Contig 011870:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002D17Sequence282011870 (3)761020273gb|AAT38755.2|4e-11CAAX amino terminal protease family protein, putative [Solanum demissum]
JMSF020J04Sequence663011870 (3)gb|ABO92979.1|9e-75putative CAAX amino terminal protease [Solanum tuberosum]703011870 (3)ref|XP_011075500.1|318PREDICTED: uncharacterized protein LOC105159963 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF020J04-                                         ATGTGCCAAAACATGTTTGAATACAAACT
                      ____________________________________________________________
consensus                                            ATGTGCCAAAACATGTTTGAATACAAACT
 
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rJMSF020J04-          AAAATTCTGGCAAGAATACATTACAGCTCAAACTGCTACTACAAATCTACGAAATAAACA
                      ____________________________________________________________
consensus             AAAATTCTGGCAAGAATACATTACAGCTCAAACTGCTACTACAAATCTACGAAATAAACA
 
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rJMSF020J04-          GTTATGACTTAAGATGAAGGCTGAATAAGAAAATGCCACAACTCTGCTCACTCCTCAATC
                      ____________________________________________________________
consensus             GTTATGACTTAAGATGAAGGCTGAATAAGAAAATGCCACAACTCTGCTCACTCCTCAATC
 
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rJMSF020J04-          TGAATCAAGATGCTTGTATTATTTCCTTGATGTCATATCCTTGAAGCTGGAGGAAGGTCA
                      ____________________________________________________________
consensus             TGAATCAAGATGCTTGTATTATTTCCTTGATGTCATATCCTTGAAGCTGGAGGAAGGTCA
 
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rJMSF020J04-          GAAGCAAGATAACCCCCGAGTTCCAACACGCATGAATTGCGATTGGCGTGAGAAGATTTC
                      ____________________________________________________________
consensus             GAAGCAAGATAACCCCCGAGTTCCAACACGCATGAATTGCGATTGGCGTGAGAAGATTTC
 
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rJMSF020J04-          GTGTTTGAGCATATGAAAGTCCCAAAGCAGTCCCGAGCACAAAAAGCTGAGGAAATTCTC
                      ____________________________________________________________
consensus             GTGTTTGAGCATATGAAAGTCCCAAAGCAGTCCCGAGCACAAAAAGCTGAGGAAATTCTC
 
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rJMSF020J04-          CGGGAGTTAGATGTGCACCAGCAAATACAGAGGCGCTGAGAAGGATTGACAGTGGCGTAG
                      ____________________________________________________________
consensus             CGGGAGTTAGATGTGCACCAGCAAATACAGAGGCGCTGAGAAGGATTGACAGTGGCGTAG
 
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rJMSF020J04-          GCAGCCACTTAGTCAGGGCGACCATAAAGAACCCTCGAAACACAGTCTCCTCAAGAATCG
                      ____________________________________________________________
consensus             GCAGCCACTTAGTCAGGGCGACCATAAAGAACCCTCGAAACACAGTCTCCTCAAGAATCG
 
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rJMSF020J04-          GAGCAAGGACGCCCGTAATGCCCAACAGACTTGCAGTGCTGATAGTTGAAGAGCCGATCA
                      ____________________________________________________________
consensus             GAGCAAGGACGCCCGTAATGCCCAACAGACTTGCAGTGCTGATAGTTGAAGAGCCGATCA
 
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rJMSF020J04-          ACGGAAGCAAGCGAACAAGAGCATCAGTCTCTCTCTGTGGGGGCTCGCTATTGAGAAAAG
JMSF020J04+                                             CTGTGGGGGCTCGCTATTGAGAAAAG
                      ____________________________________________________________
consensus             ACGGAAGCAAGCGAACAAGAGCATCAGTCTCTCTCTGTGGGGGCTCGCTATTGAGAAAAG
 
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rJMSF020J04-          ACGTTGCAACCCCCGTCAACGCAATAGCAAACAACGCTCCAACGAGACCAATCGTTGCCC
JMSF020J04+           ACGTTGCAACCCCCGTCAACGCAATAGCAAACAACGCTCCAACGAGACCAATCGTTGCCC
                      ____________________________________________________________
consensus             ACGTTGCAACCCCCGTCAACGCAATAGCAAACAACGCTCCAACGAGACCAATCGTTGCCC
 
