| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS004A03 | Sequence | 582 | 011786 (9) | ref|XP_009766501.1| | 3e-06 | PREDICTED: F-box protein At2g16365-like [Nicotiana sylvestris] ref|XP_009766502. | |||||
| JMFS058F07 | Sequence | 627 | 011786 (9) | ref|XP_009766501.1| | 1e-05 | PREDICTED: F-box protein At2g16365-like [Nicotiana sylvestris] ref|XP_009766502. | |||||
| JMFS065G11 | Sequence | 617 | 011786 (9) | ref|XP_009766501.1| | 9e-06 | PREDICTED: F-box protein At2g16365-like [Nicotiana sylvestris] ref|XP_009766502. | |||||
| JMFS071C03 | Sequence | 624 | 011786 (9) | ref|XP_009766501.1| | 1e-05 | PREDICTED: F-box protein At2g16365-like [Nicotiana sylvestris] ref|XP_009766502. | |||||
| JMFS085C09 | Sequence | 609 | 011786 (9) | ref|XP_009766501.1| | 1e-05 | PREDICTED: F-box protein At2g16365-like [Nicotiana sylvestris] ref|XP_009766502. | |||||
| JMFS085D09 | Sequence | 594 | 011786 (9) | ||||||||
| JMFS165H05 | Sequence | 590 | 011786 (9) | ref|XP_009766501.1| | 9e-06 | PREDICTED: F-box protein At2g16365-like [Nicotiana sylvestris] ref|XP_009766502. | |||||
| JMSF036D07 | Sequence | 631 | 011786 (9) | ref|XP_009766501.1| | 2e-05 | PREDICTED: F-box protein At2g16365-like [Nicotiana sylvestris] ref|XP_009766502. | 704 | 002927 (5) | ref|XP_009621410.1| | 5e-07 | PREDICTED: F-box protein At2g16365 [Nicotiana tomentosiformis] ref|XP_009621411. |
| JMSF036E23 | Sequence | 636 | 011786 (9) | ref|XP_009766501.1| | 2e-05 | PREDICTED: F-box protein At2g16365-like [Nicotiana sylvestris] ref|XP_009766502. | 690 | 002927 (5) | ref|XP_008236916.1| | 2e-04 | PREDICTED: probable GPI-anchored adhesin-like protein PGA55 isoform X2 [Prunus |
This contig is upended
. : . : . : . : . : . :
JMFS071C03+ GCATCATGATGAGGCTTTAATGTAAGAAACCCACGAGTTT
JMFS058F07+ GCATCATGATGAGGCTTTAATGTAAGAAACCCACGAGTTT
____________________________________________________________
consensus GCATCATGATGAGGCTTTAATGTAAGAAACCCACGAGTTT
. : . : . : . : . : . :
JMFS071C03+ CTTGACCATCTTTTGAAGATAAAGCATTTCTAGAGTGGGTGGACATAGCAGGGGAGTGAT
