| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS047A12 | Sequence | 622 | 011772 (5) | ref|XP_009617761.1| | 6e-68 | PREDICTED: poly [ADP-ribose] polymerase 1 isoform X1 [Nicotiana tomentosiformis | |||||
| JMFS131D04 | Sequence | 621 | 011772 (5) | ref|XP_009781599.1| | 3e-81 | PREDICTED: poly [ADP-ribose] polymerase 1 isoform X3 [Nicotiana sylvestris] | |||||
| JMSF026O05 | Sequence | 688 | 011772 (5) | ref|XP_009781599.1| | 9e-86 | PREDICTED: poly [ADP-ribose] polymerase 1 isoform X3 [Nicotiana sylvestris] | 689 | 010046 (3) | ref|XP_009781599.1| | 4e-96 | PREDICTED: poly [ADP-ribose] polymerase 1 isoform X3 [Nicotiana sylvestris] |
| JMSF037M20 | Sequence | 624 | 011772 (5) | ref|XP_009781597.1| | 2e-78 | PREDICTED: poly [ADP-ribose] polymerase 1 isoform X1 [Nicotiana sylvestris] | 652 | 010046 (3) | ref|XP_009781597.1| | 4e-101 | PREDICTED: poly [ADP-ribose] polymerase 1 isoform X1 [Nicotiana sylvestris] |
| JMSF039E03 | Sequence | 674 | 011772 (5) | ref|XP_009781599.1| | 5e-83 | PREDICTED: poly [ADP-ribose] polymerase 1 isoform X3 [Nicotiana sylvestris] | 824 | 010046 (3) | ref|XP_009781597.1| | 7e-124 | PREDICTED: poly [ADP-ribose] polymerase 1 isoform X1 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF026O05+ GGATT
____________________________________________________________
consensus GGATT
. : . : . : . : . : . :
JMSF039E03+ GGCACCAGCTGTGGATGTTGATTCTNGTAAAGGTTCCTCTTTGGCAACTTT
JMFS131D04+ AAGGTTCCTCTTTGGCAACTTT
JMSF026O05+ TTTCCTCTTGGCACCAGCTGTGGATGTTGATTCTTGTAAAGGTTCCTCTTTGGCAACTTT
____________________________________________________________
consensus TTTCCTCTTGGCACCAGCTGTGGATGTTGATTCTTGTAAAGGTTCCTCTTTGGCAACTTT
. : . : . : . : . : . :
JMSF039E03+ TACAGTAGAATTCTTAACCAGGGAAGAAACAACTGCCTGATCACTGGCTGGAAGGCTATC
JMFS131D04+ TACAGTAGAATTCTTAACCAGGGAAGAAACAACTGCCTGATCACTGGCTGGAAGGCTATC
JMSF026O05+ TACAGTAGAATTCTTAACCAGGGAAGAAACAACTGCCTGATCACTGGCTGGAAGGCTATC
JMSF037M20+ TACAGTAGAATTCTTAACCAGGGAAGAAACAACTGCCTGATCACTGGCTGGAAGGCTATC
____________________________________________________________
consensus TACAGTAGAATTCTTAACCAGGGAAGAAACAACTGCCTGATCACTGGCTGGAAGGCTATC
. : . : . : . : . : . :
JMSF039E03+ CCATCCCAACAATTTATCCACTTGGGTAACTGGGGACTTTTCCATGAAACATTTAGCATG
JMFS131D04+ CCATCCCAACAATTTATCCACTTGGGTAACTGGGGACTTTTCCATGAAACATTTAGCATG
JMSF026O05+ CCATCCCAACAATTTATCCACTTGGGTAACTGGGGACTTTTCCATGAAACATTTAGCATG
JMSF037M20+ CCATCCCAACAATTTATCCACTTGGGTAACTGGGGACTTTTCCATGAAACATTTAGCATG
