Contig 011823:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051B23Sequence630011823 (20)502006227 (9)dbj|BAE71241.1|6e-25putative Argonaute protein [Trifolium pratense]
JMFS008D05Sequence599011823 (20)gb|ABC61502.1|2e-100AGO1-1, partial [Nicotiana benthamiana]
JMFS067A06Sequence619011823 (20)gb|EPS70198.1|2e-117hypothetical protein M569_04564, partial [Genlisea aurea]
JMFS071B06Sequence597011823 (20)ref|XP_009793489.1|207PREDICTED: protein argonaute 1B-like isoform X3 [Nicotiana sylvestris]
JMFS079B10Sequence615011823 (20)gb|ABC61502.1|2e-94AGO1-1, partial [Nicotiana benthamiana]
JMFS079E08Sequence553011823 (20)
JMFS081C06Sequence507011823 (20)
JMFS088F10Sequence539011823 (20)emb|CDO98607.1|5e-05unnamed protein product [Coffea canephora]
JMFS095G09Sequence454011823 (20)
JMFS102B11Sequence560011823 (20)ref|XP_009606253.1|8e-04PREDICTED: protein argonaute 1-like isoform X3 [Nicotiana tomentosiformis]
JMFS104G11Sequence598011823 (20)emb|CDO98607.1|2e-05unnamed protein product [Coffea canephora]
JMFS108E01Sequence522011823 (20)
JMFS110B02Sequence655011823 (20)
JMFS124D11Sequence573011823 (20)gb|ABC61502.1|1e-85AGO1-1, partial [Nicotiana benthamiana]
JMFS128B11Sequence617011823 (20)gb|KDO41885.1|1e-128hypothetical protein CISIN_1g0014662mg, partial [Citrus sinensis] gb|KDO41886.1|
JMFS146E11Sequence604011823 (20)
JMFS148B06Sequence391011823 (20)
JMFS156B02Sequence256011823 (20)
JMFS156C04Sequence400011823 (20)
JMSF032H24Sequence708011823 (20)emb|CDO98607.1|6e-09unnamed protein product [Coffea canephora]631006227 (9)gb|KDO41892.1|2e-103hypothetical protein CISIN_1g0014661mg, partial [Citrus sinensis] gb|KDO41893.1|

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS067A06+ TGCACACCTCCATTGGCA
                      ____________________________________________________________
consensus TGCACACCTCCATTGGCA
 
. : . : . : . : . : . :
JMFS067A06+ AGTAATTAGCCCTCTGCTGATTCCCAACTTGTAGACATGGCCATTGAGTATGCTGAATGA
                      ____________________________________________________________
consensus AGTAATTAGCCCTCTGCTGATTCCCAACTTGTAGACATGGCCATTGAGTATGCTGAATGA
 
. : . : . : . : . : . :
JMFS067A06+ CAAAACCATAAGTCTCACGGAAGTATTCAACAACAGATTTAGTTGTACCCATCTCATCAA
                      ____________________________________________________________
consensus CAAAACCATAAGTCTCACGGAAGTATTCAACAACAGATTTAGTTGTACCCATCTCATCAA
 
. : . : . : . : . : . :
JMFS067A06+ CAGGAAAGGTCAGCTCCCTTGTTGCTTGTGAAGTCAGACCAGAGATTCGATACTTCCTCC
                      ____________________________________________________________
consensus CAGGAAAGGTCAGCTCCCTTGTTGCTTGTGAAGTCAGACCAGAGATTCGATACTTCCTCC
 
. : . : . : . : . : . :
JMFS067A06+ GCATGTTACCACGATGAGTAACCTCTACCTTCACACCTCTTAAAGCTTTCTTAATCTTCA
JMFS128B11+ TCA
                      ____________________________________________________________
consensus GCATGTTACCACGATGAGTAACCTCTACCTTCACACCTCTTAAAGCTTTCTTAATCTTCA
 
. : . : . : . : . : . :
JMFS067A06+ CTCTGTCAGAATCAGACAAAGGTCTAGATGACACATCCCTATTCAGAAGCTGGGTTACAA
JMFS128B11+ CTCTGTCAGAATCAGACAAAGGTCTAGATGACACATCCCTATTCAGAAGCTGGGTTACAA
                      ____________________________________________________________
consensus CTCTGTCAGAATCAGACAAAGGTCTAGATGACACATCCCTATTCAGAAGCTGGGTTACAA
 