JMFS058F07+ CTTGACCATCTTTTGAAGATAAAGCATTTCTAGAGTGGGTGGACATAGCAGGGGAGTGAT
JMSF036E23+ CATCTTTTGAAGATAAAGCATTTCTAGAGTGGGTGGACATAGCAGGGGAGTGAT
JMSF036D07+ CATCTTTTGAAGATAAAGCATTTCTAGAGTGGGTGGACATAGCAGGGGAGTGAT
JMFS085D09+ GGGAGTGAT
JMFS085C09+ AGCAGGGGAGTGAT
JMFS165H05+ AGCAGGGGAGTGAT
JMFS065G11+ GACATAGCAGGGGAGTGAT
____________________________________________________________
consensus CTTGACCATCTTTTGAAGATAAAGCATTTCTAGAGTGGGTGGACATAGCAGGGGAGTGAT
. : . : . : . : . : . :
JMFS071C03+ GAGCTGAGCTTTCAATTCTTATGTTCCCTGAACTTGTTCTCAAACTCTCAGTACTATTAG
JMFS058F07+ GAGCTGAGCTTTCAATTCTTATGTTCCCTGAACTTGTTCTCAAACTCTCAGTACTATTAG
JMSF036E23+ GAGCTGAGCTTTCAATTCTTATGTTCCCTGAACTTGTTCTCAAACTCTCAGTACTATTAG
JMSF036D07+ GAGCTGAGCTTTCAATTCTTATGTTCCCTGAACTTGTTCTCAAACTCTCAGTACTATTAG
JMFS004A03+ GTTCTCAAACTCTCAGTACTATTAG
JMFS085D09+ GAGCTGAGCTATCAATTCCTATGTTCCCTGAACTTGTTCTCAGACTCTCAGTATTATTAG
JMFS085C09+ GAGCTGAGCTTTCAATTCTTATGTTCCCTGAACTTGTTCTCAAACTCTCAGTACTATTAG
JMFS165H05+ GAGCTGAGCTTTCAATTCTTATGTTCCCTGAACTTGTTCTCAAACTCTCAGTACTATTAG
JMFS065G11+ GAGCTGAGCTTTCAATTCTTATGTTCCCTGAACTTGTTCTCAAACTCTCAGTACTATTAG
____________________________________________________________
consensus GAGCTGAGCTTTCAATTCTTATGTTCCCTGAACTTGTTCTCAAACTCTCAGTACTATTAG
. : . : . : . : . : . :
JMFS071C03+ ACACATTCCCCACTCCAACCGCATCTTCATTCAGTCTAGTTCCATCATTAATTTTCTTGC
JMFS058F07+ ACACATTCCCCACTCCAACCGCATCTTCATTCAGTCTAGTTCCATCATTAATTTTCTTGC
JMSF036E23+ ACACATTCCCCACTCCAACCGCATCTTCATTCAGTCTAGTTCCATCATTAATTTTCTTGC
JMSF036D07+ ACACATTCCCCACTCCAACCGCATCTTCATTCAGTCTAGTTCCATCATTAATTTTCTTGC
JMFS004A03+ ACACATTCCCCACTCCAACCGCATCTTCATTCAGTCTAGTTCCATCATTAATTTTCTTGC
JMFS085D09+ TCACATTCCCCACTCCAACCGCATCTTCATTCAGTTTAGTTGCATCATTAATTATCTTGC
JMFS085C09+ ACACATTCCCCACTCCAACCGCATCTTCATTCAGTCTAGTTCCATCATTAATTTTCTTGC
JMFS165H05+ ACACATTCCCCACTCCAACCGCATCTTCATTCAGTCTAGTTCCATCATTAATTTTCTTGC
JMFS065G11+ ACACATTCCCCACTCCAACCGCATCTTCATTCAGTCTAGTTCCATCATTAATTTTCTTGC
____________________________________________________________
consensus ACACATTCCCCACTCCAACCGCATCTTCATTCAGTCTAGTTCCATCATTAATTTTCTTGC
. : . : . : . : . : . :