JMFS047A12+ TTTCCATGAAACATTTAGCATG
____________________________________________________________
consensus CCATCCCAACAATTTATCCACTTGGGTAACTGGGGACTTTTCCATGAAACATTTAGCATG
. : . : . : . : . : . :
JMSF039E03+ GTGCCATGCCAAAGACCTGGCTCCCTGACCTTTAGCCTTCGATGATATGCGGACCTCTCC
JMFS131D04+ GTGCCATGCCAAAGACCTGGCTCCCTGACCTTTAGCCTTCGATGATATGCGGACCTCTCC
JMSF026O05+ GTGCCATGCCAAAGACCTGGCTCCCTGACCTTTAGCCTTCGATGATATGCGGACCTCTCC
JMSF037M20+ GTGCCATGCCAAAGACCTGGCTCCCTGACCTTTAGCCTTCGATGATATGCGGACCTCTCC
JMFS047A12+ GTGCCATGCCAAAGACCTGGCTCCCTGACCTTTAGCCTTCGATGATATGCGGACCTCTCC
____________________________________________________________
consensus GTGCCATGCCAAAGACCTGGCTCCCTGACCTTTAGCCTTCGATGATATGCGGACCTCTCC
. : . : . : . : . : . :
JMSF039E03+ TTTCATAATCTTTTCATTGCAGTGCTTACAGGTGGCACGAGAAGTTTGAGAGGTTTCAAC
JMFS131D04+ TTTCATAATCTTTTCATTGCAGTGCTTACAGGTGGCACGAGAAGTTTGAGAGGTTTCAAC
JMSF026O05+ TTTCATAATCTTTTCATTGCAGTGCTTACAGGTGGCACGAGAAGTTTGAGAGGTTTCAAC
JMSF037M20+ TTTCATAATCTTTTCANNGCAGTGCTTACAGGTGGCACGAGAAGTTTGAGAGGTTTCAAC
JMFS047A12+ TTTCATAATCTTTTCATTGCAGTGCTTACAGGTGGCACGAGAAGTTTGAGAGGTTTCAAC
____________________________________________________________
consensus TTTCATAATCTTTTCATTGCAGTGCTTACAGGTGGCACGAGAAGTTTGAGAGGTTTCAAC
. : . : . : . : . : . :
JMSF039E03+ ACCATATTCCATAACAGCAGGGGTAGGGGCATCTGAGGATCCACATCCACCTCCCTCCAC
JMFS131D04+ ACCATATTCCATAACAGCAGGGGTAGGGGCATCTGAGGATCCACATCCACCTCCCTCCAC
JMSF026O05+ ACCATATTCCATAACAGCAGGGGTAGGGGCATCTGAGGATCCACATCCACCTCCCTCCAC
JMSF037M20+ ACCATATTCCATAACAGCAGGGGTAGGGGCATCTGAGGATCCACATCCACCTCCCTCCAC
JMFS047A12+ ACCATATTCCATAACAGCAGGGGTAGGGGCATCTGAGGATCCACATCCACCTCCCTCCAC
____________________________________________________________
consensus ACCATATTCCATAACAGCAGGGGTAGGGGCATCTGAGGATCCACATCCACCTCCCTCCAC
. : . : . : . : . : . :
JMSF039E03+ ATATTTCCTAATCTTCTCCTGATCCTCCCAACGGAGTGATTCTAAGCCTTCAACATCATC
JMFS131D04+ ATATTTCCTAATCTTCTCCTGATCCTCCCAACGGAGTGATTCTAAGCCTTCAACATCATC
JMSF026O05+ ATATTTCCTAATCTTCTCCTGATCCTCCCAACGGAGTGATTCTAAGCCTTCAACATCATC
JMSF037M20+ ATATTTCNTAATCTTCTCCTGATCCTCCCAACGGAGTGATTCTAAGCCTTCAACATCATC
JMFS047A12+ ATATTTCCTAATCTTCTCCTGATCCTCCCAACGGAGTGATTCTAAGCCTTCAACATCATC
____________________________________________________________
consensus ATATTTCCTAATCTTCTCCTGATCCTCCCAACGGAGTGATTCTAAGCCTTCAACATCATC
. : . : . : . : . : . :
JMSF039E03+ AGTAGCTTTTATCTGCTTCGCCTTTTTTAAGATACACCCACCATGATTCCACATCGGCAT
JMFS131D04+ AGTAGCTTTTATCTGCTTCGCCTTTTTTAAGATACACCCACCATGATTCCACATCGGCAT