. : . : . : . : . : . :
JMFS067A06+ AATCAATGACAGGTAGGGGCTCAATAAAAGCTGTGGATGACATATCTATATTCAACGATA
JMFS128B11+ AATCAATGACAGGTAGGGGCTCAATAAAAGCTGTGGATGACATATCTATATTCAACGATA
                      ____________________________________________________________
consensus AATCAATGACAGGTAGGGGCTCAATAAAAGCTGTGGATGACATATCTATATTCAACGATA
 
. : . : . : . : . : . :
JMFS067A06+ AACCCATCTGAGTAGGGCGAATGCTTTGGTAAAAACCACGCCAGCTTTCTAGACCTTCAC
JMFS128B11+ AACCCATCTGAGTAGGGCGAATGCTTTGGTAAAAACCACGCCAGCTTTCTAGACCTTCAC
                      ____________________________________________________________
consensus AACCCATCTGAGTAGGGCGAATGCTTTGGTAAAAACCACGCCAGCTTTCTAGACCTTCAC
 
. : . : . : . : . : . :
JMFS067A06+ CCAATGGCTGCCTACGCCCTAGATTTGGGGAATAGAAGGACCGGCCCACTGGGCAATACC
JMFS128B11+ CCAATGGCTGCCTACGCCCTAGATTTGGGGAATAGAAGGACCGGCCCACTGGGCAATACC
                      ____________________________________________________________
consensus CCAATGGCTGCCTACGCCCTAGATTTGGGGAATAGAAGGACCGGCCCACTGGGCAATACC
 
. : . : . : . : . : . :
JMFS067A06+ TAGATGTAGGGAGTTCTCGCAAAACAATATCTAAAACCTGAA
JMFS128B11+ TAGATGTAGGGAGTTCTCGCAAAACAATATCTAAAACCTGAAGTGCTTCTTGAGGTGCAT
JMFS008D05+ ATCTAAAACCTGAAGTGCTTCTTGAGGTGCAT
JMFS079B10+ GCAT
                      ____________________________________________________________
consensus TAGATGTAGGGAGTTCTCGCAAAACAATATCTAAAACCTGAAGTGCTTCTTGAGGTGCAT
 
. : . : . : . : . : . :
JMFS128B11+ CTGCCTGCCTGCCTTGTAGAAACATTCCCAAATGATGAAGATCAGCCCGTGATGCCAACT
JMFS008D05+ CTGCCTGCCTGCCTTGTAGAAACATTCCCAAATGATGAAGATCAGCCCGTGATGCCAACT
JMFS124D11+ AAACATTCCCAAATGATGAAGATCAGCCCGTGATGCCAACT
JMFS079B10+ CTGCCTGCCTGCCTTGTAGAAACATTCCCAAATGATGAAGATCAGCCCGTGATGCCAACT
                      ____________________________________________________________
consensus CTGCCTGCCTGCCTTGTAGAAACATTCCCAAATGATGAAGATCAGCCCGTGATGCCAACT
 
. : . : . : . : . : . :
JMFS128B11+ TTATCACAACTTTAAATTCTTTCTCTCTCCTGGCACCACCTGACTTATCTTCATCATCAA
JMFS008D05+ TTATCACAACTTTAAATTCTTTCTCTCTCCTGGCACCACCTGACTTATCTTCATCATCAA
JMFS124D11+ TTATCACAACTTTAAATTCTTTCTCTCTCCTGGCACCACCTGACTTATCTTCATCATCAA
JMFS079B10+ TTATCACAACTTTAAATTCTTTCTCTCTCCTGGCACCACCTGACTTATCTTCATCATCAA
                      ____________________________________________________________
consensus TTATCACAACTTTAAATTCTTTCTCTCTCCTGGCACCACCTGACTTATCTTCATCATCAA
 
