Contig 011821:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS044G11+                                          TCTTTCAACTCTCGCGACAATATCAACAT
JMFS133H01+                                                  CTCTCGCGACAATATCAACAT
JMFS135B03+                                                                TCAACAT
                      ____________________________________________________________
consensus                                            TCTTTCAACTCTCGCGACAATATCAACAT
 
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JMFS044G11+           CATCATCATCAAACACAAGAAGAAATAGCTTAGCCGTGGTGGTATGCTCAAGTACCTGAC
JMFS133H01+           CATCATCATCAAACACAAGAAGAAATAGCTTAGCCGTGGTGGTATGCTCAAGTACCTGAC
JMFS135B03+           CATCATCATCAACACNAAGAAGANATAGCTTAGCCGTGGTGGTATGCTCAAGTACCTGAC
                      ____________________________________________________________
consensus             CATCATCATCAAACACAAGAAGAAATAGCTTAGCCGTGGTGGTATGCTCAAGTACCTGAC
 
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JMFS044G11+           AAGGTAATACTACTGCAAAAGAGAGGAATTGGTAACAAACAAAATTTCTATAGAGATCCG
JMFS133H01+           AAGGTAATACTACTGCAAAAGAGAGGAATTGGTAACAAACAAAATTTCTATAGAGATCCG
JMFS135B03+           AAGGTAATACTACTGCAAAAGAGAGGAATTGGTAACAAACAAAATTTCTATAGAGATCCG
                      ____________________________________________________________
consensus             AAGGTAATACTACTGCAAAAGAGAGGAATTGGTAACAAACAAAATTTCTATAGAGATCCG
 
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JMFS044G11+           CCTCTTTTCCAAAGACCACCTATAATCAATTCCAAAGAAAAGAAAAAAAACATAGCAGTA
JMFS133H01+           CCTCTTTTCCAAAGACCACCTATAATCAATTCCAAAGAAAAGAAAAAAAACATAGCAGTA
JMFS135B03+           CCTCTTTTCCAAAGACCACCTATAATCAATTCCAAAGAAAAGAAAAAAAACATAGCAGTA
JMFS108D02+                              CTATAATCAATTCCAAAGAAAAGAAAAAAAACATAGCAGTA
                      ____________________________________________________________
consensus             CCTCTTTTCCAAAGACCACCTATAATCAATTCCAAAGAAAAGAAAAAAAACATAGCAGTA
 
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JMFS044G11+           TAGATTTGGGAGAAATTAAGCAAAGAGAAACACTAAAACCGTGGTAGTATCCTAATGAGC
JMFS133H01+           TAGATTTGGGAGAAATTAAGCAAAGAGAAACACTAAAACTGTGGTAGTATCCTAATGAGC
JMFS135B03+           TAGATTTGGGAGAAATTAAGCAAAGAGAAACACTAAAACCGTGGTAGTATCCTAATGAGC
JMFS108D02+           TAGATTTGGGAGAAATTAAGCAAAGAGAAACACTAAAACCGTGGTAGTATCCTAATGAGC
                      ____________________________________________________________
consensus             TAGATTTGGGAGAAATTAAGCAAAGAGAAACACTAAAACCGTGGTAGTATCCTAATGAGC
 
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JMFS044G11+           AGATTTTAATTTTTGAAAGTAAAAATCACCAACGGACAGGGAAAAAGGAGAGAGACGCAT
JMFS133H01+           AGATTTTAATTTTTGAAAGTAAAAATCACCAACGGACAGGGAAAAAGGAGAGAGACGCAT
JMFS135B03+           AGATTTTAATTTTTGAAAGTAAAAATCACCAACGGACAGGGAAAAAGGAGAGAGACGCAT
JMFS108D02+           AGATTTTAATTTTTGAAAGTAAAAATCACCAACGGACAGGGAAAAAGGAGAGAGACGCAT
                      ____________________________________________________________
consensus             AGATTTTAATTTTTGAAAGTAAAAATCACCAACGGACAGGGAAAAAGGAGAGAGACGCAT
 
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JMFS044G11+           CTCTGAATCCGAAACAAGTAGTAAAAGAAGAAAATTCCTTATCCAGAATCCTCACCAAAA
JMFS133H01+           CTCTGAATCCGAAACAAGTAGTAAAAGAAGAAAATTCCTTATCCAGAATCCTCACCAAAA
JMFS135B03+           CTCTGAATCCGAAACAAGTAGTAAAAGAAGAAAATTCCTTATCCAGAATCCTCACCAAAA
JMFS108D02+           CTCTGAATCCGAAACAAGTAGTAAAAGAAGAAAATTCCTTATCCAGAATCCTCACCAAAA
                      ____________________________________________________________
consensus             CTCTGAATCCGAAACAAGTAGTAAAAGAAGAAAATTCCTTATCCAGAATCCTCACCAAAA
 
