Contig 011911:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007E24Sequence565011911 (7)gb|KDO58886.1|3e-17hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis]744008442 (9)ref|XP_009765510.1|1e-80PREDICTED: S-adenosylmethionine decarboxylase proenzyme, partial [Nicotiana syl
JMFF012O02Sequence523011911 (7)gb|KDO58886.1|2e-17hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis]611008442 (9)ref|XP_009625495.1|9e-58PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor
JMFF029C09Sequence483011911 (7)gb|KDO58886.1|2e-17hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis]739008442 (9)ref|XP_009625495.1|7e-75PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor
JMFF037O16Sequence573011911 (7)ref|XP_010046605.1|50.1PREDICTED: uncharacterized protein LOC104435580, partial [Eucalyptus grandis]738008442 (9)ref|XP_009625495.1|7e-79PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor
JMFF039I06Sequence623011911 (7)gb|KDO58886.1|4e-17hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis]630008442 (9)ref|XP_009765510.1|7e-59PREDICTED: S-adenosylmethionine decarboxylase proenzyme, partial [Nicotiana syl
JMFS164D04Sequence624011911 (7)gb|KDO58886.1|4e-17hypothetical protein CISIN_1g043845mg, partial [Citrus sinensis]
JMSF008A05Sequence264011911 (7)766008442 (9)ref|XP_009625495.1|2e-84PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Nicotiana tomentosifor

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS164D04+ TCCAATTGAGCTCTCGAAAGCAATCGAAGGCCCTTTCCATTAGGATCAGCAAAGATTCCG
JMFF039I06+ CCTTTCCATTAGGATCAGCAAAGATTCCG
                      ____________________________________________________________
consensus TCCAATTGAGCTCTCGAAAGCAATCGAAGGCCCTTTCCATTAGGATCAGCAAAGATTCCG
 
. : . : . : . : . : . :
JMFS164D04+ GGTTCAGAAAACACAATCTCGAGCCTCTTCTCATACCCTTCGAATCCAATGGGAGACACA
JMFF007E24+ TCTCATACCCTTCGAATCCAATGGGAGACACA
JMFF039I06+ GGTTCAGAAAACACAATCTCGAGCCTCTTCTCATACCCTTCGAATCCAATGGGAGACACA
JMFF037O16+ CTTCTCATACCCTTCGAATCCAATGGGAGACACA
                      ____________________________________________________________
consensus GGTTCAGAAAACACAATCTCGAGCCTCTTCTCATACCCTTCGAATCCAATGGGAGACACA
 
. : . : . : . : . : . :
JMFS164D04+ GACACAGACAACGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
JMFF007E24+ GACACAGACAACGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
JMFF012O02+ CGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
JMFF029C09+ TAGGGGGAC
JMFF039I06+ GACACAGACAACGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
JMFF037O16+ GACACAGACAACGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
                      ____________________________________________________________
consensus GACACAGACAACGCCATTTCCATAACGCGAAATAGACCGAAAACAATTATTTAGGGGGAC
 
. : . : . : . : . : . :
JMFS164D04+ AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
JMFF007E24+ AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
JMFF012O02+ AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
JMFF029C09+ AAAAGCAGCAAANCAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
JMFF039I06+ AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
JMFF037O16+ AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
                      ____________________________________________________________
consensus AAAAGCAGCAAAACAAAGAAGAAAAGGAGTGCGAGGGTTAACAACAATGCGAGAAAAGAA
 
. : . : . : . : . : . :
JMFS164D04+ AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
JMFF007E24+ AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
JMFF012O02+ AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
JMFF029C09+ AATCCTAAAGGCAGCACACGTCTNGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
JMFF039I06+ AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
JMFF037O16+ AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
                      ____________________________________________________________
consensus AATCCTAAAGGCAGCACACGTCTTGATGAGACGTGATAAGAATAAGAACAATTAAGGAAT
 
. : . : . : . : . : . :
JMFS164D04+ ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
JMFF007E24+ ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
JMFF012O02+ ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
JMFF029C09+ ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
JMFF039I06+ ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
JMFF037O16+ ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATTCCCT
                      ____________________________________________________________
consensus ATCAGGATGGTTTGCGGGCGCAGTTAGAGTAAGCAGCAGATCTGAACTTCTTGATT-CCT
 
. : . : . : . : . : . :
JMFS164D04+ CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMFF007E24+ CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMFF012O02+ CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMFF029C09+ CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMFF039I06+ CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMFF037O16+ CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
JMSF008A05+ GGAGCTTCGTAGAATAAGGACGAT
                      ____________________________________________________________
consensus CCGTTTGGTCGAATGTCTTCAATGCTGTAACCGAGGGGAGCTTCGTAGAATAAGGACGAT
 
. : . : . : . : . : . :
JMFS164D04+ TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMFF007E24+ TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMFF012O02+ TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMFF029C09+ TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMFF039I06+ TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMFF037O16+ TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
JMSF008A05+ TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
                      ____________________________________________________________
consensus TTACTACTGGATTTCTTACCACCTTTAGACTCCATTAGATCATTCAGTCTAATAATATCA
 
. : . : . : . : . : . :
JMFS164D04+ AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMFF007E24+ AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMFF012O02+ AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMFF029C09+ AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMFF039I06+ AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMFF037O16+ AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
JMSF008A05+ AAGTTGGGATTTTTATGAACCCAGTGACTCCCCATGGCTATCGGAACCGCGCCCAGATCA
                      ____________________________________________________________
consensus AAGTTGGGATTTTTATGAACCCAGTGACTCCCCAAGGCTATCGGAACCGCGCCCAGATCA
 
. : . : . : . : . : . :
JMFS164D04+ ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMFF007E24+ ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMFF012O02+ ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMFF029C09+ ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMFF039I06+ ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMFF037O16+ ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
JMSF008A05+ ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
                      ____________________________________________________________
consensus ATATAGAACTCTTTTCTCTACAAAGAATTAACACGCAATTCCGTAATGGGTTTGCAGATT
 
. : . : . : . : . : . :
JMFS164D04+ TCTTCGAGAGAACGAGAGATTTCAG
JMFF007E24+ TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGT
JMFF012O02+ TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGT
JMFF029C09+ TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGTTAT
JMFF039I06+ TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGTTAT
JMFF037O16+ TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGTTAT
JMSF008A05+ TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGTTATGAGCC
                      ____________________________________________________________
consensus TCTTCGAGAGAACGAGAGATTTCAGGGGAGATACCAAGAAAGAAGGGATTGTTATGAGCC