. : . : . : . : . : . :
JMFS128B11+ TTAGAGTAATTCTGAACTCTTTAGAAACAAAAGGGAGAGGACCTGCAGTGTACAGGCTCT
JMFS008D05+ TTAGAGTAATTCTGAACTCTTTAGAAACAAAAGGGAGAGGACCTGCAGTGTACAGGCTCT
JMFS124D11+ TTAGAGTAATTCTGAACTCTTTAGAAACAAAAGGGAGAGGACCTGCAGTGTACAGGCTCT
JMFS079B10+ TTAGAGTAATTCTGAACTCTTTAGAAACAAAAGGGAGAGGACCTGCAGTGTACAGGCTCT
JMFS071B06+ GGACCTGCAGTGTACAGGCTCT
                      ____________________________________________________________
consensus TTAGAGTAATTCTGAACTCTTTAGAAACAAAAGGGAGAGGACCTGCAGTGTACAGGCTCT
 
. : . : . : . : . : . :
JMFS128B11+ TCCTTCCATCATATGCTGGAAGCCTCTTTCCCAGATGAGATTCTCTGTACGTTCTAACCA
JMFS008D05+ TCCTTCCATCATATGCTGGAAGCCTCTTTCCCAGATGAGATTCTCTGTACGTTCTAACCA
JMFS124D11+ TCCTTCCATCATATGCTGGAAGCCTCTTTCCCAGATGAGATTCTCTGTACGTTCTAACCA
JMFS079B10+ TCCTTCCATCATATGCTGGAAGCCTCTTTCCCAGATGAGATTCTCTGTACGTTCTAACCA
JMFS071B06+ TCCTTCCATCATATGCTGGAAGCCTCTTTCCCAGATGAGATACTCTGTACGTTCTAACCA
                      ____________________________________________________________
consensus TCCTTCCATCATATGCTGGAAGCCTCTTTCCCAGATGAGATTCTCTGTACGTTCTAACCA
 
. : . : . : . : . : . :
JMFS128B11+ GTTGATCCATAACTGCACGATTAACACCTCGAGAAGCAACTTCCGGGGTGATTGAAACAT
JMFS008D05+ GTTGATCCATAACTGCACGATTAACACCTCGAGAAGCAACTTCCGGGGTGATTGAAACAT
JMFS124D11+ GTTGATCCATAACTGCACGATTAACACCTCGAGAAGCAACTTCCGGGGTGATTGAAACAT
JMFS079B10+ GTTGATCCATAACTGCACGATTAACACCTCGAGAAGCAACTTCCGGGGTGATTGAAACAT
JMFS071B06+ GTTGATCCATATCTGCACGATTAACACCTCGAGAAGCAACTTCCGGGGTGATTGAAACAT
                      ____________________________________________________________
consensus GTTGATCCATAACTGCACGATTAACACCTCGAGAAGCAACTTCCGGGGTGATTGAAACAT
 
. : . : . : . : . : . :
JMFS128B11+ CATACTGGTGCAAG
JMFS008D05+ CATACTGGTGCAAGTCCTTATCAGGCAGCTCAGCAAAGAAGTGGTTAGCCTTCACCATGC
JMFS124D11+ CATACTGGTGCAAGTCCTTATCAGGCAGCTCAGCAAAGAAGTGGTTAGCCTTCACCATGC
JMFS079B10+ CATACTGGTGCAAGTCCTTATCAGGCAGCTCAGCAAAGAAGTGGTTAGCCTTCACCATGC
JMFS071B06+ CATACTGGTGCAAGTCCTTATCAGGCAGCTCAGCAAAGAAGTGGTTAGCCTTCACCATGC
                      ____________________________________________________________
consensus CATACTGGTGCAAGTCCTTATCAGGCAGCTCAGCAAAGAAGTGGTTAGCCTTCACCATGC
 
. : . : . : . : . : . :
JMFS008D05+ ACCTGGTGCCACTCTTTCCAGGTCCTGGGCGAAGAGGAAATCTCATTGACTTGCTGGATG
JMFS124D11+ ACCTGGTGCCACTCTTTCCAGGTCCTGGGCGAAGAGGAAATCTCATTGACTTGCTGGATG
JMFS079B10+ ACCTGGTGCCACTCTTTCCAGGTCCTGGGCGAAGAGGAAATCTCATTGACTTGCTGGATG
JMFS071B06+ ACCTGGTGCCACTCTTTCCAGGTCCTGGGCGAAGAGGAAATCTCATTGACTTGCTGGATG
JMSF032H24+ AAGAGGAAATCTCATTGACTTGCTGGATG
                      ____________________________________________________________
consensus ACCTGGTGCCACTCTTTCCAGGTCCTGGGCGAAGAGGAAATCTCATTGACTTGCTGGATG
 