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JMFS044G11+           CGAACCGCGTGATGCCTAAACCTTGGGAGATAGCCATGTTGAAGCAGCAGGAAGAGGTTG
JMFS133H01+           CGAACCGCGTGATGCCTAAACCTTGGGAGATAGCCATGTTGAAGCAGCAGGAAGAGGTTG
JMFS135B03+           CGAACCGCGTGATGCCTAAACCTTGGGAGATAGCCATGTTGAAGCAGCAGGAAGAGGTTG
JMFS108D02+           CGAACCGCGTGATGCCTAAACCTTGGGAGATAGCCATGTTGAAGCAGCAGGAAGAGGTTG
                      ____________________________________________________________
consensus             CGAACCGCGTGATGCCTAAACCTTGGGAGATAGCCATGTTGAAGCAGCAGGAAGAGGTTG
 
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JMFS044G11+           TAGAGGCTCCGGACATGCAGTGACAGAATCATCCGGCACTCGTCGGAGAAGTCATAGTTT
JMFS133H01+           TAGAGGCTCCGGACATGCAGTGACAGAATCATCCGGCACTCGTCGGAGAAGTCATAGTTT
JMFS135B03+           TAGAGGCTCCGGACATGCAGTGACAGAATCATCCGGCACTCGTCGGAGAAGTCATAGTTT
JMFS108D02+           TAGAGGCTCCGGACATGCAGTGACAGAATCATCCGGCACTCGTCGGAGAAGTCATAGTTT
                      ____________________________________________________________
consensus             TAGAGGCTCCGGACATGCAGTGACAGAATCATCCGGCACTCGTCGGAGAAGTCATAGTTT
 
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JMFS044G11+           CCGGCAATGGCGGATCGGAATCTCAGAAATGAATGGGGGGAAAGTATAAATACGGGAACT
JMFS133H01+           CCGGCAATGGCGGATCGGAATCTCAGAAATGAATGGGGGGAAAGTATAAATACGGGAACT
JMFS135B03+           CCGGCAATGGCGGATCGGAATCTCAGAAATGAATGGGGGGAAAGTATAAATACGGGAACT
JMFS108D02+           CCGGCAATGGCGGATCGGAATCTCAGAAATGAATGGGGGGAAAGTATAAATACGGGAACT
                      ____________________________________________________________
consensus             CCGGCAATGGCGGATCGGAATCTCAGAAATGAATGGGGGGAAAGTATAAATACGGGAACT
 
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JMFS044G11+           GGAAGTTGAATAAAGGAAAAAGGATGAAATTCACAGAAGG                    
JMFS133H01+           GGAAGTTGAATAAAGGAAAAAGGATGAAATTCACAGAAGGGAAGATCACTGGCAGGCAGA
JMFS135B03+           GGAAGTTGAATAAAGGAAAAAGGATGAAATTCACAGAAGGGAAGATCACTGGCAGGCAGA
JMFS108D02+           GGAAGTTGAATAAAGGAAAAAGGATGAAATTCACAGAAGGGAAGATCACTGGCAGGCAGA
                      ____________________________________________________________
consensus             GGAAGTTGAATAAAGGAAAAAGGATGAAATTCACAGAAGGGAAGATCACTGGCAGGCAGA
 
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JMFS133H01+           GAAAA                                                       
JMFS135B03+           GAAAACAGCAGAGTGAAGAAAGCGGAGAGGAGAGGAGAAGAGAAGAGAAGAGAAGAGAGA
JMFS108D02+           GAAAACAGCAGAGTGAAGAAAGCGGAGAGGAGAGGAGAAGAGAAGAGAAGAGAAGAGAGA
                      ____________________________________________________________
consensus             GAAAACAGCAGAGTGAAGAAAGCGGAGAGGAGAGGAGAAGAGAAGAGAAGAGAAGAGAGA
 
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JMFS135B03+           GAGCTGC                                                     
JMFS108D02+           GAGCTGCTATTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXGGGTGCGATGAGTAATTTGA
                      ____________________________________________________________
consensus             GAGCTGCTATTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTGCGATGAGTAATTTGA