| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016K19 | Sequence | 545 | 011868 (7) | ref|XP_006340738.1| | 4e-45 | PREDICTED: calcium-dependent protein kinase 16-like [Solanum tuberosum] | 792 | 008939 (6) | ref|XP_009759436.1| | 7e-84 | PREDICTED: calcium-dependent protein kinase 28-like [Nicotiana sylvestris] |
| JMFF044B11 | Sequence | 620 | 011868 (7) | ref|XP_006340738.1| | 1e-25 | PREDICTED: calcium-dependent protein kinase 16-like [Solanum tuberosum] | 623 | 005447 (8) | ref|XP_010261280.1| | 7e-65 | PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Nelumbo nucifera] |
| JMFF047J14 | Sequence | 619 | 011868 (7) | ref|XP_006340738.1| | 7e-22 | PREDICTED: calcium-dependent protein kinase 16-like [Solanum tuberosum] | 593 | 008939 (6) | ref|XP_009759436.1| | 2e-47 | PREDICTED: calcium-dependent protein kinase 28-like [Nicotiana sylvestris] |
| JMFS154H10 | Sequence | 619 | 011868 (7) | ref|XP_006340738.1| | 2e-35 | PREDICTED: calcium-dependent protein kinase 16-like [Solanum tuberosum] | |||||
| JMSF001P02 | Sequence | 331 | 011868 (7) | 678 | 008939 (6) | ref|XP_009759436.1| | 5e-53 | PREDICTED: calcium-dependent protein kinase 28-like [Nicotiana sylvestris] | |||
| JMSF016M18 | Sequence | 481 | 011868 (7) | 780 | 008939 (6) | ref|XP_009759436.1| | 9e-92 | PREDICTED: calcium-dependent protein kinase 28-like [Nicotiana sylvestris] | |||
| JMSF025L19 | Sequence | 361 | 011868 (7) | 763 | 001082 (7) | ref|XP_009759258.1| | 1e-89 | PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, ch | |||
This contig is upended
. : . : . : . : . : . :
JMFF016K19+ ACCAGTTAAGGCCTTTAATATTTTGACTTCTCGCTTGACATCCT
____________________________________________________________
consensus ACCAGTTAAGGCCTTTAATATTTTGACTTCTCGCTTGACATCCT
. : . : . : . : . : . :
JMFF016K19+ CAACTGCCATGGGAAGAAGCATCTTCTTCTTCTCGATTCTTTTAACAGCAACTCGATCTC
JMFS154H10+ CAACTGCCATGGGAAGAAGCATCTTCTTCTTCTCGATTCTTTTAACAGCAACTCGATCTC
JMFF044B11+ CAGCAACTCGATCTC
____________________________________________________________
consensus CAACTGCCATGGGAAGAAGCATCTTCTTCTTCTCGATTCTTTTAACAGCAACTCGATCTC
. : . : . : . : . : . :
JMFF016K19+ CAACAGACTTGTCAGTAGCAACATAAGTGTATCCAAATTGACCATGTCCCAACAACTTGC
JMFS154H10+ CAACAGACTTGTCAGTAGCAACATAAGTGTATCCAAATTGACCATGTCCCAACAACTTGC
JMFF044B11+ CAACAGACTNGTCAGTAGCAACATAAGTGTATCCAAATTGACCATGTCCCAACAACTTGC
JMFF047J14+ TCAGTAGCAACATAAGTGTATCCAAATTGACCATGTCCCAACAACTTGC
____________________________________________________________
consensus CAACAGACTTGTCAGTAGCAACATAAGTGTATCCAAATTGACCATGTCCCAACAACTTGC
. : . : . : . : . : . :
JMFF016K19+ CAATTGTATACCGCTTATCAAAATCCTTATCATACCCAAAATCCGTTCTTTTCCCGCAAG
JMFS154H10+ CAATTGTATACCGCTTATCAAAATCCTTATCATACCCAAAATCCGTTCTTTTCCCGCAAG
