Contig 011816:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS021A04Sequence621011816 (2)ref|XP_002268673.1|2e-44PREDICTED: protein argonaute 7-like [Vitis vinifera]
JMFS099D10Sequence617011816 (2)emb|CBI38237.3|1e-26unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFS021A04+                                                      AGCTCAATCCTATCGTT
                      ____________________________________________________________
consensus                                                        AGCTCAATCCTATCGTT
 
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JMFS021A04+           CTCGAATTCGGCTGGGCTGTATATAGTCCTCCTACCATCATAAACCGGCTGAACACCAGA
                      ____________________________________________________________
consensus             CTCGAATTCGGCTGGGCTGTATATAGTCCTCCTACCATCATAAACCGGCTGAACACCAGA
 
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JMFS021A04+           AACCGCTGCAGAGTGGACCTGCACTATCTCTCGTTTGATCATTCTCGCAACTTCCTTGGA
JMFS099D10+                                                      CTCGCAACTTCCTTGGA
                      ____________________________________________________________
consensus             AACCGCTGCAGAGTGGACCTGCACTATCTCTCGTTTGATCATTCTCGCAACTTCCTTGGA
 
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JMFS021A04+           TGGATTCGGGGAAATCTCGACATCGTAATGGAAGATTTTCTGCAAGGGATTGAACTTAAC
JMFS099D10+           TGGATTCGGGGAAATCTCGACATCGTAATGGAAGATTTTCTGCAAGGGATTGAACTTAAC
                      ____________________________________________________________
consensus             TGGATTCGGGGAAATCTCGACATCGTAATGGAAGATTTTCTGCAAGGGATTGAACTTAAC
 
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JMFS021A04+           AAGAAAATGATTGGCAAAAAGCGAGATAGTTTGCCCTTCCACTCCACCTGAATCTGGTCT
JMFS099D10+           AAGAAAATGATTGGCAAAAAGCGAGATAGTTTGCCCTTCCACTCCACCTGAATCTGGTCT
                      ____________________________________________________________
consensus             AAGAAAATGATTGGCAAAAAGCGAGATAGTTTGCCCTTCCACTCCACCTGAATCTGGTCT
 
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JMFS021A04+           TCTTGCCCTAACCCTCCTAACATCTTTCTTCACAGTTTCTCCTGCAGCAGCAGAAGATGA
JMFS099D10+           TCTTGCCCTAACCCTCCTAACATCTTTCTTCACAGTTTCTCCTGCAGCAGCAGAAGATGA
                      ____________________________________________________________
consensus             TCTTGCCCTAACCCTCCTAACATCTTTCTTCACAGTTTCTCCTGCAGCAGCAGAAGATGA
 
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JMFS021A04+           GATATCTTGAGGCTCGGAAGCAGAAGATGAGGTGGCAAGAGGGGGAGAGTTCCACTCCAA
JMFS099D10+           GATATCTTGAGGCTCGGAAGCAGAAGATGAGGTGGCAAGAGGGGGAGAGTTCCACTCCAA
                      ____________________________________________________________
consensus             GATATCTTGAGGCTCGGAAGCAGAAGATGAGGTGGCAAGAGGGGGAGAGTTCCACTCCAA
 
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JMFS021A04+           TGGAGGTTTCTTGAAATGGGGTTTTGGCCTAAAGCTCTGATTTTGAAGGGCAGGGAGAGA
JMFS099D10+           TGGAGGTTTCTTGAAATGGGGTTTTGGCCTAAAGCTCTGATTTTGAAGGGCAGGGAGAGA
                      ____________________________________________________________
consensus             TGGAGGTTTCTTGAAATGGGGTTTTGGCCTAAAGCTCTGATTTTGAAGGGCAGGGAGAGA
 
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JMFS021A04+           GGGGGTGGGGGGGAGAGGGAGGAGGGGTGGGTAAGACTGGTAATGGTAAGCTGTATTTGA
JMFS099D10+           GGGGGTGGGGGGGAGAGGGAGGAGGGGTGGGTAAGACTGGTAATGGTAAGCTGTATTTGA
                      ____________________________________________________________
consensus             GGGGGTGGGGGGGAGAGGGAGGAGGGGTGGGTAAGACTGGTAATGGTAAGCTGTATTTGA
 
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JMFS021A04+           GGATTGAAGGTTCACAACACTCCTCCCTCTGAAGCTCTCAGCAGGCTTGGAAGTGCATTT
JMFS099D10+           GGATTGAAGGTTCACAACACTCCTCCCTCTGAAGCTCTCAGCAGGCTTGGAAGTGCATTT
                      ____________________________________________________________
consensus             GGATTGAAGGTTCACAACACTCCTCCCTCTGAAGCTCTCAGCAGGCTTGGAAGTGCATTT
 
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JMFS021A04+           TGTGTTTGTGGTGTGGGCTTCTGTTTCTTCCATGGCTGCCTTTAATTTAACAGAAACCAA
JMFS099D10+           TGTGTTTGTGGTGTGGGCTTCTGTTTCTTCCATGGCTGCCTTTAATTTAACAGAAACCAA
                      ____________________________________________________________
consensus             TGTGTTTGTGGTGTGGGCTTCTGTTTCTTCCATGGCTGCCTTTAATTTAACAGAAACCAA
 
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JMFS021A04+           GAGA                                                        
JMFS099D10+           GAGAATGAGCAGAAAGGGTTGTTTGCATGAGAGAGAGAAGCAGAGGCAGAGAGATATATG
                      ____________________________________________________________
consensus             GAGAATGAGCAGAAAGGGTTGTTTGCATGAGAGAGAGAAGCAGAGGCAGAGAGATATATG
 
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JMFS099D10+           TTCTGCTTCTGATATCACTGGGAGGATGCAGTGCAGAAGTTATTGCAGGTGGTGAGCGGT
                      ____________________________________________________________
consensus             TTCTGCTTCTGATATCACTGGGAGGATGCAGTGCAGAAGTTATTGCAGGTGGTGAGCGGT