Contig 011756:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008L12Sequence284011756 (5)ref|XP_004228600.1|9e-30PREDICTED: formate--tetrahydrofolate ligase [Solanum lycopersicum]770002685 (5)ref|XP_006354188.1|5e-98PREDICTED: formate--tetrahydrofolate ligase-like [Solanum tuberosum]
JMFF044H06Sequence668011756 (5)ref|XP_004228600.1|1e-108PREDICTED: formate--tetrahydrofolate ligase [Solanum lycopersicum]458002685 (5)ref|XP_009778643.1|2e-21PREDICTED: formate--tetrahydrofolate ligase-like [Nicotiana sylvestris]
JMFF050P12Sequence599011756 (5)ref|XP_009588889.1|2e-83PREDICTED: formate--tetrahydrofolate ligase [Nicotiana tomentosiformis]
JMFS030C07Sequence482011756 (5)ref|XP_004228600.1|2e-38PREDICTED: formate--tetrahydrofolate ligase [Solanum lycopersicum]
JMSF046L05Sequence624011756 (5)ref|XP_004228600.1|1e-98PREDICTED: formate--tetrahydrofolate ligase [Solanum lycopersicum]843002685 (5)ref|XP_002891578.1|2e-16510-formyltetrahydrofolate synthetase [Arabidopsis lyrata subsp. lyrata] gb|EFH6

Alignment

This contig is upended


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JMFF044H06+                                                                    CAA
                      ____________________________________________________________
consensus                                                                      CAA
 
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JMFF044H06+           TACCAAGTTTTCTCAATCGCCTAACCATTACATCACTGAATTTTCGCTTTCCCTCTTTGT
JMSF046L05+                                                     TTCGCTTTCCCTCTTTGT
                      ____________________________________________________________
consensus             TACCAAGTTTTCTCAATCGCCTAACCATTACATCACTGAATTTTCGCTTTCCCTCTTTGT
 
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JMFF044H06+           TTGGCGGGCATAGCCTGTTAAAAAGTGCTTTGTCAGACTGACTCGACTCATGGAAAACCC
JMSF046L05+           TNGGCGGGCATAGCCTGTTAAAAAGTGCTTTGTCAGACTGACTCGACTCATGGAAAACCC
                      ____________________________________________________________
consensus             TTGGCGGGCATAGCCTGTTAAAAAGTGCTTTGTCAGACTGACTCGACTCATGGAAAACCC
 
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JMFF044H06+           GAGTATCAATGGCAGCCGCTAAAAGGTTATTTGCAGCTGTTATTGCATGGATATCCCCCG
JMSF046L05+           GAGTATCAATGGCAGCCGCTAAAAGGTTATTTGCAGCTGTTATTGCATGGATATCCCCCG
JMFF050P12+                                                        CATGGATATCCCCCG
                      ____________________________________________________________
consensus             GAGTATCAATGGCAGCCGCTAAAAGGTTATTTGCAGCTGTTATTGCATGGATATCCCCCG
 
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JMFF044H06+           TTAAGTGAAGATTGAACTCGTCCATAGGAATCACTTGACTGTAGCCTCCACCTGCAGCGC
JMSF046L05+           TTAAGTGAAGATTGAACTCGTCCATAGGAATCACTTGACTGTAGCCTCCACCTGCAGCGC
JMFF050P12+           TTAAGTGAAGATTGAACTCGTCCATAGGAATCACTTGACTGTAGCCTCCACCTGCAGCGC
                      ____________________________________________________________
consensus             TTAAGTGAAGATTGAACTCGTCCATAGGAATCACTTGACTGTAGCCTCCACCTGCAGCGC
 
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JMFF044H06+           CTCCCTTGATTCCAAAAGTCGGTCCTTGTGATGGTTGGCGGAGACATGTTACAACCTTTT
JMSF046L05+           CTCCCTTGATTCCAAAAGTCGGTCCTTGTGATGGTTGGCGGAGACATGTTACAACCTTTT
JMFF050P12+           CTCCCTTGATTCCAAAAGTCGGTCCTTGTGATGGTTGGCGGAGACATGTTACAACCTTTT
                      ____________________________________________________________
consensus             CTCCCTTGATTCCAAAAGTCGGTCCTTGTGATGGTTGGCGGAGACATGTTACAACCTTTT
 
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JMFF044H06+           TATCAAGAAAAGCACCCAATGCCTGACACAGACCAACAGTAGTAGTGGACTTTCCTTCTC
JMSF046L05+           TATCAAGAAAAGCACCCAATGCCTGACACAGACTAACAGTAGTAGTGGACTTTCCTTCTC
JMFF050P12+           TATCAAGAAAAGCACCCAATGCCTGACACAGACCAACAGTAGTAGTGGACTTTCCTTCTC
JMFS030C07+                                                                     TC
                      ____________________________________________________________
consensus             TATCAAGAAAAGCACCCAATGCCTGACACAGACCAACAGTAGTAGTGGACTTTCCTTCTC
 
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JMFF008L12+                                                   CCCATCCTGAGCTTCTCCAA
JMFF044H06+           CAAGAGGGGTTGGAGTTATCCCTCCAACCACCACATAATACCCATCCTGAGCTTCTCCAA
JMSF046L05+           CAAGAGGGGTTGGAGTTATCCCTCCAACCACCACATAATACCCATCCTGAGCTTCTCCAA
JMFF050P12+           CAAGAGGGGTTGGAGTTATCCCTCCAACCACCACATAATACCCATCCTGAGCTTCTCCAA
JMFS030C07+           CAAGAGGGGTTGGAGTTATCCCTCCAACCACCACATAATACCCATCCTGAGCTTCTCCAA
                      ____________________________________________________________
consensus             CAAGAGGGGTTGGAGTTATCCCTCCAACCACCACATAATACCCATCCTGAGCTTCTCCAA
 