JMSF016M18+ TCCGTTCTTTTCCCGCAAG
JMFF044B11+ CAATTGTATACCGCTTATCAAAATCCTTATCATACCCAAAATCCGTTCTTTTCCCGCAAG
JMFF047J14+ CAATTGTATACCGCTTATCAAAATCCTTATCATACCCAAAATCCGTTCTTTTCCCGCAAG
____________________________________________________________
consensus CAATTGTATACCGCTTATCAAAATCCTTATCATACCCAAAATCCGTTCTTTTCCCGCAAG
. : . : . : . : . : . :
JMFF016K19+ GGATAACCACAGTTTGACTCCTGTGACTGGGCTTAACATTTAAATTCTTATATTTCTCGC
JMFS154H10+ GGATAACCACAGTTTGACTCCTGTGACTGGGCTTAACATTTAAATTCTTATATTTCTCGC
JMSF016M18+ GGATAACCACAGTTTGACTCCTGTGACTGGGCTTAACATTTAAATTCTTATATTTCTCGC
JMFF044B11+ GGATAACCACAGTTTGACTCCTGTGACTGGGCTTAACATTTAAATTCTTATATTTCTCGC
JMFF047J14+ GGATAACCACAGTTTGACTCCTGTGACTGGGCTTAACATTTAAATTCTTATATTTCTCGC
____________________________________________________________
consensus GGATAACCACAGTTTGACTCCTGTGACTGGGCTTAACATTTAAATTCTTATATTTCTCGC
. : . : . : . : . : . :
JMFF016K19+ ATGGTTCTTTAGCCTTCCTTCGATTACAACGTGATCTCTCCTCATCTTGTGCTGATGTGG
JMFS154H10+ ATGGTTCTTTAGCCTTCCTTCGATTACAACGTGATCTCTCCTCATCTTGTGCTGATGTGG
JMSF016M18+ ATGGTTCTTTAGCCTTCCTTCGATTACAACGTGATCTCTCCTCATCTTGTGCTGATGTGG
JMSF025L19+ CCTCATCTTGTGCTGATGTGG
JMFF044B11+ ATGGTTCTTTAGCCTTCCTTCGATTACAACGTGATCTCTCCTCATCTTGTGCTGATGTGG
JMFF047J14+ ATGGTTCTTTAGCCTTCCTTCGATTACAACGTGATCTCTCCTCATCTTGTGCTGATGTGG
____________________________________________________________
consensus ATGGTTCTTTAGCCTTCCTTCGATTACAACGTGATCTCTCCTCATCTTGTGCTGATGTGG
. : . : . : . : . : . :
JMFF016K19+ CAGTGGTGTCAGACCGCGGCTTTGCGGTGGGATTGCTGTTGCTGTTGGAGCCACTAACTT
JMFS154H10+ CAGTGGTGTCAGACCGCGGCTTTGCGGTGGGATTGCTGTTGCTGTTGGAGCCACTAACTT
JMSF016M18+ CAGTGGTGTCAGACCGCGGCTTTGCGGTGGGATTGCTGTTGCTGTTGGAGCCACTAACTT
JMSF025L19+ CAGTGGTGTCAGACCGCGGCTTTGCGGTGGGATTGCTGTTGCTGTTGGAGCCACTAACTT
JMFF044B11+ CAGTGGTGTCAGACCGCGGCTTTGCGGTGGGATTGCTGTTGCTGTTGGAGCCACTAACTT
JMFF047J14+ CAGTGGTGTCAGACCGCGGCTTTGCGGTGGGATTGCTGTTGCTGTTGGAGCCACTAACTT
____________________________________________________________
consensus CAGTGGTGTCAGACCGCGGCTTTGCGGTGGGATTGCTGTTGCTGTTGGAGCCACTAACTT
. : . : . : . : . : . :
JMFF016K19+ TTGAGCTCGAAAGGCATATACCCATTTCCCCAAATATGGATATGGATAAAACCCAAAGTT
JMFS154H10+ TTGAGCTCGAAAGGCATATACCCATTTCCCCAAATATGGATATGGATAAAACCCAAAGTT
JMSF016M18+ TTGAGCTCGAAAGGCATATACCCATTTCCCCAAATATGGATATGGATAAAACCCAAAGTT
JMSF025L19+ TTGAGCTCGAAAGGCATATACCCATTTCCCCAAATATGGATATGGATAAAACCCAAAGTT
JMFF044B11+ TTGAGCTCGAAAGGCATATACCCATTTCCCCAAATATGGATATGGATAAAACCCAAAGTT
JMFF047J14+ TTGAGCTCGAAAGGCATATACCCATTTCCCCAAATATGGATATGGATAAAACCCAAAGTT
JMSF001P02+ CCAAGTATGGATATGGATAAAACCCAAAGTT
____________________________________________________________
consensus TTGAGCTCGAAAGGCATATACCCATTTCCCCAAATATGGATATGGATAAAACCCAAAGTT
. : . : . : . : . : . :
