Contig 011827:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004K04Sequence524011827 (8)gb|KJB27320.1|1e-88hypothetical protein B456_004G2909001, partial [Gossypium raimondii]640012500 (3)ref|XP_009785704.1|4e-47PREDICTED: beta-adaptin-like protein A [Nicotiana sylvestris]
JMFF029M06Sequence544011827 (8)gb|KJB27320.1|1e-88hypothetical protein B456_004G2909001, partial [Gossypium raimondii]625012500 (3)ref|XP_009785704.1|6e-41PREDICTED: beta-adaptin-like protein A [Nicotiana sylvestris]
JMFS038E02Sequence641011827 (8)gb|KJB27320.1|8e-118hypothetical protein B456_004G2909001, partial [Gossypium raimondii]
JMFS076F03Sequence608011827 (8)gb|KJB27320.1|5e-119hypothetical protein B456_004G2909001, partial [Gossypium raimondii]
JMFS118B05Sequence627011827 (8)gb|KJB27320.1|7e-105hypothetical protein B456_004G2909001, partial [Gossypium raimondii]
JMFS139A11Sequence626011827 (8)gb|KJB27320.1|1e-112hypothetical protein B456_004G2909001, partial [Gossypium raimondii]
JMFS160F06Sequence612011827 (8)gb|KJB27320.1|1e-111hypothetical protein B456_004G2909001, partial [Gossypium raimondii]
JMSF002I18Sequence365011827 (8)ref|XP_011089076.1|5e-42PREDICTED: LOW QUALITY PROTEIN: beta-adaptin-like protein A [Sesamum indicum]476012500 (3)ref|XP_009785704.1|1e-22PREDICTED: beta-adaptin-like protein A [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS076F03+ TGGGTCATTAAGCATCAATTGCTTAAG
JMFS038E02+ TCATTAAGCATCAATGNCTTAAG
                      ____________________________________________________________
consensus TGGGTCATTAAGCATCAATTGCTTAAG
 
. : . : . : . : . : . :
JMFS076F03+ TAATGTGGGAAAATCGGCATCCACACAAGTTGAAGCAGAGATATGGTACAACTTCAAGAC
JMFS038E02+ TAATGTGGGAAAATCGGCATCCACACAAGTTGAAGCAGAGATATGGTACAACTTCAAGAC
JMFS160F06+ ATCGGCATCCACACAAGTTGAAGCAGAGATATGGTACAACTTCAAGAC
JMFS139A11+ ATCGGCATCCACACAAGTTGAAGCAGAGATATGGTACAACTTCAAGAC
JMFS118B05+ AGCAGAGATATGGTACAACTTCAAGAC
                      ____________________________________________________________
consensus TAATGTGGGAAAATCGGCATCCACACAAGTTGAAGCAGAGATATGGTACAACTTCAAGAC
 
. : . : . : . : . : . :
JMFS076F03+ ACCTATTGCAGCAACTGTCCTTACATAACTATTTGAATCCTTCAACCCTGAACCCAATGG
JMFS038E02+ ACCTATTGCAGCAACTGTCCTTACATAACTATTTGAATCCTTCAACCCTGAACCCAATGG
JMFS160F06+ ACCTATTGCAGCAACTGTCCTTACATAACTATTTGAATCCTTCAACCCTGAACCCAATGG
JMFS139A11+ ACCTATTGCAGCAACTGTCCTTACATAACTATTTGAATCCTTCAACCCTGAACCCAATGG
JMFF029M06+ AACCCAATGG
JMFF004K04+ AACCCAATGG
JMFS118B05+ ACCTATTGCAGCAACTGTCCTTACATAACTATNTGAATCCTTCAACCCTGAACCCAATGG
                      ____________________________________________________________
consensus ACCTATTGCAGCAACTGTCCTTACATAACTATTTGAATCCTTCAACCCTGAACCCAATGG
 
. : . : . : . : . : . :
JMFS076F03+ TCCAACCAAGTACTCCACCAAATTTGCCACTCGAAGTGAACACAAACTCCTGAGAGCCAA
JMFS038E02+ TCCAACCAAGTACTCCACCAAATTTGCCACTCGAAGTGAACACAAACTCCTGAGAGCCAA
JMFS160F06+ TCCAACCAAGTACTCCACCAAATTTGCCACTCGAAGTGAACACAAACTCCTGAGAGCCAA
JMFS139A11+ TCCAACCAAGTACTCCACCAAATTTGCCACTCGAAGTGAACACAAACTCCTGAGAGCCAA
JMFF029M06+ TCCAACCAAGTACTCCACCAAATTTGCCACTCGAAGTGAACACAAACTCCTGAGAGCCAA
JMFF004K04+ TCCAACCAAGTACTCCACCAAATTTGCCACTCGAAGTGAACACAAACTCCTGAGAGCCAA
JMFS118B05+ TCCAACCAAGTACTCCACCAAATTTGCCACTCGAAGTGAACACAAACTCCTGAGAGCCAA
                      ____________________________________________________________
consensus TCCAACCAAGTACTCCACCAAATTTGCCACTCGAAGTGAACACAAACTCCTGAGAGCCAA
 
