Contig 011743:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS020C01Sequence615011743 (2)ref|XP_004251765.1|1e-60PREDICTED: two-component response regulator ARR12-like [Solanum lycopersicum]
JMSF037P21Sequence595011743 (2)ref|XP_011078598.1|1e-70PREDICTED: two-component response regulator ARR12-like [Sesamum indicum]639017225ref|XP_009795713.1|5e-28PREDICTED: two-component response regulator ARR12-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF037P21+              TCTGCGTTGAAGGGTCTTCGTTCTCGTGACCATTCTCGTCGCTCTCATCTTCCTCGT
                      ____________________________________________________________
consensus                TCTGCGTTGAAGGGTCTTCGTTCTCGTGACCATTCTCGTCGCTCTCATCTTCCTCGT
 
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JMSF037P21+           CCTTCCTTTTCTTGTTGAGCTTCCCGTTCTGGTCTGTGGAACCCGACAATGGAGCCCCCT
                      ____________________________________________________________
consensus             CCTTCCTTTTCTTGTTGAGCTTCCCGTTCTGGTCTGTGGAACCCGACAATGGAGCCCCCT
 
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JMSF037P21+           GCCCGCCTTCTCCACCCCCGTGAGGAGATCTGTCTTGATCACCCGACTTGTTTTGGCTCT
                      ____________________________________________________________
consensus             GCCCGCCTTCTCCACCCCCGTGAGGAGATCTGTCTTGATCACCCGACTTGTTTTGGCTCT
 
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JMSF037P21+           TGGGCTCGAGCTTCTTTCTTCGGATTACATGCTGCCATATGTTCCTCAGCTCCTCAATCC
                      ____________________________________________________________
consensus             TGGGCTCGAGCTTCTTTCTTCGGATTACATGCTGCCATATGTTCCTCAGCTCCTCAATCC
 
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JMSF037P21+           GCACAGGTTTCACGAGATAGTCACAAGCGCCATGAGTTATTCCCTTCATAACAAGTTTGG
                      ____________________________________________________________
consensus             GCACAGGTTTCACGAGATAGTCACAAGCGCCATGAGTTATTCCCTTCATAACAAGTTTGG
 
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JMSF037P21+           GATCACTATTCGCCGACAACATGATGACAGGAAGATCCATCTCGAGACCAACGAGCTCGA
JMFS020C01+            ATCACTATTCGCCGACAACATGATGACAGGAAGATCCATCTCGAGACCAACGAGCTCGA
                      ____________________________________________________________
consensus             GATCACTATTCGCCGACAACATGATGACAGGAAGATCCATCTCGAGACCAACGAGCTCGA
 
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JMSF037P21+           GCAGCTTAAAACCATCCATATCGGGCATATGAACATCGCTGATCACCAGGTCGAATCTGT
JMFS020C01+           GCAGCTTAAAACCATCCATATCGGGCATATGAACATCGCTGATCACCAGGTCGAATCTGT
                      ____________________________________________________________
consensus             GCAGCTTAAAACCATCCATATCGGGCATATGAACATCGCTGATCACCAGGTCGAATCTGT
 
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JMSF037P21+           CTCTGTTATCTCTCAACATCTTCAGTGCCATTCTTGCCTGACTTGATATAGTTAC     
JMFS020C01+           CTCTGTTATCTCTCAACATCTTCAGTGCCATTCTTGCCTGACTTGATATAGTTACATGAT
                      ____________________________________________________________
consensus             CTCTGTTATCTCTCAACATCTTCAGTGCCATTCTTGCCTGACTTGATATAGTTACATGAT
 
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JMFS020C01+           ACTGGCATTTCCTAAGCAGGCCTTCCAATAACTTCAAGCAAATTGGGTCATCATCAACAG
                      ____________________________________________________________
consensus             ACTGGCATTTCCTAAGCAGGCCTTCCAATAACTTCAAGCAAATTGGGTCATCATCAACAG
 
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JMFS020C01+           CAAGAACTCTCATGCCCACTGGGAAGTTGTCATGATTTCCCTTTTCACTCCCCATGTGTC
                      ____________________________________________________________
consensus             CAAGAACTCTCATGCCCACTGGGAAGTTGTCATGATTTCCCTTTTCACTCCCCATGTGTC
 
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JMFS020C01+           CTCTTATTTCTTCCACAGTCATCTTTTCCCACCCAAAATTTGTTCTTGAGAAAAGCCCAG
                      ____________________________________________________________
consensus             CTCTTATTTCTTCCACAGTCATCTTTTCCCACCCAAAATTTGTTCTTGAGAAAAGCCCAG
 
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JMFS020C01+           ACCAGATCAGAGAATCACTTGCCCAAAGTTCCAATCTTTAGCACAAAAAGGTCAACTTTT
                      ____________________________________________________________
consensus             ACCAGATCAGAGAATCACTTGCCCAAAGTTCCAATCTTTAGCACAAAAAGGTCAACTTTT
 
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JMFS020C01+           TTTGGACTATAAACATGTACCCAGAAAGCCTAAAAATGTGAATGAATTCCAGAATTGAGA
                      ____________________________________________________________
consensus             TTTGGACTATAAACATGTACCCAGAAAGCCTAAAAATGTGAATGAATTCCAGAATTGAGA
 
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JMFS020C01+           GAAAAGCAGGAGTGAAAGACCAATTAGAAGAAGAGACACAGAAAGTGGAGTCTGTGTTAG
                      ____________________________________________________________
consensus             GAAAAGCAGGAGTGAAAGACCAATTAGAAGAAGAGACACAGAAAGTGGAGTCTGTGTTAG
 
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JMFS020C01+           AGAGAGAGAAAGAGAGAGAGTTGTAGTTAGTATAAAGCTGTACGTGTGGACAATGATGGA
                      ____________________________________________________________
consensus             AGAGAGAGAAAGAGAGAGAGTTGTAGTTAGTATAAAGCTGTACGTGTGGACAATGATGGA