JMFF016K19+ TTCTTCAGATTCTTTGACGGATCAGAAGGTTCACAAGCATAAGATGATGATTCAACAAAA
JMFS154H10+ TTCTTCAGATTCTTTGACGGATCAGAAGGTTCACAAGCATAAGATGATGATTCAACAAAA
JMSF016M18+ TTCTTCAGATTCTTTGACGGATCAGAAGGTTCACAAGCATAAGATGATGATTCAACAAAA
JMSF025L19+ TTCTTCAGATTCTTTGACGGATCAGAAGGTTCACAAGCATAAGATGATGATTCAACAAAA
JMFF044B11+ TTCTTCAGATTCTTTGACGGATCAGAAGGTTCACAAGCATAAGATGATGATTCAACAAAA
JMFF047J14+ TTCTTCAGATTCTTTGACGGATCAGAAGGTTCACAAGCATAAGATGATGATTCAACAAAA
JMSF001P02+ TTCTTCAGATTCTTTGACGGATCAGAAGGTTCACAAGCATAAGATGATGATTCAACAAAA
____________________________________________________________
consensus TTCTTCAGATTCTTTGACGGATCAGAAGGTTCACAAGCATAAGATGATGATTCAACAAAA
. : . : . : . : . : . :
JMFF016K19+ TATGGGAAATGATCATTATAC
JMFS154H10+ TATGGGAAATGATCATTATACACAAAAATAAAAGGGCGAATGGAGAATCAACTCCGCGTC
JMSF016M18+ TATGGGAAATGATCATTATACACAAAAATAAAAGGGCGAATGGAGAATCAACTCCGCGTC
JMSF025L19+ TATGGGAAATGATCATTATACACAAAAATAAAAGGGCGAATGGAGAATCAACTCCGCGTC
JMFF044B11+ TATGGGAAATGATCATTATACACAAAAATAAAAGGGCGAATGGAGAATCAACTCCGCGTC
JMFF047J14+ TATGGGAAATGATCATTATACACAAAAATAAAAGGGCGAATGGAGAATCAACTCCGCGTC
JMSF001P02+ TATGGGAAATGATCATTATACACAAAAATAAAAGGGCGAATGGAGAATCAACTCCGCGTC
____________________________________________________________
consensus TATGGGAAATGATCATTATACACAAAAATAAAAGGGCGAATGGAGAATCAACTCCGCGTC
. : . : . : . : . : . :
JMFS154H10+ CGTTTATACCAAAGTGAGAATTTAGGAGGAAGGTATGGTGGAGCAGCCAAGGAGGAAGAA
JMSF016M18+ CGTTTATACCAAAGTGAGAATTTAGGAGGAAGGTATGGTGGAGCAGCCAAGGAGGAAGAA
JMSF025L19+ CGTTTATACCAAAGTGAGAATTTAGGAGGAAGGTATGGTGGAGCAGCCAAGGAGGAAGAA
JMFF044B11+ CGTTTATACCAAAGTGAGAATTTAGGAGGAAGGTATGGTGGAGCAGCCAAGGAGGAAGAA
JMFF047J14+ CGTTTATACCAAAGTGAGAATTTAGGAGGAAGGTATGGTGGAGCAGCCAAGGAGGAAGAA
JMSF001P02+ CGTTTATACCAAAGTGAGAATTTAGGAGGAAGGTATGGTGGAGCAGCCAAGGAGGAAGAA
____________________________________________________________
consensus CGTTTATACCAAAGTGAGAATTTAGGAGGAAGGTATGGTGGAGCAGCCAAGGAGGAAGAA
. : . : . : . : . : . :
JMFS154H10+ GAGAAGAAGTTGCTGACTT
JMSF016M18+ GAGAAGAAGTTGCTGACTTGCTGGTCAAAATAGACTTT
JMSF025L19+ GAGAAGAAGTTGCTGACTTGCTGGTCAAAATAGACTTT
JMFF044B11+ GAGAAGAAGTTGCTGACTTGCTGGTCAAAATAGACTTTAGAGGAGACAGCAGAAGCCCGT
JMFF047J14+ GAGAAGAAGTTGCTGACTTGCTGGTCAAAATAGACTTTAGAGGAGACAGCAGAAGCCCGT
JMSF001P02+ GAGAAGAAGTTGCTGACTTGCTGGTCAAAATAGACTTTAGAGGAGACAGCAGAAGCCCGT
____________________________________________________________
consensus GAGAAGAAGTTGCTGACTTGCTGGTCAAAATAGACTTTAGAGGAGACAGCAGAAGCCCGT
. : . : . : . : . : . :
JMFF044B11+ TCCC
JMFF047J14+ TCCCGAAGGTGATCCCCTGCAGGGGTTT
JMSF001P02+ TCCCGAAGGTGATCCCCTGCAGGGGTTTGCCTGAAGAACCTCCAAATTTCTTTCTTTTCC
____________________________________________________________
consensus TCCCGAAGGTGATCCCCTGCAGGGGTTTGCCTGAAGAACCTCCAAATTTCTTTCTTTTCC