. : . : . : . : . : . :
JMFS008D05+ CAGGTTGGATAGCTTGTGTGGGAGCAGCTTCAGGTTGCAGAGTAAGTTTCTGCAATTGCT
JMFS124D11+ CAGGTTGGATAGCTTGTGTGGGAGCAGCTTCAGGTTGCAGAGTAAGTTTCTGCAATTGCT
JMFS079B10+ CAGGTTGGATAGCTTGTGTGGGAGCAGCTTCAGGTTGCAGAGTAAGTTTCTGCAATTGCT
JMFS071B06+ CAGGTTGGATAGCTTGTGTGGGAGCAGCTTCAGGTTGCAGAGTAAGTTTCTGCAATTGCT
JMSF032H24+ CAGGTTGGATAGCTTGTGTGGGAGCAGCTTCAGGTTGCAGAGTAAGTTTCTGCAATTGCT
JMFS088F10+ T
JMFS081C06+ GT
JMFS108E01+ GT
JMFS079E08+ GT
JMFS104G11+ CTGCAATAGCT
JMFS110B02+ GT
                      ____________________________________________________________
consensus CAGGTTGGATAGCTTGTGTGGGAGCAGCTTCAGGTTGCAGAGTAAGTTTCTGCAATTGCT
 
. : . : . : . : . : . :
JMFS008D05+ GAGTCATTTGTGCTTGCTCAGGTTGTCTAGATGAAGAACCAGCATCCACAGGAGATTCCA
JMFS124D11+ GAGTCATTTGTGCTTGCTCAGGTTGTCTAGATGAAGAACCAGCATCCACAGGAGATTCCA
JMFS079B10+ GAGTCATTTGTGCTTGCTCAGGTTGTCTAGATGAAGAACCAGCATCCACAGGAGATTCCA
JMFS071B06+ GAGTCATTTGTGCTTGCTCAGGTTGTCTAGATGAAGAACCAGCATCCACAGGAGATTCCA
JMSF032H24+ GAGTCATTTGTGCTTGCTCAGGTTGTCTAGATGAAGAACCAGCATCCACAGGAGATTCCA
JMFS102B11+ GTCTAGATGAAGAACCAGCATCCACAGAGAGTCGCA
JMFF051B23+ AGATGAAGAACCAGCATCCACAGGAGATTCCA
JMFS088F10+ CAGTCATTTGTGCATGCTCAGAGTGTCTAGATCAAGAACCAGCTCTCACACGAGATTGCA
JMFS081C06+ CAGTCATTTGTGCATGCTCAGAGTGTCTAGATGAAGAACCAGCATCCACAGGAGATTGCA
JMFS108E01+ CAGTCATCTGTGCATGGTCAGAGTGTCTAGATGAAGAACCAGCATCCACAGAGAGTCGCA
JMFS079E08+ CAGTCATTTGTGCATGCTAAGAGCGTCTAGATGAAGAACCAGCACTCACAGCAGATTGCA
JMFS104G11+ GAGTCATCTGTGCTTGCTCAGAGTGTCTAGATGAAGAACCAGCATCCACAGGAGATCGCA
JMFS110B02+ CAGTCATCTGTGCATGCTCAGAGTGTCCAAATCAAGAACCAGCTCTCACAGAGAGTTGCG
                      ____________________________________________________________
consensus GAGTCATTTGTGCTTGCTCAGAGTGTCTAGATGAAGAACCAGCATCCACAGGAGATTGCA
 
