Contig 011754:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS028F06Sequence683011754 (2)ref|XP_009614610.1|1e-69PREDICTED: putative disease resistance protein RGA3 [Nicotiana tomentosiformis]
JMFS105D09Sequence608011754 (2)gb|AAZ07913.1|1e-78NBS-LRR protein [Ipomoea batatas]

Alignment

This contig is upended


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JMFS105D09+                                                 ACTCCTCCTCAGTGTGTTTGTA
                      ____________________________________________________________
consensus                                                   ACTCCTCCTCAGTGTGTTTGTA
 
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JMFS105D09+           ACGTAGCAGGCTTCCCATGACCGTAACCGCAAGGGGTAGTCCTTTGCACTTTTGAGCAAT
                      ____________________________________________________________
consensus             ACGTAGCAGGCTTCCCATGACCGTAACCGCAAGGGGTAGTCCTTTGCACTTTTGAGCAAT
 
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JMFS105D09+           TTTCTGACCAATTTCTTTCAGTTTCTTAGAAACCTCCTCCGTTCTCTCGGAAAATGCTAT
                      ____________________________________________________________
consensus             TTTCTGACCAATTTCTTTCAGTTTCTTAGAAACCTCCTCCGTTCTCTCGGAAAATGCTAT
 
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JMFS105D09+           CCTACTAAGCAACAACCAAGCATCTGAGTCGGATATGAGCTGCACCGGATGCAGATGCAC
                      ____________________________________________________________
consensus             CCTACTAAGCAACAACCAAGCATCTGAGTCGGATATGAGCTGCACCGGATGCAGATGCAC
 
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JMFS105D09+           ACTTCCCATCATTCTTGCAACTCTCTCACTCCTTGAGGTTACCAAGATTATACTACCAGG
                      ____________________________________________________________
consensus             ACTTCCCATCATTCTTGCAACTCTCTCACTCCTTGAGGTTACCAAGATTATACTACCAGG
 
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JMFS105D09+           GACTCCAACCTTGAGGAGACAGTTCTTAAATGGCGCCCACTTTGCATTCTCCTCTGTCCA
JMFS028F06+                          GAGACAGTTGTTAAATGGCTCCCACTTTGCATAATCCTCTGTCCA
                      ____________________________________________________________
consensus             GACTCCAACCTTGAGGAGACAGTTGTTAAATGGCTCCCACTTTGCATTCTCCTCTGTCCA
 
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JMFS105D09+           CACATCATCCAACACAAGTAGGAACCTTTTCTGAGATAAAGTGGTTTGGATTTTTTCCAG
JMFS028F06+           CACATCATCCAACACAAGTAGGAACCTTTTATGAGACAAAGTGGTTTGGATTTTGTCCAG
                      ____________________________________________________________
consensus             CACATCATCCAACACAAGTAGGAACCTTTTCTGAGATAAAGTGGTTTGGATTTTTTCCAG
 
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JMFS105D09+           TAACATTTGCAATTGAAAGAGATCTGTGGAGCTTTTAGTGGTTGACTCAACAATGGCTTT
JMFS028F06+           TAACACTTGCAATTGAGACAGATCTGTGGAGCTTTTAGTGGTTGACTCAACAATGGCTTT
                      ____________________________________________________________
consensus             TAACATTTGCAATTGAGAGAGATCTGTGGAGCTTTTAGTGGTTGACTCAACAATGGCTTT
 
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JMFS105D09+           TGCAATCTTGATCTCGTCAAAAGTGTCTGAAACACAAACCCACACCCTTTCATCAAAATG
JMFS028F06+           CGCAATCTTGATCTCGTCAAAAGGTTGTGAAACACAAACCCACACCCTTTGAGGAAAATG
                      ____________________________________________________________
consensus             TGCAATCTTGATCTCGTCAAAAGTTTGTGAAACACAAACCCACACCCTTTGATGAAAATG
 
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JMFS105D09+           AGCTTTTATCTGTTCATCACCATAGACTAGTTGAGCAAGGGTAGTTTTCCCTATCCCTCC
JMFS028F06+           AGCCTTTATCTGTTGATCGTTATAGACTAGTTGAGCAAGGGTAGTTTTCCCTATCCCTCC
                      ____________________________________________________________
consensus             AGCTTTTATCTGTTGATCGTTATAGACTAGTTGAGCAAGGGTAGTTTTCCCTATCCCTCC
 
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JMFS105D09+           CGCGCCCACTATGGAAAT                                          
JMFS028F06+           CGCGCCCACTATGGAAATGACGAGAGGGCCAGGGGGACCTTGAAGCAACTTGCTTATTAA
                      ____________________________________________________________
consensus             CGCGCCCACTATGGAAATGACGAGAGGGCCAGGGGGACCTTGAAGCAACTTGCTTATTAA
 
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JMFS028F06+           AGCACTGGCATCGGATTCCCGACCTTGAATCACTGATGCATCCACATATGCAGTAGTGGG
                      ____________________________________________________________
consensus             AGCACTGGCATCGGATTCCCGACCTTGAATCACTGATGCATCCACATATGCAGTAGTGGG
 
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JMFS028F06+           CACTGGCTTCCATTCTTGATCACAAGTGTGTGTGCGCGCTATAGATGCTTGATCAAATTT
                      ____________________________________________________________
consensus             CACTGGCTTCCATTCTTGATCACAAGTGTGTGTGCGCGCTATAGATGCTTGATCAAATTT