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rJMSF020J04-          ACAACAGCCACCCTCTTCGAAAATCGAAAGGCTCCCTCCAATCATATCGATATATTTCAT
JMSF020J04+           ACAACAGCCACCCTCTTCGAAAATCGAAAGGCTCCCTCCAATCATATCGATATATTTCAT
                      ____________________________________________________________
consensus             ACAACAGCCACCCTCTTCGAAAATCGAAAGGCTCCCTCCAATCATATCGATATATTTCAT
 
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rJMSF020J04-          TAGGAAGTGGCTGA                                              
JMSF020J04+           TAGGAAGTGGCTGAGACGACTTGGTGAGAGTATAGAGAACTCCAAGCACAACAATAGTTG
                      ____________________________________________________________
consensus             TAGGAAGTGGCTGAGACGACTTGGTGAGAGTATAGAGAACTCCAAGCACAACAATAGTTG
 
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JMSF020J04+           TAATAGATTGGTCCAGAAACAAAATTTCTGATTTCTCATCCAAGCTTAAGTTGTCAACTT
                      ____________________________________________________________
consensus             TAATAGATTGGTCCAGAAACAAAATTTCTGATTTCTCATCCAAGCTTAAGTTGTCAACTT
 
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JMSF020J04+           CAATTCCCAAATATGATATGGCTGCTGTTTCTATTAGCCCTGTCAGAACAAAACTTAGTC
                      ____________________________________________________________
consensus             CAATTCCCAAATATGATATGGCTGCTGTTTCTATTAGCCCTGTCAGAACAAAACTTAGTC
 
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JMSF020J04+           CACAGGCAAGTGAAGAAAGTGAAATAGTTTGCCAATTCCATGGCACATCCCACCGTCTCA
                      ____________________________________________________________
consensus             CACAGGCAAGTGAAGAAAGTGAAATAGTTTGCCAATTCCATGGCACATCCCACCGTCTCA
 
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JMSF020J04+           AGATTGGCCACTTAGGTCCACTTCCCTTGTTATCCGGTTGGTTGCCGGAAGTGTAAAGAC
JMSF002D17+                                   CCTTGTTATCCGGTTGGTTGCCGGAAGTGTAAAGAC
                      ____________________________________________________________
consensus             AGATTGGCCACTTAGGTCCACTTCCCTTGTTATCCGGTTGGTTGCCGGAAGTGTAAAGAC
 
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JMSF020J04+           AATAAGCTTTGGAGAAGCGGCGGTTCAAGGCTTGGGTGGACCGGCGAAGAGAGACCCAAT
JMSF002D17+           AATAAGCTTTGGAGAAGCGGCGGTTCAAGGCTTGGGTGGACCGGCGAAGAGAGACCCAAT
                      ____________________________________________________________
consensus             AATAAGCTTTGGAGAAGCGGCGGTTCAAGGCTTGGGTGGACCGGCGAAGAGAGACCCAAT
 
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JMSF020J04+           GCGGCTTTTGAGACAGGCGTTTAGAAAGATAAAGCTTTGGGGAGAATGGGAGAAGGAGAG
JMSF002D17+           GCGGCTTTTGAGACAGGCGTTTAGAAAGATAAAGCTTTGGGGAGAATGGGAGAAGGAGAG
                      ____________________________________________________________
consensus             GCGGCTTTTGAGACAGGCGTTTAGAAAGATAAAGCTTTGGGGAGAATGGGAGAAGGAGAG
 
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JMSF020J04+           AGGAGGGCTTAGCAAGATACCCGGATATGAGTATTGCAGCCATTGTTGGAATTTTCCGGT
JMSF002D17+           AGGAGGGCTTAGCAAGATACCCGGATATGAGTATTGCAGCCATTGTTGGAATTTTCCGGT
                      ____________________________________________________________
consensus             AGGAGGGCTTAGCAAGATACCCGGATATGAGTATTGCAGCCATTGTTGGAATTTTCCGGT
 
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JMSF020J04+           GAACCGTTGAGGTTGAAGAAGATAAGGCAAAAGCC                         
JMSF002D17+           GAACCGTTGAGGTTGAAGAAGATAAGGCAAAAGCCTATCTTGGGGTCAAAAGAGAAGATC
                      ____________________________________________________________
consensus             GAACCGTTGAGGTTGAAGAAGATAAGGCAAAAGCCTATCTTGGGGTCAAAAGAGAAGATC