. : . : . : . : . : . :
JMFS124D11+ CTGGCCTAGGATAAGACATGGGCTGAGTTGCAATGGCTTGATATGGAAGCTG
JMFS079B10+ CTGGCCTAGGATAAGACATGGGCTGAGTTGCAATGGCTTGATATGGAAGCTGGGTTGCTT
JMFS071B06+ CTGGCCTAGGATAAGACATGGGCTGAGTTGCAATGGCTTGATATGGAAGCTGGGTTGCTT
JMSF032H24+ CTGGCCTAGGATAAGACATGGGCTGAGTTGCAATGGCTTGATATGGAAGCTGGGTTGCTT
JMFS102B11+ CTGGCCTAGGATAAGACATGCGCTGAGTTGCAATGGCTTGATATGGAAGCTAGGTAGCTT
JMFF051B23+ CTGGCCTAGGATAAGACATGGGCTGAGTTGCAATGGCTTGATATGGAAGCTGGGTTGCTT
JMFS088F10+ CTGGCCTAGGATAAAACATGCGCTGAGGTGCTATGGCTTTATATAGAAGCTAGGTAGCTT
JMFS081C06+ CTGGCCTAGGATAAGACATGCGCTGAGTTGCTATGGCTTGATATAGAAGCCAGGTAGCTT
JMFS146E11+ TGAGTTGCAATGGCTTTATATAGAAGCCAGTGAGCTT
JMFS108E01+ CTGGCCTAGTATAAGACATGGGCTGAGGTGCTATGGCTTGATATAGCAGCCAGTGAGCTT
JMFS079E08+ CTGGCCTAGAATAAAACATGGGCTGAGGTGCAATGGCTTGATATAGAAGCCAGGATGCTT
JMFS104G11+ CTGGCCTAGGATAAGACATGCGCTGAGTTGCAATGGCTTGATATGGAAGCCAGGTTGCTT
JMFS110B02+ CTGTCCTAGGATAAAACATTCGCTGAGGTGCTATGGCTTGATATAGCAGCCAGTGAGCTT
                      ____________________________________________________________
consensus CTGGCCTAGGATAAGACATGGGCTGAGTTGCAATGGCTTGATATGGAAGCTAGGTTGCTT
 
. : . : . : . : . : . :
JMFS079B10+ GGTGCAGCTCG
JMFS071B06+ GGTGCAGCTCGG-GAACCAGTGGCCTGGAAGGCCCACCACCAGAAGGTGCCCCACGCC-C
JMSF032H24+ GGTGCAGCTCGG-GAACCAGTGGCCTGGAAGGCCCACCACCAGAAGGTGCCCCACGCC-C
JMFS095G09+ AAGGCCCACCACCAGAAGGTGCCCCACGCC-C
JMFS102B11+ GGTGCAGCTCGG-GAAACAGTGGCCTGTAAGGCCCACCACCAGAAGGTGCCCCACGCC-C
JMFF051B23+ GGTGCAGCTCGG-GAACCAGTGGCCTGGAAGGCCCACCACCAGAAGGTGCCCCACGCC-C
JMFS088F10+ GGTGCAGCTCAATGAAACAGTGGCCTGCTAGGCCCGCCACCAAAAGGTGCCCCACGACGC
JMFS081C06+ GGTGCAGCTCAG-GATACAGTGGCCTGCAAGGCCCGCCACCAGAAGGTGCCCCACGCC-C
JMFS146E11+ GGTGCAGATCAA-TATCCATTGGCCTGCTAGGCCCGCCACCAAAAGGTGCCCCACGCC-C
JMFS108E01+ GGTGCAGCTCAG-TATCCATTGGCCTGCTAGGCCCGCCCCCAAAAGGTGCCCCACGAC-C
JMFS079E08+ GGTGCAGCTCGT-GAAACAGTGGCCTGTAAGGACCCCCACCAGAAGGTGCCCCACGCC-C
JMFS156C04+ CCGCCACCAGAAGGTGCCCCATGAC-C
JMFS104G11+ GGTGCAGCTCGG-GAACCAGTGGCCTGCAAGGCCCGCCACCAGAAGGTGCCCCACGCC-C
JMFS110B02+ GGTGCAGCTCAA-TGTCCATTGGCCTGCTAGGCCCGCCACCAGGAGGTGCCCCTCGAG-C
                      ____________________________________________________________
consensus GGTGCAGCTCGG-GAACCAGTGGCCTGCAAGGCCCGCCACCAGAAGGTGCCCCACGCC-C
 
