Contig 011788:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS067A04Sequence623011788 (2)ref|XP_006347667.1|5e-34PREDICTED: sphingoid long-chain bases kinase 1-like [Solanum tuberosum]
JMSF047B06Sequence654011788 (2)ref|XP_009593622.1|2e-37PREDICTED: sphingoid long-chain bases kinase 1 [Nicotiana tomentosiformis]714016202ref|XP_009778181.1|2e-77PREDICTED: sphingoid long-chain bases kinase 1 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF047B06+ AGGATTCCTTATCATCATTTTTACTAGCCTTTTTCTTGTCCAATGCCAATTTCCCAGTA
JMFS067A04+ TGTCCAATGCCAATTTCCCAGTA
                      ____________________________________________________________
consensus AGGATTCCTTATCATCATTTTTACTAGCCTTTTTCTTGTCCAATGCCAATTTCCCAGTA
 
. : . : . : . : . : . :
JMSF047B06+ AAAACTTCATATCCTAGAAGGTCAGACTGCTCGTCTCCAATATCAATCTTGTGCTCCTCC
JMFS067A04+ AAAACTTCATATCCTAGAAGGTCAGACTGCTCGTCTCCAATATCAATCTTGTGCTCCTCC
                      ____________________________________________________________
consensus AAAACTTCATATCCTAGAAGGTCAGACTGCTCGTCTCCAATATCAATCTTGTGCTCCTCC
 
. : . : . : . : . : . :
JMSF047B06+ CTTTTATCCTTCTTAGGATCATTGAAATCGCTAGCACCTCCAACGTCTCTGTCCGGCCGA
JMFS067A04+ CTTTTATCCTTCTTAGGATCATTGAAATCGCTAGCACCTCCAACGTCTCTGTCCGGCCGA
                      ____________________________________________________________
consensus CTTTTATCCTTCTTAGGATCATTGAAATCGCTAGCACCTCCAACGTCTCTGTCCGGCCGA
 
. : . : . : . : . : . :
JMSF047B06+ GCCAAGTTCCTCCCTTTGTTACGCTTCTCCGGGAAGACGATCGGAGACGAATGCTGTCCA
JMFS067A04+ GCCAAGTTCCTCCCTTTGTTACGCTTCTCCGGGAAGACGATCGGAGACGAATGCTGTCCA
                      ____________________________________________________________
consensus GCCAAGTTCCTCCCTTTGTTACGCTTCTCCGGGAAGACGATCGGAGACGAATGCTGTCCA
 
. : . : . : . : . : . :
JMSF047B06+ GTCGTTATCTGAGAGCAAAAACCAAGGCGACGAAGGGACTGCGGAGACGCTGCGAGCCTC
JMFS067A04+ GTCGTTATCTGAGAGCAAAAACCAAGGCGACGAAGGGACTGCGGAGACGCTGCGAGCCTC
                      ____________________________________________________________
consensus GTCGTTATCTGAGAGCAAAAACCAAGGCGACGAAGGGACTGCGGAGACGCTGCGAGCCTC
 
. : . : . : . : . : . :
JMSF047B06+ AAAGAATTGTTCCTGGGAAGATTCCCACTCTTCTGCATATTAAATCCTAGCAGAACGCAG
JMFS067A04+ AAAGAATTGTTCCTGGGAAGATTCCCACTCTTCTGCATATTAAATCCTAGCAGAACGCAG
                      ____________________________________________________________
consensus AAAGAATTGTTCCTGGGAAGATTCCCACTCTTCTGCATATTAAATCCTAGCAGAACGCAG
 
. : . : . : . : . : . :
JMSF047B06+ AGTGAAAATTTCCCGAGAGCCTGACAACCAGCAGCTAACACTGTAGAAAATTATCCTGTA
JMFS067A04+ AGTGAAAATTTCCCGAGAGCCTGACAACCAGCAGCTAACACTGTAGAAAATTATCCTGTA
                      ____________________________________________________________
consensus AGTGAAAATTTCCCGAGAGCCTGACAACCAGCAGCTAACACTGTAGAAAATTATCCTGTA
 
. : . : . : . : . : . :
JMSF047B06+ GATTAAGGGTTTTACGCCAAAAAAACAATCAGTGGAAGTAATTGTCTGAGAGATGGTCCG
JMFS067A04+ GATTAAGGGTTTTACGCCAAAAAAACAATCAGTGGAAGTAATTGTCTGAGAGATGGTCCG
                      ____________________________________________________________
consensus GATTAAGGGTTTTACGCCAAAAAAACAATCAGTGGAAGTAATTGTCTGAGAGATGGTCCG
 
. : . : . : . : . : . :
JMSF047B06+ GTGGCGATCGGCGATGGGAAAATGACGATTCCGGCGATAATTTCATCGGAGAAGAAGCGT
JMFS067A04+ GTGGCGATCGGCGATGGGAAAATGACGATTCCGGCGATAATTTCATCGGAGAAGAAGCGT
                      ____________________________________________________________
consensus GTGGCGATCGGCGATGGGAAAATGACGATTCCGGCGATAATTTCATCGGAGAAGAAGCGT
 
. : . : . : . : . : . :
JMSF047B06+ CAGTGGTTTATGGAAACAGTTCCGGGCGGAAAAGCCGACCACTTTTGGTCTCAGTGTTTG
JMFS067A04+ CAGTGGTTTATGGAAACAGTTCCGGGCGGAAAAGCCGACCACTTTTGGTCTCAGTGTTTG
                      ____________________________________________________________
consensus CAGTGGTTTATGGAAACAGTTCCGGGCGGAAAAGCCGACCACTTTTGGTCTCAGTGTTTG
 
. : . : . : . : . : . :
JMSF047B06+ GTAGAGCAGAAGGAAAGAGAATGGCAGACGAAAATATTTTCCTCTCAGCTTTA
JMFS067A04+ GTAGAGCAGAAGGAAAGAGAATGGCAGACGAAAATATTTTCCTCTCAGCTTTACGCCTTC
                      ____________________________________________________________
consensus GTAGAGCAGAAGGAAAGAGAATGGCAGACGAAAATATTTTCCTCTCAGCTTTACGCCTTC