. : . : . : . : . : . :
JMFS076F03+ ACCCCTAATCATTGGGTCCTCATCCTTACAGTCCCTCTGGAGAAAATTTATCGTCAAAAG
JMFS038E02+ ACCCCTAATCATTGGGTCCTCATCCTTACAGTCCCTCTGGAGAAAATTTATCGTCAAAAG
JMFS160F06+ ACCCCTAATCATTGGGTCCTCATCCTTACAGTCCCTCTGGAGAAAATTTATCGTCAAAAG
JMFS139A11+ ACCCCTAATCATTGGGTCCTCATCCTTACAGTCCCTCTGGAGAAAATTTATCGTCAAAAG
JMFF029M06+ ACCCCTAATCATTGGGTCCTCATCCTTACAGTCCCTCTGGAGAAAATTTATCGTCAAAAG
JMFF004K04+ ACCCCTAATCATTGGGTCCTCATCCTTACAGTCCCTCTGGAGAAAATTTATCGTCAAAAG
JMFS118B05+ ACCCCTAATCATTGGGTCCTCATCCTTACAGTCCCTCTGGAGAAAATTTATCGTCAAAAG
                      ____________________________________________________________
consensus ACCCCTAATCATTGGGTCCTCATCCTTACAGTCCCTCTGGAGAAAATTTATCGTCAAAAG
 
. : . : . : . : . : . :
JMFS076F03+ TGCAAGATCAGGATTATTCTTTGCATAGTTCCCAACATACAGGTAACACATCTTTTTTAG
JMFS038E02+ TGCAAGATCAGGATTATTCTTTGCATAGTTCCCAACATACAGGTAACACATCTTTTTTAG
JMFS160F06+ TGCAAGATCAGGATTATTCTTTGCATAGTTCCCAACATACAGGTAACACATCTTTTTTAG
JMFS139A11+ TGCAAGATCAGGATTATTCTTTGCATAGTTCCCAACATACAGGTAACACATCTTTTTTAG
JMSF002I18+ AACACATCTTTTTTAG
JMFF029M06+ TGCAAGATCAGGATTATTCTTTGCATAGTTCCCAACATACAGGTAACACATCTTTTTTAG
JMFF004K04+ TGCAAGATCAGGATTATTCTTTGCATAGTTCCCAACATACAGGTAACACATCTTTTTTAG
JMFS118B05+ TGCAAGATCAGGATTATTCTTTGCATAGTTCCCAACATACAGGTAACACATCTTTTTTAG
                      ____________________________________________________________
consensus TGCAAGATCAGGATTATTCTTTGCATAGTTCCCAACATACAGGTAACACATCTTTTTTAG
 
. : . : . : . : . : . :
JMFS076F03+ CACAATGTCCGAGGTCGCTGAGCACATAACCATTTCACTAAAAACCGATGACACATCAAT
JMFS038E02+ CACAATGTCCGAGGTCGCTGAGCACATAACCATTTCACTAAAAACCGATGACACATCAAT
JMFS160F06+ CACAATGTCCGAGGTCGCTGAGCACATAACCATTTCACTAAAAACCGATGACACATCAAT
JMFS139A11+ CACAATGTCCGAGGTCGCTGAGCACATAACCATTTCACTAAAAACCGATGACACATCAAT
JMSF002I18+ CACAATGTCCGAGGTNGCTGAGCACATAACCATTTCACTAAAAACCGATGACACATCAAT
JMFF029M06+ CACAATGTCCGAGGTCGCTGAGCACATAACCATTTCACTAAAAACCGATGACACATCAAT
JMFF004K04+ CACAATGTCCGAGGTCGCTGAGCACATAACCATTTCACTAAAAACCGATGACACATCAAT
JMFS118B05+ CACAATGTCCGAGGTCGCTGAGCACATAACCATTTCACTAAAAACCGATGACACATCAAT
                      ____________________________________________________________
consensus CACAATGTCCGAGGTCGCTGAGCACATAACCATTTCACTAAAAACCGATGACACATCAAT
 
. : . : . : . : . : . :
JMFS076F03+ CCCAATCGTCATGTATGAGATAACCTTCTTGAATAGCTCTCTCTTTGAATCATCAGCCCC
JMFS038E02+ CCCAATCGTCATGTATGAGATAACCTTCTTGAATAGCTCTCTCTTTGAATCATCAGCCCC
JMFS160F06+ CCCAATCGTCATGTATGAGATAACCTTCTTGAATAGCTCTCTCTTTGAATCATCAGCCCC
JMFS139A11+ CCCAATCGTCATGTATGAGATAACCTTCTTGAATAGCTCTCTCTTTGAATCATCAGCCCC
JMSF002I18+ CCCNATCGTCATGTATGAGATAACCTTCTTGAATAGCTCTCTCTTTGAATCATCAGCCCC
JMFF029M06+ CCCAATCGTCATGTATGAGATAACCTTCTTGAATAGCTCTCTCTTTGAATCATCAGCCCC
JMFF004K04+ CCCAATCGTCATGTATGAGATAACCTTCTTGAATAGCTCTCTCTTTGAATCATCAGCCCC
JMFS118B05+ CCCAATCGTCATGTATGAGATAACCTTCTTGAATAGCTCTCTCTTTGAATCATCAGCCCC
                      ____________________________________________________________
consensus CCCAATCGTCATGTATGAGATAACCTTCTTGAATAGCTCTCTCTTTGAATCATCAGCCCC
 
