088B02+           AAATGCATCCTATTACGGCGCTCGCCACCACTCCCCTCACCGTTATCTGCTTCGTCCACG
JMSF034A13+           AAATGCATCCTATTACGGCGCTCGCCACCACTCCCCTCACCGTTATCTGCTTCGTCCACG
JMFF024P10+           AAATGCATCCTATTACGGCGCTCGCCACCACTCCCCTCACCGTTATCTGCTTCGTCCACG
JMSF008C14+           AAATGCATCCTATTACGGCGCTCGCCACCACTCCCCTCACCGTTATCTGCTTCGTCCACG
                      ____________________________________________________________
consensus             AAATGCATCCTATTACGGCGCTCGCCACCACTCCCCTCACCGTTATCTGCTTCGTCCACG
 
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JMFS033A03+           GTGGCAAGCGCGTCTCCGACGGCAACTCTTCTTCTTCTTCTTGCTTCTGATCCTCCATGG
JMFS088B02+           GTGGCAAGCGCGTCTCCGACGGCAACTCTTCTTCTTCTTCTTGCTTCTGATCCTCCATGG
JMSF034A13+           GTGGCAAGCGCGTCTCCGACGGCAACTATTCTTCTTCTTCTTGCTTCTGATCCTCCATGG
JMFF024P10+           GTGGCAAGCGCGTCTCCGACGGCAACTCTTCTTCTTCTTCTTGCTTCTGATCCTCCATGG
JMSF008C14+           GTGGCAAGCGCGTCTCCGACGGCAACTCTTCTTCTTCTTCTTGCTTCTGATCCTCCATGG
                      ____________________________________________________________
consensus             GTGGCAAGCGCGTCTCCGACGGCAACTCTTCTTCTTCTTCTTGCTTCTGATCCTCCATGG
 
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JMFS033A03+           CCGCCA                                                      
JMFS088B02+           CCGCCATTACTGCCGCTTCTTTCCTCTGGGTTATTATCTGCTCTTATGAACTCATGGGTT
JMSF034A13+           CCGCCATTACTGCCGCTTCTTTCCTCTGGGTTATTATCTGCTCTTCTGAACTCATGGGTT
JMFF024P10+           CCGCCATTACTGCCGCTTCTTTCCTCTGGGTTATTATCTGCTCTTCTGAACTCATGGGTT
JMSF008C14+           CCGCCATTACTGCCGCTTCTTTCCTCTGGGTTATTATCTGCTCTTCTGAACTCATGGGTT
                      ____________________________________________________________
consensus             CCGCCATTACTGCCGCTTCTTTCCTCTGGGTTATTATCTGCTCTTCTGAACTCATGGGTT
 
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JMFS088B02+           TTG                                                         
JMSF034A13+           TTGGATCGCAAAATCAATGGTGGCAGAACACAGATTATGGAATAATGT            
JMFF024P10+           TTGGATCGCAAAATCAATGGTGGCAGAACACAGATTATGGAATAATGTATGAAAACCC  
JMSF008C14+           TTGGATCGCAAAATCAATGGTGGCAGAACACAGATTATGGAATAATGTATGAAAACCCCG
                      ____________________________________________________________
consensus             TTGGATCGCAAAATCAATGGTGGCAGAACACAGATTATGGAATAATGTATGAAAACCCCG