JMFS071C03+ TCTCAAGGGGATTGGGAGAACTAAGGGCTTGTTGTGCT-TTTTCATTTTGACCAGTTCCA
JMFS058F07+ TCTCAAGGGGATTGGGAGAACTAAGGGCTTGTTGTGCT-TTTTCATTTTGACCAGTTCCA
JMSF036E23+ TCTCAAGGGGATTGGGAGAACTAAGGGCTTGTTGTGCT-TTTTCATTTTGACCAGTTCCA
JMSF036D07+ TCTCAAGGGGATTGGGAGAACTAAGGGCTTGTTGTGCT-TTTTCATTTTGACCAGTTCCA
JMFS004A03+ TCTCAAGGGGATTGGGAGAACTAAGGGCTTGTTGTGCT-TTTTCATTTTGACCAGTTCCA
JMFS085D09+ TCTCAAGGGGATTGGGGGAACTAAGGGCTCGCTGTGCTATTTTCAGTCTGACCAGTTCCA
JMFS085C09+ TCTCAAGGGGATTGGGAGAACTAAGGGCTTGTTGTGCT-TTTTCATTTTGACCAGTTCCA
JMFS165H05+ TCTCAAGGGGATTGGGAGAACTAAGGGCTTGTTGTGCT-TTTTCATTTTGACCAGTTCCA
JMFS065G11+ TCTCAAGGGGATTGGGAGAACTAAGGGCTTGTTGTGCT-TTTTCATTTTGACCAGTTCCA
____________________________________________________________
consensus TCTCAAGGGGATTGGGAGAACTAAGGGCTTGTTGTGCT-TTTTCATTTTGACCAGTTCCA
. : . : . : . : . : . :
JMFS071C03+ GTCCATCGTGCTATCCAAACAGATTGAAATGAATACATAGACTGCCCTGTTCTCTCATCA
JMFS058F07+ GTCCATCGTGCTATCCAAACAGATTGAAATGAATACATAGACTGCCCTGTTCTCTCATCA
JMSF036E23+ GTCCATCGTGCTATCCAAACAGATTGAAATGAATACATAGACTGCCCTGTTCTCTCATCA
JMSF036D07+ GTCCATCGTGCTATCCAAACAGATTGAAATGAATACATAGACTGCCCTGTTCTCTCATCA
JMFS004A03+ GTCCATCGTGCTATCCAAACAGATTGAAATGAATACATAGACTGCCCTGTTCTCTCATCA
JMFS085D09+ GTCCATCGTGCTATCCAGTCGGATTGAAATGAATACATAGACTGCCCTGTTCTCTCATCG
JMFS085C09+ GTCCATCGTGCTATCCAAACAGATTGAAATGAATACATAGACTGCCCTGTTCTCTCATCA
JMFS165H05+ GTCCATCGTGCTATCCAAACAGATTGAAATGAATACATAGACTGCCCTGTTCTCTCATCA
JMFS065G11+ GTCCATCGTGCTATCCAAACAGATTGAAATGAATACATAGACTGCCCTGTTCTCTCATCA
____________________________________________________________
consensus GTCCATCGTGCTATCCAAACAGATTGAAATGAATACATAGACTGCCCTGTTCTCTCATCA
. : . : . : . : . : . :
JMFS071C03+ CACTC-TTGGTATGATTGTGCTATGCTCTCCGACATGATGTAATGGAATTTGAGGTTGTT
JMFS058F07+ CACTC-TTGGTATGATTGTGCTATGCTCTCCGACATGATGTAATGGAATTTGAGGTTGTT
JMSF036E23+ CACTC-TTGGTATGATTGTGCTATGCTCTCCGACATGATGTAATGGAATTTGAGGTTGTT
JMSF036D07+ CACTC-TTGGTATGATTGTGCTATGCTCTCCGACATGATGTAATGGAATTTGAGGTTGTT
JMFS004A03+ CACTC-TTGGTATGATTGTGCTATGCTCTCCGACATGATGTAATGGAATTTGAGGTTGTT
JMFS085D09+ CACTCATTGGTATGATTGTGGTATGCTAGCGGGCATGATGTAATGGGATTTGAGGTTGTT
