Contig 011840:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS128B05Sequence516011840 (2)
JMSF051C03Sequence288020120203011840 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS128B05+ AAGGTTTGCTGATCAGTCATTCCACCTGAAGAATGAA
                      ____________________________________________________________
consensus AAGGTTTGCTGATCAGTCATTCCACCTGAAGAATGAA
 
. : . : . : . : . : . :
JMFS128B05+ GAAGAGTTTCCACCCCTGCCCATGTGAGAGAGAGTTCTAGGAAAGAAGTAAAAAAAACTT
                      ____________________________________________________________
consensus GAAGAGTTTCCACCCCTGCCCATGTGAGAGAGAGTTCTAGGAAAGAAGTAAAAAAAACTT
 
. : . : . : . : . : . :
JMFS128B05+ GTATACCTGCTGAGAAAATAGAGAAATAGAAAAATAGAAAAATAGTAGCTGCTAACAAAC
                      ____________________________________________________________
consensus GTATACCTGCTGAGAAAATAGAGAAATAGAAAAATAGAAAAATAGTAGCTGCTAACAAAC
 
. : . : . : . : . : . :
JMFS128B05+ CATAAAAACCTTAGGTGGTCTCTCAAAAGCTCCTTGAGAAGCATAGATACTGCATAAAAC
                      ____________________________________________________________
consensus CATAAAAACCTTAGGTGGTCTCTCAAAAGCTCCTTGAGAAGCATAGATACTGCATAAAAC
 
. : . : . : . : . : . :
JMFS128B05+ TTGAGAGATTATTATTTTXXXXXXXXXXXXXXXXXXXXXXXXTCTTGAGAGATTATTAAC
                      ____________________________________________________________
consensus TTGAGAGATTATTATTTTNNNNNNNNNNNNNNNNNNNNNNNNTCTTGAGAGATTATTAAC
 
. : . : . : . : . : . :
rJMSF051C03+ TTTTTTNTTTTTTTTTTCTTNNTCATTTTCTCTTGTT
JMFS128B05+ CCTTTTTCTTCAGTATATTTAGGTTTTTTTTTTTTTTTTTCTTTTTCATTTTCTCTTGTT
                      ____________________________________________________________
consensus CCTTTTTCTTCAGTATATTTAGGTTTTTTTTTTTTTTTTTCTTTTTCATTTTCTCTTGTT
 
. : . : . : . : . : . :
rJMSF051C03+ TGGTAACGTTATGTACAAATCTTGGATGCTTTTCTATTCGTCCAAAGGGGGGAAGAAAAA
JMFS128B05+ TGGTAACGTTATGTACAAA-CTTGGATGCTTTTCTATTCGTCCAAAGGGGGGAAGAAAAA
                      ____________________________________________________________
consensus TGGTAACGTTATGTACAAATCTTGGATGCTTTTCTATTCGTCCAAAGGGGGGAAGAAAAA
 
. : . : . : . : . : . :
rJMSF051C03+ GAAAGAAAAT
JMFS128B05+ GAAAGAAAATTGTTGTAGTAAGACTGATTTAGATTCGGTTGCATCTACAGAGTTTGACTC
                      ____________________________________________________________
consensus GAAAGAAAATTGTTGTAGTAAGACTGATTTAGATTCGGTTGCATCTACAGAGTTTGACTC
 
. : . : . : . : . : . :
JMFS128B05+ TTCTTCAAAACAAGGATTTTTGTTTATTTATTTATATTTAAATCTTGCACCGCTATTAAC
                      ____________________________________________________________
consensus TTCTTCAAAACAAGGATTTTTGTTTATTTATTTATATTTAAATCTTGCACCGCTATTAAC