Contig 011727:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN041G06Sequence631011727 (2)ref|XP_009792156.1|4e-117PREDICTED: probable protein phosphatase 2C 42 isoform X5 [Nicotiana sylvestris]
JMFS155H10Sequence599011727 (2)ref|XP_009792156.1|1e-111PREDICTED: probable protein phosphatase 2C 42 isoform X5 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS155H10+ TGATCAGCCG
                      ____________________________________________________________
consensus TGATCAGCCG
 
. : . : . : . : . : . :
JMFS155H10+ TTNTGCGCTTCCAGAGTGTGGATGGCTTTTCACAATATCCACGGCCATTTCATTGCTCAA
                      ____________________________________________________________
consensus TTNTGCGCTTCCAGAGTGTGGATGGCTTTTCACAATATCCACGGCCATTTCATTGCTCAA
 
. : . : . : . : . : . :
JMFS155H10+ GTGCTCCCATAAACCATCAGAAGCGAATATGAGGAAAGAATCGTTAGGGTGTAGAGGATG
                      ____________________________________________________________
consensus GTGCTCCCATAAACCATCAGAAGCGAATATGAGGAAAGAATCGTTAGGGTGTAGAGGATG
 
. : . : . : . : . : . :
JMFS155H10+ AGTTAAAATGGATGGGGTTGCAGACAAGATTGGCATGTCTATAGGTTCTTGAAGTCTGAA
                      ____________________________________________________________
consensus AGTTAAAATGGATGGGGTTGCAGACAAGATTGGCATGTCTATAGGTTCTTGAAGTCTGAA
 
. : . : . : . : . : . :
JMFS155H10+ TTTTGCATTTATTGGCTCCCTGTTAAATTGCTGATGTTTCAAGTAAACATCACCAATGGA
JMFN041G06+ GCTGATGTTTCAAGTAAACATCACCAATGGA
                      ____________________________________________________________
consensus TTTTGCATTTATTGGCTCCCTGTTAAATTGCTGATGTTTCAAGTAAACATCACCAATGGA
 
. : . : . : . : . : . :
JMFS155H10+ TCTTGAGATCTGAATTATGCCTTTCACTCTCCAAACCCCATGTTTGAGAACAACGATTTG
JMFN041G06+ TCCTGAGATCTGAATTATGCCTTTCACTCTCCAAACCCCATGTGTGAGAACAACGATTTG
                      ____________________________________________________________
consensus TCTTGAGATCTGAATTATGCCTTTCACTCTCCAAACCCCATGTTTGAGAACAACGATTTG
 
. : . : . : . : . : . :
JMFS155H10+ GGGATCATTTGGATGTAATGCTTTGAGCTCCTGTCTAACAGCGGCAAGGTTAGCATTATG
JMFN041G06+ GGGATCATTTGGATGTAATGCTTTGAGCTCCTGTCTAACAGCGGCAAGGTTAGCATTATG
                      ____________________________________________________________
consensus GGGATCATTTGGATGTAATGCTTTGAGCTCCTGTCTAACAGCGGCAAGGTTAGCATTATG
 
. : . : . : . : . : . :
JMFS155H10+ CTCCTCTGACAACGGTATAGCAGCGATTTCCCCGGTACTACCTACCTTCTTCCCCAGCAC
JMFN041G06+ CTCCTCTGACAACGGTATAGCAGCGATTTCCCCGGTACTACCTACCTTCTTCCCCAGCAC
                      ____________________________________________________________
consensus CTCCTCTGACAACGGTATAGCAGCGATTTCCCCGGTACTACCTACCTTCTTCCCCAGCAC
 
. : . : . : . : . : . :
JMFS155H10+ AACCCGAGAATCTCCGAGACTGGCGATGAAGAGAGTCTGCTGTGATATTACCCCAACTAG
JMFN041G06+ AACCCGAGAATCTCCGAGACTGGCGATGAAGAGAGTCTGCTGTGATATTACCCCAACTAG
                      ____________________________________________________________
consensus AACCCGAGAATCTCCGAGACTGGCGATGAAGAGAGTCTGCTGTGATATTACCCCAACTAG
 
. : . : . : . : . : . :
JMFS155H10+ GCAGCAGGTACCAACTGTTGCCAGATGAGGTTGAGAATTCCACTTGTCTGAAACAAGGTC
JMFN041G06+ GCAGCAGGTACCAACTGTTGCCAGATGAGGTTGAGAATTCCACTTGTCTGAAACAAGGTC
                      ____________________________________________________________
consensus GCAGCAGGTACCAACTGTTGCCAGATGAGGTTGAGAATTCCACTTGTCTGAAACAAGGTC
 
. : . : . : . : . : . :
JMFS155H10+ AGTGAATCCCCTCTCAGTCTCCGAGAAAGCTCTTTGGATCATATCAGCA
JMFN041G06+ AGTGAATCCCCTCTCAGTCTCCGAGAAAGCTCTTTGGATCATATCAGCAGTCACAACGCC
                      ____________________________________________________________
consensus AGTGAATCCCCTCTCAGTCTCCGAGAAAGCTCTTTGGATCATATCAGCAGTCACAACGCC
 
. : . : . : . : . : . :
JMFN041G06+ GTTCTCTTCAGTTGCTGATATTGCTTGGAGATGTCGAAACAAATTATCGCAGACGTAGCG
                      ____________________________________________________________
consensus GTTCTCTTCAGTTGCTGATATTGCTTGGAGATGTCGAAACAAATTATCGCAGACGTAGCG
 
. : . : . : . : . : . :
JMFN041G06+ AGCAGCATCAGGGCCACCATGGCCATCATAGACTCCAACGAAGGTCCCGAACCGACCCGA
                      ____________________________________________________________
consensus AGCAGCATCAGGGCCACCATGGCCATCATAGACTCCAACGAAGGTCCCGAACCGACCCGA
 
. : . : . : . : . : . :
JMFN041G06+ CTCAATCCGGCTCTGATCCTCCAGCACCCGATTCGCCTGCACGACGGCCATCGAGAACTC
                      ____________________________________________________________
consensus CTCAATCCGGCTCTGATCCTCCAGCACCCGATTCGCCTGCACGACGGCCATCGAGAACTC
 
. : . : . : . : . : . :
JMFN041G06+ CCCGCCCCCGTATCTCCCAACATCGTGATACCACAGCAGCCCGTCCCTCCCAAACGCGCC
                      ____________________________________________________________
consensus CCCGCCCCCGTATCTCCCAACATCGTGATACCACAGCAGCCCGTCCCTCCCAAACGCGCC