. : . : . : . : . : . :
JMFS071B06+ ACCTATGCCACCA-CGGCGCTGCAATGGAGCTCCCCCACGCTGATATTGC-TGAGCAC-C
JMSF032H24+ ACCTATGCCACCA-CGGCGCTGCAATGGAGCTCCCCCACGCTGATATTGC-TGAGCAC-C
JMFS095G09+ ACGTATGCCAC---GGGGGGTGCAATGGAGCTCCCCCACGATTATATTGC-TGAGCAC-C
JMFS102B11+ ACCTATGCCACCA-CGGCGCTGCAATGGAGCTCCCCCACGCTGATATTGC-TGAGCAC-C
JMFF051B23+ ACCTATGCCACCA-CGGCGCTGCAATGGAGCTCCCCCACGCTGATATTGC-TGAGCAC-C
JMFS088F10+ ACCTATGCCGCCATCGGGGGTGCAATGGAGCTCCCCCACGCTGATACT-CATGAGCAC-C
JMFS081C06+ ACCTATGCCACCA-CGGGGGTGCAATGGAGCTCCCCCACGCTGATATTGC-TGAGCAC-C
JMFS146E11+ ACCTATGCCACCA-CGGCGGTGCAATGGAGATCCCCCACGCTGATATTGC-TGAGCAC-C
JMFS108E01+ ACCTATGCCGCCA-CGGGGGTGCAATGGAGCTCCCCCACCCTGATATTGC-TGAGCAC-C
JMFS079E08+ ACCTAGGCCGCCT-CGGCGCTGCAATGGAGCTCCCCCACGATGATATTGCATGAGCACAC
JMFS156C04+ ACCTATGCCACCA-AGGGTGTGCAATGGTGCTCCCACACGATGATATTGC-TGAGCAC-A
JMFS104G11+ ACCTATGCCACCA-CGGCGCTGCAATGGAGCTCCCCCACGCTGATATTGC-TGAGCAC-C
JMFS110B02+ ACCTA-GCCGCCA-CGGGGGTGCAATGGAGATCCCCCACCCTGATATTGC-TGAGCAC-C
                      ____________________________________________________________
consensus ACCTATGCCACCA-CGGCGGTGCAATGGAGCTCCCCCACGCTGATATTGC-TGAGCAC-C
 
. : . : . : . : . : . :
JMFS071B06+ CCTACCTTGCTGATACTCAGGGTGTCCATAGGACTGCTGA
JMSF032H24+ CCTACCTTGCTGATACTCAGGGTGTCCATAGGACTGCTGAGGAGCCATTCCCCCTCGTGG
JMFS095G09+ CCTACCTTGATGATACTCACGGTGTCCATAGTACTCCTCAGTAACCATTCCCCCTGGTGG
JMFS102B11+ CCTACCTTGCTGATACTCAGGGTGTCCATAGGACTGCTGAGGAGCCATTCCCCCTCGTGG
JMFF051B23+ CCTACCTTGCTGATACTCAGGGTGTCCATAGGACTGCTGAGGAGCCATTCCCCCTCGTGG
JMFS088F10+ CCTACCTTGATGATACTCAGGGGGTCCATAGGACTCCTCAGTAGCCATTCCCCCTGGTGG
JMFS081C06+ CCTACCCTGATGATACTCAGGGGGGCCATAGGACTCCTCAGGAGCCATTCCCCCTGGTGG
JMFS146E11+ CCTACCTTGATGATACTCAGGGTGTCCATAGGACTCCTCAGTAGCCATTCCCCCTCGTGG
JMFS108E01+ CCTACCTCGATGATACTCAGGGTGTCCATAGGACTCCTCAGTAGCCATTCCCCCTCGTGG
JMFS079E08+ CCTACCCTGATGATACTCAGGGTGTCCATAGGACTCCTCAGTAGCCATTCCCCCTGGTGG
JMFS156C04+ CCTACGTTCATGATATCCAGAGTGTCCATAGAAATCCTCAGGAGCCATTCCCCCTGGTGG
JMFS104G11+ GCTACCTTGCTGATACTCAGGGTGTCCATAGGACTGCTGAGGAGCCATTCCCCCTCGTGG
JMFS110B02+ CCTACCCTCATGATACTCAGGGGGGCCCTAGTACTCCTCAGTAGCCATTCCCCCTGGTGG
                      ____________________________________________________________
consensus CCTACCTTGATGATACTCAGGGTGTCCATAGGACTCCTCAGTAGCCATTCCCCCTGGTGG
 