JMSF026O05+ AGTAGCTTTTATCTGCTTCGCCTTTTTTAAGATACACCCACCATGATTCCACATCGGCAT
JMSF037M20+ AGTAGCTTTTATCTGCTTCGCCTTTTTTAAGATACACCCACCATGATTCCACATCGGCAT
JMFS047A12+ AGTAGCTTTTATCTGCTTCGCCTTTTTTAAGATACACCCACCATGATTCCACATCGGCAT
____________________________________________________________
consensus AGTAGCTTTTATCTGCTTCGCCTTTTTTAAGATACACCCACCATGATTCCACATCGGCAT
. : . : . : . : . : . :
JMSF039E03+ GACGCCATCAAATTGGGTGGCTTGGACCATCTTGCCGAGCCTGAGCGTCTCTTTGTCAAT
JMFS131D04+ GACGCCATCAAATTGGGTGGCTTGGACCATCTTGCCGAGCCTGAGCGTCTCTTTGTCAAT
JMSF026O05+ GACGCCATCAAATTGGGTGGCTTGGACCATCTTGCCGAGCCTGAGCGTCTCTTTGTCAAT
JMSF037M20+ GACGCCATCAAATTGGGTGGCTTGGACCATCTTGCCGAGCCTGAGCGTCTCTTTGTCAAT
JMFS047A12+ GACGCCATCAAATTGGGTGGCTTGGACCATCTTGCCGAGCCTGAGCGTCTCTTTGTCAAT
____________________________________________________________
consensus GACGCCATCAAATTGGGTGGCTTGGACCATCTTGCCGAGCCTGAGCGTCTCTTTGTCAAT
. : . : . : . : . : . :
JMSF039E03+ GGGGCTCTTGCAGGTTTTGCATGAGGATCGAGACGACTTGGCGTACTCCGCCTTCCACGG
JMFS131D04+ GGGGCTCTTGCAGGTTTTGCATGAGGATCGAGACGACTTGGCGTACTCCGCCTTCCACGG
JMSF026O05+ GGGGCTCTTGCAGGTTTTGCATGAGGATCGAGACGACTTGGCGTACTCCGCCTTCCACGG
JMSF037M20+ GGGGCTCTTGCAGGTTTTGCATGAGGATCGAGACGACTTGGCGTACTCCGCCTTCCACGG
JMFS047A12+ GGGGCTCTTGCAGGTTTTGCATGAGGATCGAGACGACTTGGCGTACTCCGCCTTCCACGG
____________________________________________________________
consensus GGGGCTCTTGCAGGTTTTGCATGAGGATCGAGACGACTTGGCGTACTCCGCCTTCCACGG
. : . : . : . : . : . :
JMSF039E03+ CTTATGAGGGCTCGCCATTTTTACACCTTCGCCTTTCCTCTCTCTGCTACACTGTTTTCC
JMFS131D04+ CTTATGAGGGCTCGCCATTTTTACACCTTCGCCTTTCCTCTCTCTGCTACACTGTTTTC
JMSF026O05+ CTTATGAGGGCTCGCCATTTTTACACCTTCGCCTTTCCTCTCTCTGCTACACTGTTTTCC
JMSF037M20+ CTTATGAGGGCTCGCCATTTTTACACCTTCGCCTTTCCTCTCTCTGCTACACTGTTTTCC
JMFS047A12+ CTTATGAGGGCTCGCCATTTTTACACCTTCGCCTTTCCTCTCTCTGCTACACTGTTTTCC
____________________________________________________________
consensus CTTATGAGGGCTCGCCATTTTTACACCTTCGCCTTTCCTCTCTCTGCTACACTGTTTTCC
. : . : . : . : . : . :
JMSF039E03+ GGTTACTGCGATTCGTTATTC
JMSF026O05+ GGTTACTGCGATTCGTTATTC
JMSF037M20+ GGTTACTGCGATTCGTTATTC
JMFS047A12+ GGTTACTGCGATTCGTTATTCGGAGCTCTCTCTCGCTTCCTCTCTGCGCATATATATGGT
____________________________________________________________
consensus GGTTACTGCGATTCGTTATTCGGAGCTCTCTCTCGCTTCCTCTCTGCGCATATATATGGT
. : . : . : . : . : . :
JMFS047A12+ CGCGGTGCGGGCGGTGACACTCGTGGGGACTGGGGAGAGTGAAAAGTGATGTGCACAACC
____________________________________________________________
consensus CGCGGTGCGGGCGGTGACACTCGTGGGGACTGGGGAGAGTGAAAAGTGATGTGCACAACC