Contig 011905:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040K15Sequence682011905 (4)emb|CAA04654.1|8e-77major intrinsic protein PIPC [Craterostigma plantagineum]
JMFN035I02Sequence613011905 (4)ref|XP_009376943.1|8e-95PREDICTED: probable aquaporin PIP2-8 [Pyrus x bretschneideri]
JMSF006B11Sequence253011905 (4)ref|XP_009376943.1|2e-25PREDICTED: probable aquaporin PIP2-8 [Pyrus x bretschneideri]137002761 (4)
JMSF006P13Sequence248000024 (2)260011905 (4)emb|CAL07977.1|8e-06aquaporin [Platanus x acerifolia]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF040K15- GTTAC
                      ____________________________________________________________
consensus GTTAC
 
. : . : . : . : . : . :
rJMSF006P13- CAAAAGGAGTCTGACAAGATCATTGTAAAAACACNTTACATANATATGATGATAT
rJMFF040K15- CNTANCAAAAGGAGTCTGACTAGATCATTGTAAAAACACATTACATATATATAATGATAT
                      ____________________________________________________________
consensus CNTANCAAAAGGAGTCTGACTAGATCATTGTAAAAACACATTACATATATATGATGATAT
 
. : . : . : . : . : . :
rJMSF006P13- GATGATCAGCTAAATGGTAGCACACAACAATACNAGATTTGATTGATACAAATGATGATC
rJMFF040K15- GATGATCAGCTAAATGGTAGCACACAACAATACAAGATTTGATTGATACAAATGATGATC
                      ____________________________________________________________
consensus GATGATCAGCTAAATGGTAGCACACAACAATACAAGATTTGATTGATACAAATGATGATC
 
. : . : . : . : . : . :
rJMSF006P13- AGATCATATGGATAATATATGGCAGATCAAACGTTAGGGGTGCTTTGGAATGAACCACCN
rJMFF040K15- AGATCATATGGATAATATATGGCAGATCAAACGTTAGGGGTGCTTTGGAATGAACCACCA
                      ____________________________________________________________
consensus AGATCATATGGATAATATATGGCAGATCAAACGTTAGGGGTGCTTTGGAATGAACCACCA
 
. : . : . : . : . : . :
rJMSF006P13- AGAGCTTTAACAGCCTGGGCTCGGAGTACTAGCTGATGATACACTGCTCCAGCAATTGCT
rJMFF040K15- AGAGCTTTAACAGCCTGGGCTCGGAGTACTACCTGATGATACACTGCTCCAGCAATTGCT
                      ____________________________________________________________
consensus AGAGCTTTAACAGCCTGGGCTCGGAGTACTAGCTGATGATACACTGCTCCAGCAATTGCT
 
. : . : . : . : . : . :
rJMSF006P13- CCCAGCATTGGCCCAAC
rJMFF040K15- CCCAGCATTGGCCCAACCCAGAAAATCCAGTGGTCATCCCAGGCATGTTTGTTGTTGTGG
                      ____________________________________________________________
consensus CCCAGCATTGGCCCAACCCAGAAAATCCAGTGGTCATCCCAGGCATGTTTGTTGTTGTGG
 
. : . : . : . : . : . :
rJMFF040K15- ATCACAGCAGCGCCGAAACTCCTTGCTGGGTTGATGCCGGTGCCGGTGATGGGAATGGTG
                      ____________________________________________________________
consensus ATCACAGCAGCGCCGAAACTCCTTGCTGGGTTGATGCCGGTGCCGGTGATGGGAATGGTG
 
. : . : . : . : . : . :
rJMFF040K15- GCGACATGAGCCACAAACACAGCAAAACCAATGGGCAGTGGTGCCAATACCGGAACGTGA
                      ____________________________________________________________
consensus GCGACATGAGCCACAAACACAGCAAAACCAATGGGCAGTGGTGCCAATACCGGAACGTGA
 
. : . : . : . : . : . :
rJMFF040K15- GAGTCACGGGCGTTTCGTTTGGGGTCGGTGGCGGAGAAGACGGTGTAGACGAGGAAAAAG
                      ____________________________________________________________
consensus GAGTCACGGGCGTTTCGTTTGGGGTCGGTGGCGGAGAAGACGGTGTAGACGAGGAAAAAG
 