JMFS085C09+ CACTC-TTGGTATGATTGTGCTATGCTCTCCGACATGATGTAATGGAATTTGAGGTTGTT
JMFS165H05+ CACTC-TTGGTATGATTGTGCTATGCTCTCCGACATGATGTAATGGAATTTGAGGTTGTT
JMFS065G11+ CACTC-TTGGTATGATTGTGCTATGCTCTCCGACATGATGTAATGGAATTTGAGGTTGTT
____________________________________________________________
consensus CACTC-TTGGTATGATTGTGCTATGCTCTCCGACATGATGTAATGGAATTTGAGGTTGTT
. : . : . : . : . : . :
JMFS071C03+ TCCCACTTACAACTACTCTTTTCCCTTCAGATGTTCATGAAAACTTCATTCCTTTGACCT
JMFS058F07+ TCCCACTTACAAATACTCTTTTCCCTTCAGATGTTCATGAAAACTTCATTCCTTTGACCT
JMSF036E23+ TCCCACTTACAACTACTCTTTTCCCTTCAGATGTTCATGAAAACTTCATTCCTTTGACCT
JMSF036D07+ TCCCACTTACAACTACTCTTTTCCCTTCAGATGTTCATGAAAACTTCATTCCTTTGACCT
JMFS004A03+ TCCCACTTACAACTACTCTTTTCCCTTCAGATGTTCATGAAAACTTCATTCCTTTGACCT
JMFS085D09+ TCCCACTTGCAACCACTCTTTTCCCTTCAGATGTTCATGAAAACTTCATTCCTTTGACCT
JMFS085C09+ TCCCACTTACAACTACTCTTTTCCCTTCAGATGTTCATGAAAACTTCATTCCTTTGACCT
JMFS165H05+ TCCCACTTACAACTACTCTTTTCCCTTCAGATGTTCATGAAAACTTCATTCCTTTGACCT
JMFS065G11+ TCCCACTTACAACTACTCTTTTCCCTTCAGATGTTCATGAAAACTTCATTCCTTTGACCT
____________________________________________________________
consensus TCCCACTTACAACTACTCTTTTCCCTTCAGATGTTCATGAAAACTTCATTCCTTTGACCT
. : . : . : . : . : . :
JMFS071C03+ CTGATCCTCAATGAAAAGTTGATGGGAACGAGAAAGACGAAAAAGAAGCAAGAGGCGAGG
JMFS058F07+ CTGATCCTCAATGAAAAGTTGATGGGAACGAGAAAGACGAAAAAGAAGCAAGAGGCGAGG
JMSF036E23+ CTGATCCTCAATGAAAAGTTGATGGGAACGAGAAAGACGAAAAAGAAGCAAGAGGCGAGG
JMSF036D07+ CTGATCCTCAATGAAAAGTTGATGGGAACGAGAAAGACGAAAAAGAAGCAAGAGGCGAGG
JMFS004A03+ CTGATCCTCAATGAAAAGTTGATGGGAACGAGAAAGACGAAAAAGAAGCAAGAGGCGAGG
JMFS085D09+ CTGATCCTCAATGAAAAGTTGATGGGAACGAGAAAGACGAAAAAGAAGCAACAGGCGAGG
JMFS085C09+ CTGATCCTCAATGAAAAGTTGATGGGAACGAGAAAGACGAAAAAGAAGCAAGAGGCGAGG
JMFS165H05+ CTGATCCTCAATGAAAAGTTGATGGGAACGAGAAAGACGAAAAAGAAGCAAGAGGCGAGG
JMFS065G11+ CTGATCCTCAATGAAAAGTTGATGGGAACGAGAAAGACGAAAAAGAAGCAAGAGGCGAGG
____________________________________________________________
consensus CTGATCCTCAATGAAAAGTTGATGGGAACGAGAAAGACGAAAAAGAAGCAAGAGGCGAGG
. : . : . : . : . : . :
JMFS071C03+ CTGAGCGAGCCGGTAGAAGCCCACATCTAAGGCCTAGGGTTCATCTCCGCCGCGCCGTAC