. : . : . : . : . : . :
JMSF032H24+ AGCTCCACCACCTTGGCCACCATGTC-NTCCACGCTGAGGTGCCCAGCCACCTCTTCCTC
JMFS148B06+ CACGATGAGGTGCCCAGCCACCTGTTCTTC
JMFS156B02- TGTC-CTCCACGCTGAGGTGCCCAGCCACCTCTTCCTC
JMFS095G09+ AGCTCCACCACGTTGGCCACCATGTC-ATCCACAGTGAGGTGCCCAGCCACCTCTTCCTC
JMFS102B11+ AGCTCCACCACCTTGGCCACCATGTC-CTCCACGGTGAGGTGCCCAGCCACCTCTTCCTC
JMFF051B23+ AGCTCCACCACCTTGGCCACCATGTC-CTCCACGCTGAGGTGCCCAGCCACCTCTTCCTC
JMFS088F10+ AGCTCCACCACGTTGGCCGCCATGTC-ATCCACAGTGAGGTGCCCAGCCACCTCTTCTTC
JMFS081C06+ AGCTCCACCACGTTGGCCGCCATGTC-ATCCACGGTGAGGTGCCCAGCCACCTCTTCCTC
JMFS146E11+ AGCTCCACCACGTTGGCCACCATGTCTATCCACAGTGAGGTGCCCAGCCACCTCTTCCTC
JMFS108E01+ AGCTCCACCACGTTGGCCACCATGTC-ATCCACAGTGAGGTGCCCAGCCACCTCTTCTTC
JMFS079E08+ AGCTCCACCACGTTGGCCACCATGTC-ATCCACAGTGAGGTGCCCAGCCACCTCTTCCTC
JMFS156C04+ AGCTCCACCACCTTGGCCACCATGTC-CTCCACATTGAGTCGCCCAGCCACCTCTTCCTC
JMFS104G11+ AGCTCCACCACGTTGGCCACCATGTC-CTCCACGGTGAGGTGCCCAGCCACCTCTTCCTC
JMFS110B02+ AGCTCCACCACGTTGGCCACCATGTC-ATCCACGGTGAGGCGCCCAGCCACCTCTTCCTC
                      ____________________________________________________________
consensus AGCTCCACCACGTTGGCCACCATGTC-ATCCACGGTGAGGTGCCCAGCCACCTCTTCCTC
 
. : . : . : . : . : . :
JMSF032H24+ CTTGGTAGCTACCCTCCTGTTGATGTTGCTGTGGTGGGCGTTGAGCACCACCTCGTCCTG
JMFS148B06+ GGTGGGAGGTACCTTCCTGTTGATGTGTCTGTGGTGGGCGTTGAGCACCACCTCGTCGTG
JMFS156B02- CTTGGTAGCTACCCTCCTGTTGATGTTGCTGTGGTGGGCGTTGAGCACCACCTCGTCCTG
JMFS095G09+ CGTGGTAGGCACCCTCCCGCTGATGATCCTGTGGTGGGAGTTTAGCTCCACCTCGTCCGG
JMFS102B11+ CGTGGTAGCTACCCTCCTGTTGATGTTGCTGTGGTGGGCGTTGAGCACCACCTCGTCCTG
JMFF051B23+ CTTGGTAGCTACCCTCCTGTTGATGTTGCTGTGGTGGGCGTTGAGCACCACCTCGTCCTG
JMFS088F10+ GGTGGTAGGCACCC
JMFS081C06+ GGTGGTAGGTACCCTCCTGTTGATGTTTCTGTGGTGGGGGTTGAGCAGCTCCTGGTCCTG
JMFS146E11+ CGTGGTAGGGACCCTCCTGTTAATGCTGCTGTGGTGGGCGTTGAGCACCACCTCGTCTTG
JMFS108E01+ GGTGGTAGGTTCCTTCCTGTTTATGTTTCTGTGGTGGGCGTTGAGCAGCTCCTGGTCTTG
JMFS079E08+ CGTGGTAGGTCCCCTCCTGTCCATGATGCTGAGGTGGGCGATAAGCACCACCTCGTCATG
JMFS156C04+ GGTGGAAGGGACCCTCCTGTTGATGCTGCTGTGGTGGGCGTTGAGCACCACCTCGTCTTG
JMFS104G11+ CGTGGTAGCGACCCTCCTGTTCATGTTCCTGTGGTGGGCGATGAGCACCACCTCGTCCGG
JMFS110B02+ GGTGGTAGGGACCTTCCTGTTCAGGTTCTTGTGGTGGGCGAGAGGCACCACCTCGTCCGG
                      ____________________________________________________________
consensus CGTGGTAGGTACCCTCCTGTTGATGTTGCTGTGGTGGGCGTTGAGCACCACCTCGTCCTG
 