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JMFF008L12+           GCTCATCAAGCGCAGACAAAAGCACCTTGGCTTTGTACTTCCCATAAAGATCGTAGTGTT
JMFF044H06+           GCTCATCAAGCGCAGACAAAAGCACCTTGGCTTTGTACTTCCCATAAAGATCGTAGTGTT
JMSF046L05+           GCTCATCAAGCGCAGACAAAAGCACCTTGGCTTTGTACTTCCCATAAAGATCGTAGTGTT
JMFF050P12+           GCTCATCAAGCGCAGACAAAAGCACCTTGGCTTTGTACTTCCCATAAAGATCGTAGTGTT
JMFS030C07+           GCTCATCAAGCGCAGACAAAAGCACCTTGGCTTTGTACTTCCCATAAAGATCGTAGTGTT
                      ____________________________________________________________
consensus             GCTCATCAAGCGCAGACAAAAGCACCTTGGCTTTGTACTTCCCATAAAGATCGTAGTGTT
 
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JMFF008L12+           TAGCACCCAAACCGAGTTCCTGCGCAATCTCAGATATGTGAAGCGGCTCCACAGAGTTCG
JMFF044H06+           TAGCACCCAAACCGAGTTCCTGCGCAATCTCAGATATGTGAAGCGGCTCCACAGAGTTCG
JMSF046L05+           TAGCACCCAAACCGAGTTCCTGCGCAATCTCAGATATGTGAAGCGGCTCCACAGAGTTCG
JMFF050P12+           TAGCACCCAAACCGAGTTCCTGCGCAATCTCAGATATGTGAAGCGGCTCCACAGAGTTCG
JMFS030C07+           TAGCACCCAAACCGAGTTCCTGCGCAATCTCAGATATGTGAAGCGGCTCCACAGAGTTCG
                      ____________________________________________________________
consensus             TAGCACCCAAACCGAGTTCCTGCGCAATCTCAGATATGTGAAGCGGCTCCACAGAGTTCG
 
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JMFF008L12+           CAATGTCTATATCCGCCGGAACCGGCGAAGCCACTTCCAATTTCCTGGTCGTCTTCCCCA
JMFF044H06+           CAATGTCTATATCCGCCGGAACCGGCGAAGCCACTTCCAATTTCCTGGTCGTCTTCCCCA
JMSF046L05+           CAATGTCTATATCCGCCGGAACCGGCGAAGCCACTTCCAATTTCCTGGTCGTCTTCCCCA
JMFF050P12+           CAATGTCTATATCCGCCGGAACCGGCGAAGCCACTTCCAATTTCCTGGTCGTCTTCCCCA
JMFS030C07+           CAATGTCTATATCCGCCGGAACCGGCGAAGCCACTTCCAATTTCCTGGTCGTCTTCCCCA
                      ____________________________________________________________
consensus             CAATGTCTATATCCGCCGGAACCGGCGAAGCCACTTCCAATTTCCTGGTCGTCTTCCCCA
 
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JMFF008L12+           TACTTCTCCCCTTTCCTGGTATCCCTATCTTTGGAGATTGCGGGATTTGGAGTACTAAAT
JMFF044H06+           TACTTCTCCCCTTTCCTGGTATCCCTATCTTTGGAGATTGCGGGATTTGGAGTACTAAAT
JMSF046L05+           TACTTCTCCCCTTTCCTGGTATCCCTATCTTTGGAGATTGCGGGATTTGGAGTACTAAAT
JMFF050P12+           TACTTCTCCCCTTTCCTGGTATCCCTATCTTTGGAGATTGCGGGATTTGGAGTACTAAAT
JMFS030C07+           TACTTCTCCCCTTTCCTGGTATCCCTATCTTTGGAGATTGCGGGATTTGGAGTACTAAAT
                      ____________________________________________________________
consensus             TACTTCTCCCCTTTCCTGGTATCCCTATCTTTGGAGATTGCGGGATTTGGAGTACTAAAT
 
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JMFF008L12+           TATAT                                                       
JMFF044H06+           TATAT                                                       
JMSF046L05+           TATAT                                                       
JMFF050P12+           TATATGAGGCCAGGCTTATGGACTGTGGGAGAAATATAAAATGTTGAAAAGTAAGCCCAG
JMFS030C07+           TATATGAGGCCAGGCTTATGGACTGTGGGAGAAATATAAAATGTTGAAAAGTAAGCCCAG
                      ____________________________________________________________
consensus             TATATGAGGCCAGGCTTATGGACTGTGGGAGAAATATAAAATGTTGAAAAGTAAGCCCAG
 
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JMFF050P12+           GAATAGTTTATGGATTGTGAC                                       
JMFS030C07+           GAATAGTTTATGGATTGTGACGAGATATGAAAGGTAATCTATGGCGCTGGATACATTAGA
                      ____________________________________________________________
consensus             GAATAGTTTATGGATTGTGACGAGATATGAAAGGTAATCTATGGCGCTGGATACATTAGA
 
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JMFS030C07+           TTTAAAGGTTTTTTAAATTGATAATTGACGAGAGCGACAAATGTTACTCGCAATATTTTA
                      ____________________________________________________________
consensus             TTTAAAGGTTTTTTAAATTGATAATTGACGAGAGCGACAAATGTTACTCGCAATATTTTA