Contig 011748:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A07+                                                              CAGTCCAAA
                      ____________________________________________________________
consensus                                                                CAGTCCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A07+           CACTTGAAAGTTCCCTGTAGAAGCTCAGGACGAACCTCACTAGTCCGAGTAACCACTCCT
JMFS023H08+                GAAAGTTCCCTGTAGAAGCTCAGGACGAACCTCACTAGTCCGAGTAACCACTCCT
                      ____________________________________________________________
consensus             CACTTGAAAGTTCCCTGTAGAAGCTCAGGACGAACCTCACTAGTCCGAGTAACCACTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A07+           GTCACAGCCACCAGTTTCCCTATCTCAGCTGTAGTCAATTCCCTCAATCTCTTAATTAAG
JMFS023H08+           GTCACAGCCACCAGTTTCCCTATCTCAGCTGTAGTCAATTCCCTCAATCTCTTAATTAAG
                      ____________________________________________________________
consensus             GTCACAGCCACCAGTTTCCCTATCTCAGCTGTAGTCAATTCCCTCAATCTCTTAATTAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A07+           GGAAGATTGTAAAAAGCAACATTGATATCCTTGTTGGGGTTATCATCTGTTATAAAAGTG
JMFS023H08+           GGAAGATTGTAAAAAGCAACATTGATATCCTTGTTGGGGTTATCATCTGTTATAAAAGTG
                      ____________________________________________________________
consensus             GGAAGATTGTAAAAAGCAACATTGATATCCTTGTTGGGGTTATCATCTGTTATAAAAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A07+           GGCTTTTGTTCCATGACGAAACGTTTGCAGGCACTCTTCAAATACGGCTCAAACCTGATA
JMFS023H08+           GGCTTTTGTTCCATGACGAAACGTTTGCAGGCACTCTTCAAATACGGCTCAAACCTGATA
                      ____________________________________________________________
consensus             GGCTTTTGTTCCATGACGAAACGTTTGCAGGCACTCTTCAAATACGGCTCAAACCTGATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A07+           AACTCGTCAGAAATCGCCCTCTGAAGAATGTCATTAAAGCGCATGACATGGGAAAAGTCA
JMFS023H08+           AACTCGTCAGAAATCGCCCTCTGAAGAATGTCATTAAAGCGCATGACATGGGAAAAGTCA
                      ____________________________________________________________
consensus             AACTCGTCAGAAATCGCCCTCTGAAGAATGTCATTAAAGCGCATGACATGGGAAAAGTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A07+           ATGAACATGGTGTTGGACTCGTTGGGCCTCATAGCTTCGATCTCCGATTCGTAGTAAGGC
JMFS023H08+           ATGAACATGGTGTTGGACTCGTTGGGCCTCATAGCTTCGATCTCCGATTCGTAGTAAGGC
                      ____________________________________________________________
consensus             ATGAACATGGTGTTGGACTCGTTGGGCCTCATAGCTTCGATCTCCGATTCGTAGTAAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A07+           TCTCGAGAGTTGGCATCCAACCGGAAACTCTTGAGAAACTCCAAGAAAATGTTCTCGACC
JMFS023H08+           TCTCGAGAGTTGGCATCCAACCGGAAACTCTTGAGAAACTCCAAGAAAATGTTCTCGACC
                      ____________________________________________________________
consensus             TCTCGAGAGTTGGCATCCAACCGGAAACTCTTGAGAAACTCCAAGAAAATGTTCTCGACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A07+           TGGGCTGCTTTCTGGTCCACGAAGTACCCACCGCCGCCATAACTATCCATTCTTAATTCT
JMFS023H08+           TGGGCTGCTTTCTGGTCCACGAAGTACCCACCGCCGCCATAACTATCCATTCTTAATTCT
                      ____________________________________________________________
consensus             TGGGCTGCTTTCTGGTCCACGAAGTACCCACCGCCGCCATAACTATCCATTCTTAATTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS122A07+           CGATAATACAAATATATGTTTTTGCTTAGTTCCACTGGTTCCCTCTTCCTCTCTGTT   
JMFS023H08+           CGATAATACAAATATATGTTTTTGCTTAGTTCCACTGGTTCCCTCTTCCTCTCTGTTTCT
                      ____________________________________________________________
consensus             CGATAATACAAATATATGTTTTTGCTTAGTTCCACTGGTTCCCTCTTCCTCTCTGTTTCT