JMFS058F07+ CTGAGCGAGCCGGTAGAAGCCCACATCTAAGGCCTAGGGTTCATCTCCGCCGCGCCGTAC
JMSF036E23+ CTGAGCGAGCCGGTAGAAGCCCACATCTAAGGCCTAGGGTTCATCTCCGCCGCGCCGTAC
JMSF036D07+ CTGAGCGAGCCGGTAGAAGCCCACATCTAAGGCCTAGGGTTCATCTCCGCCGCGCCGTAC
JMFS004A03+ CTGACCGAGCCGGTAGAAGCCCACATCTAAGGCCCAGGGTTCATCTCCGCCGCGCCGTAC
JMFS085D09+ CTGAGCGAGCCGGTATAAGCCCACATCTAAGGCCTAGGGTTCATTTCCGCCGCGCCGTAC
JMFS085C09+ CTGAGCGAGCCGGTAGAAGCCCACATCTAAGGCCTAGGGTTCATCTCCGCCGCGCCGTAC
JMFS165H05+ CTGAGCGAGCCGGTAGAAGCCCACATCTAAGGCCTAGGGTTCATCTCCGCCGCGCCGTAC
JMFS065G11+ CTGAGCGAGCCGGTAGAAGCCCACATCTAAGGCCTAGGGTTCATCTCCGCCGCGCCGTAC
____________________________________________________________
consensus CTGAGCGAGCCGGTAGAAGCCCACATCTAAGGCCTAGGGTTCATCTCCGCCGCGCCGTAC
. : . : . : . : . : . :
JMFS071C03+ ATGCAGATCGGAATTTTCTGATGGATTCTGCGGCGGTGAGGAGTAA
JMFS058F07+ ATGCAGATCGGAATTTTCTGATGGATTCTGCGGCGGTGAGGAGTAAGGA
JMSF036E23+ ATGCAGATCGGAATTTTCTGATGGATTCTGCGGCGGTGAGGAGTAAGGAGTGGAAGAGAG
JMSF036D07+ ATGCAGATCGGAATTTTCTGATGGATTCTGCGGCGGTGAGGAGTAAGGAGTGGAAGAGAG
JMFS004A03+ ATGCAGATCGGAATTTTCTGATGGATTCTGCGGCGGTGAGGAGTAAGGAGTGGAAGAGAG
JMFS085D09+ ATGCAGATCGGAATTTTCTGATGGATTTTGCGGCGGTGAGGAGTAAGGAGTGTAAGAGAG
JMFS085C09+ ATGCAGATCGGAATTTTCTGATGGATTCTGCGGCGGTGAGGAGTAAGGAGTGGAAGAGAG
JMFS165H05+ ATGCAGATCGGAATTTTCTGATGGATTCTGCGGCGGTGAGGAGTAAGGAGTGGAAGAGAG
JMFS065G11+ ATGCAGATCGGAATTTTCTGATGGATTCTGCGGCGGTGAGGAGTAAGGAGTGGAAGAGAG
____________________________________________________________
consensus ATGCAGATCGGAATTTTCTGATGGATTCTGCGGCGGTGAGGAGTAAGGAGTGGAAGAGAG
. : . : . : . : . : . :
JMSF036E23+ AGAGAGATGGGGGAGGGAAAAAGGTTAGAGACGACCC
JMSF036D07+ AGAGAGATGGGGGAGGGAAAAAGGTTAGAGACGACCC
JMFS004A03+ AGAGAGATGGGGGAGGGAAAAAGGTTAGAGACGACCCAGAAATGAAAATGGGTTGCA
JMFS085D09+ AGAGAGATGGGGGAGGGACAAAGGTTAGAGACGACCCAGAAATGA
JMFS085C09+ AGAGAGATGGGGGAGGGAAAAAGGTTAGAGACGACCCAGAAATGAAAATGGGTTGCA
JMFS165H05+ AGAGAGATGGGGGAGGGAAAAAGGTTAGAGACGACCCA
JMFS065G11+ AGAGAGATGGGGGAGGGAAAAAGGTTAGAGACGACCCAGAAATGAAAATGGGTTGCAGTT
____________________________________________________________
consensus AGAGAGATGGGGGAGGGAAAAAGGTTAGAGACGACCCAGAAATGAAAATGGGTTGCAGTT