. : . : . : . : . : . :
JMFS076F03+ AGGCGCTCGGCTCCCTGCCAGCTGACGAAGCTGCATTTTCAAATCTGAGACCTCCCCTTT
JMFS038E02+ AGGCGCTCGGCTCCCTGCCAGCTGACGAAGCTGCATTTTCAAATCTGAGACCTCCCCTTT
JMFS160F06+ AGGCGCTCGGCTCCCTGCCAGCTGACGAAGCTGCATTTTCAAATCTGAGACCTCCCCTTT
JMFS139A11+ AGGCGCTCGGCTCCCTGCCAGCTGACGAAGCTGCATTTTCAAATCTGAGACCTCCCCTTT
JMSF002I18+ AGGCGCTCGGCTCCNTGCCAGCTGACGAAGCTGCATTTTCAAATNTGAGACCTCCCCTTT
JMFF029M06+ AGGCGCTCGGCTCCCTGCCAGCTGACGAAGCTGCATTTTCAAATCTGAGACCTCCCCTTT
JMFF004K04+ AGGCGCTCGGCTCCCTGCCAGCTGACGAAGCTGCATTTTCAAATCTGAGACCTCCCCTTT
JMFS118B05+ AGGCGCTCGGCTCCCTGCCAGCTGACGAAGCTGCATTTTCAAATCTGAGACCTCCCCTTT
                      ____________________________________________________________
consensus AGGCGCTCGGCTCCCTGCCAGCTGACGAAGCTGCATTTTCAAATCTGAGACCTCCCCTTT
 
. : . : . : . : . : . :
JMFS076F03+ CCCGGAAGGTTGAGAAGGAGAAGGCGATCGCTGAGCATTAGCTGGAGGAGCCATGTT-AA
JMFS038E02+ CCCGGAAGGTTGAGAAGGAGAAGGCGATCGCTGAGCATTAGCTGGAGGAGCCATGTTGAA
JMFS160F06+ CCCGGAAGGTTGAGAAGGAGAAGGCGATCGCTGAGCATTAGCTGGAGGAGCCATGTTGAA
JMFS139A11+ CCCGGAAGGTTGAGAAGGAGAAGGCGATCGCTGAGCATTAGCTGGAGGAGCCATGTTGAA
JMSF002I18+ CCCGGAAGGTTGAGAAGGAGAAGGCGATCGCTGAGCATTAGCTGGAGGAGCCATGNTGAA
JMFF029M06+ CCCGGAAGGTTGAGAAGGAGAAGGCGATCGCTGAGCATTAGCTGGAGGAGCCATGTTGAA
JMFF004K04+ CCCGGAAGGTTGAGAAGGAGAAGGCGATCGCTGAGCATTAGCTGGAGGAGCCATGTTGAA
JMFS118B05+ CCCGGAAGGTTGAGAAGGAGAAGGCGATCGCTGAGCATTAGCTGGAGGAGCCATGTTGAA
                      ____________________________________________________________
consensus CCCGGAAGGTTGAGAAGGAGAAGGCGATCGCTGAGCATTAGCTGGAGGAGCCATGTTGAA
 
. : . : . : . : . : . :
JMFS076F03+ GTCTCAACAGTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
JMFS038E02+ GTCTCAACAGTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCTCTGGCGATTA
JMFS160F06+ GTCTCAACAGTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCTCTGGCGATTA
JMFS139A11+ GTCTCAACAGTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCTCTGGCGATTA
JMSF002I18+ GTCTCAACAGTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCTCTGGCGATTA
JMFF029M06+ GTCTCAACAGTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCTCTGGCGATTA
JMFF004K04+ GTCTCAACAGTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCTCTGGCGATTA
JMFS118B05+ GTCTCAACAGTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCTCTGGCGATTA
                      ____________________________________________________________
consensus GTCTCAACAGTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCTCTGGCGATTA
 
. : . : . : . : . : . :
JMFS038E02+ TGATTGGAATGGATCTCT
JMFS160F06+ TGATTGGAATGGATCTCTGTCGTG
JMFS139A11+ TGATTGGAATGGATCTCTGTCGTGCTGCCAAATC
JMSF002I18+ TGATTGGAATGGATCTCNGTCGTGCTGCCAAATCGACAACAAACGA
JMFF029M06+ TGATTGGAATGGATCTCTGTCGTGCTGCCAAATCGACAACAAACGA
JMFF004K04+ TGATTGGAATGGATCTCTGTCGTGCTGCCAAATC
JMFS118B05+ TGATTGGAATGGATCTCTGTCGTGCTGCCAAATCGACAACAAACGATTGAATCTGAAACC
                      ____________________________________________________________
consensus TGATTGGAATGGATCTCTGTCGTGCTGCCAAATCGACAACAAACGATTGAATCTGAAACC