. : . : . : . : . : . :
rJMFF040K15- GTGGCGAGGATCTCAGCGACTAAGCCCACGCCCTTTGAGAAGCCAGGCTGGACGGTGTTG
                      ____________________________________________________________
consensus GTGGCGAGGATCTCAGCGACTAAGCCCACGCCCTTTGAGAAGCCAGGCTGGACGGTGTTG
 
. : . : . : . : . : . :
rJMFF040K15- GCGCCGCCGCCCACGGTGTCGAAGAAGTCCTTTGTTAAAGCTTTCACCAGTCCCACGCCA
                      ____________________________________________________________
consensus GCGCCGCCGCCCACGGTGTCGAAGAAGTCCTTTGTTAAAGCTTTCACCAGTCCCACGCCA
 
. : . : . : . : . : . :
rJMFF040K15- ACCACGGCTCCGAGGCACTGCGCCACCATGTACGCCACCGCCCGGATCAACGACACTTTC
JMFN035I02+ CACTGCGCCACCATGTACGCCACCGCCCGGATCAACGACACTTTC
                      ____________________________________________________________
consensus ACCACGGCTCCGAGGCACTGCGCCACCATGTACGCCACCGCCCGGATCAACGACACTTTC
 
. : . : . : . : . : . :
rJMFF040K15- CTTGCTAGGAACAG
JMFN035I02+ CTTGCTAGGAACAGCCCGAATGTCACCGCCGGGTTTATGTGCCCCCCAGAAATGCCGGCG
                      ____________________________________________________________
consensus CTTGCTAGGAACAGCCCGAATGTCACCGCCGGGTTTATGTGCCCCCCAGAAATGCCGGCG
 
. : . : . : . : . : . :
JMFN035I02+ GTGCAGTAGACGAGGACGAAAATCATGCCGCCGAAGACCCAAGAAATGCCAAGCAAGCCA
JMSF006B11+ GCCAAGCCAGCCA
                      ____________________________________________________________
consensus GTGCAGTAGACGAGGACGAAAATCATGCCGCCGAAGACCCAAGAAATGCCAAGCCAGCCA
 
. : . : . : . : . : . :
JMFN035I02+ GCGCCCTTGCAGGGGTCGGGGGTGGCTTTGGTGCCGATGACGGTGGCGACGCTGACGTAG
JMSF006B11+ GCGCCCTTGCAGGGNTCGGGGGTGGCTTTGGTGCCGATGACGGTGGCGACGCTGACGTAG
                      ____________________________________________________________
consensus GCGCCCTTGCAGGGGTCGGGGGTGGCTTTGGTGCCGATGACGGTGGCGACGCTGACGTAG
 
. : . : . : . : . : . :
JMFN035I02+ AGGAAGAGAAGGGTGGCGACGAACTCGGCGATGACGGCTCTGTAGAAGGACCA
JMSF006B11+ AGGAAGAGAACGGTGGCGACGAACTCGGCGATGACGGCTCTGTAGAAGGACCATTTCTTA
                      ____________________________________________________________
consensus AGGAAGAGAAGGGTGGCGACGAACTCGGCGATGACGGCTCTGTAGAAGGACCATTTCTTA
 
. : . : . : . : . : . :
JMSF006B11+ AGCTCATCCATGTCAAGCAACGCGGCAGGCGGCGGTTCAACGTAGTCCTTTGTCGACATC
                      ____________________________________________________________
consensus AGCTCATCCATGTCAAGCAACGCGGCAGGCGGCGGTTCAACGTAGTCCTTTGTCGACATC
 
. : . : . : . : . : . :
JMSF006B11+ TTCAATTCGCCGGCGTATAGTATACTAGCAGATTAGACAAATAATATAATGGAGTGAGTC
                      ____________________________________________________________
consensus TTCAATTCGCCGGCGTATAGTATACTAGCAGATTAGACAAATAATATAATGGAGTGAGTC