. : . : . : . : . : . :
JMSF032H24+ CTCCAGTCTCCTGAGGATCAGATGACTCACCCCC
JMFS148B06+ CTCCAGTGTCCTGAGGATCACATGACTCACCCCCA--CCAGGATGT
JMFS156B02- CTCCAGTCTCCTGAGGATCAGATGACTCACCCCCA--CCAGGATGTTCAGTTCTTCTCTT
JMFS095G09+ TTCCAGTCTCCTAAGGATCAAATGACTCACCCCCA--CCAGCATGTTCAGTTCATCTCTT
JMFS102B11+ TTCCAGTCTCCTGAGGATCAAATGACTCACCCCCA--CCAGGATGTTCAGTTCTTCTCTT
JMFF051B23+ CTCCAGTCTCCTGAGGATCAGATGACTCACCCCC
JMFS081C06+ CTCCAGTTTCCTGAGGATCAGATGACTCACCCCC--TGCAGAATGTTCAGGTTTTCTCTT
JMFS146E11+ CTCCAGTGTCCTCAGGATCAGATTACTCACCCCCA--CCAGGATGT
JMFS108E01+ CTCCAGTTTTCTGAGGATCAGATGACTCACCCCC--TGCAGAATGTTCAGTTTTTCTCTT
JMFS079E08+ CTCCAGTCTCATGAGAATCAGATGACTCACC
JMFS156C04+ CTCCAGTGTCCTCAGGATCAGATTACTCACCCCCA--CCAGGATGTTC
JMFS104G11+ CTCCAGTCTCTTGAGGATCAGATGACTCACCCCC--GCGAGGATGTTCAGTTCTTCTCTT
JMFS110B02+ CTCCCGTCTCTTTAGGTTCACATGCCTCACCCCCAGTCGAGTATGTTCAGTTCTTGTTTT
                      ____________________________________________________________
consensus CTCCAGTCTCCTGAGGATCAGATGACTCACCCCCA--CCAGGATGTTCAGTTCTTCTCTT
 
. : . : . : . : . : . :
JMFS156B02- TCTCACCATGGTACCTTAAGAGCCGCCGCTCTCTACAAACACTTCGTTG-GTGGGTGGAG
JMFS095G09+ TCTCCCCATGGAACCTTAAGAACCGCCGCTCTGTACAAACA
JMFS102B11+ TCTCACCATGGTACCTTAAGAGCCGCCGCTCTCTACAAACACTTCGTTG-GTGGGTGGAG
JMFS081C06+ TCTCACCATGGTACATTAAGAGCCTCCGCTCTC
JMFS108E01+ TCTCACCATGGTACATTAAGAGCCTCCGCT
JMFS104G11+ TCTCGCCATGGTGCCTTAAGAGCCGCCGCTCTCTACAAACACTTCGTTG-GTGGGTGGAG
JMFS110B02+ TCTCGCCATGGGGCCATAAAAACCACCGCTCTCCACCATCGTTTGGTTGAGTGGGTGTAA
                      ____________________________________________________________
consensus TCTCACCATGGTACCTTAAGAGCCGCCGCTCTCTACAAACACTTCGTTG-GTGGGTGGAG
 
. : . : . : . : . : . :
JMFS156B02- AGAGAGAGAGAGGGAGGACGAGAGCGAGAAGTGCGC
JMFS102B11+ AGACAGAGAGAGGGAGGACGAGAGCGACAAGTGCGCTTTTTTA
JMFS104G11+ ACAGAGAGAGAGGGAGGCCGAGAGCGATAAGTGCGCTTTTTTA
JMFS110B02+ ACATAGAGAGAGGGAGGCCGAGAGCGATGAGTGCGCTTGTCCAGACACAGCAACTTAGAC
                      ____________________________________________________________
consensus AGAGAGAGAGAGGGAGGACGAGAGCGATAAGTGCGCTTTTTTAGACACAGCAACTTAGAC
 
. : . : . : . : . : . :
JMFS110B02+ AGGAGGGCCCTCGCCCCGAAGTCCTACAGGCCTGGGCACCCCAGAGTGTGGAGCGGCGGC
                      ____________________________________________________________
consensus AGGAGGGCCCTCGCCCCGAAGTCCTACAGGCCTGGGCACCCCAGAGTGTGGAGCGGCGGC