Contig 011679:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009C05Sequence574011679 (2)gb|KJB82271.1|4e-06hypothetical protein B456_013G186200 [Gossypium raimondii]
JMFN009J23Sequence563011679 (2)gb|KJB82271.1|8e-05hypothetical protein B456_013G186200 [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN009C05+ CTTTAAACAAGATATTGTATTTGAACTTTGTACATGAAAAT
JMFN009J23+ ATTTGAACTTTGTACATGAAAAT
                      ____________________________________________________________
consensus CTTTAAACAAGATATTGTATTTGAACTTTGTACATGAAAAT
 
. : . : . : . : . : . :
JMFN009C05+ AATAAAACAATGAAACAATAATGTTGTGTAATTCTATACAAATGAAAATGAAAATTTCTA
JMFN009J23+ AATAAAACAATGAAACAATAATGTTGTGTAATTCTATACAAATGAAAATGAAAATTTCTA
                      ____________________________________________________________
consensus AATAAAACAATGAAACAATAATGTTGTGTAATTCTATACAAATGAAAATGAAAATTTCTA
 
. : . : . : . : . : . :
JMFN009C05+ GAGATCGAGGGAATCTGATCTGCAGCATGTAACTAAAGAATTGAAGCTAATGATTTTGAG
JMFN009J23+ GAGATCGAGGGAATCTGATCTGCAGCATGTAACTAAAGAATTGAAGCTAATGATTTTGAG
                      ____________________________________________________________
consensus GAGATCGAGGGAATCTGATCTGCAGCATGTAACTAAAGAATTGAAGCTAATGATTTTGAG
 
. : . : . : . : . : . :
JMFN009C05+ AAGTATGGGCAAGCATCATATTTTGATCGGTAATTTTGGGTTTTTGGTGGCGGCCAACGC
JMFN009J23+ AAGTATGGGCAAGCATCATATTTTGATCGGTAATTTTGGGTTTTTGGTGGCGGCCAACGC
                      ____________________________________________________________
consensus AAGTATGGGCAAGCATCATATTTTGATCGGTAATTTTGGGTTTTTGGTGGCGGCCAACGC
 
. : . : . : . : . : . :
JMFN009C05+ CGGCCGCTCTGGCTTCCGACCCTCCAGGGTGCAACGGCCGCGCCTAGCTCCGGGAATGCG
JMFN009J23+ CGGCCGCTCTGGCTTCCGACCCTCCAGGGTGCAACGGACGCGCCTAGCTCCGGGAATGCG
                      ____________________________________________________________
consensus CGGCCGCTCTGGCTTCCGACCCTCCAGGGTGCAACGGCCGCGCCTAGCTCCGGGAATGCG
 
. : . : . : . : . : . :
JMFN009C05+ CGTGCAGGGATTAGCACCGGACGACGGCAAACGGCCCCTCGGAAGGGATTGAACCAGCAT
JMFN009J23+ CGTGCAGGGATTAGCACCGGACGACGGCAAACGGCCCCTCGGAAGGGATTGAACCAGCAT
                      ____________________________________________________________
consensus CGTGCAGGGATTAGCACCGGACGACGGCAAACGGCCCCTCGGAAGGGATTGAACCAGCAT
 
. : . : . : . : . : . :
JMFN009C05+ ATTATGATGCTTCTTCATCCATACATCTTCTCTTTTTAATACCCTCATCGCGCAGGCGCC
JMFN009J23+ ATTATGATGCTTCTTCATCCATACATCTTCTCTTTTTAATACCCTCATCGCGCAGGCGCC
                      ____________________________________________________________
consensus ATTATGATGCTTCTTCATCCATACATCTTCTCTTTTTAATACCCTCATCGCGCAGGCGCC
 
. : . : . : . : . : . :
JMFN009C05+ CTGCAGATTATTACCGCAATTCATCACAACAAATACGGCCAACAACAACCACACCGCCGC
JMFN009J23+ CTGCAGATTATTACCGCAATTCATCACAACAAATACGGCCAACAACAACCACACCGCCGC
                      ____________________________________________________________
consensus CTGCAGATTATTACCGCAATTCATCACAACAAATACGGCCAACAACAACCACACCGCCGC
 
. : . : . : . : . : . :
JMFN009C05+ CGCCGTAGATCTGCCAGCCACCATTTTTTTGTTCAGAACTCCGGTAGATATTTCAACAAC
JMFN009J23+ CGCCGTAGATCTGCCAGCCACCATTTTTTTGTTCAGAACTCCGGTAGATATTTCAACAAC
                      ____________________________________________________________
consensus CGCCGTAGATCTGCCAGCCACCATTTTTTTGTTCAGAACTCCGGTAGATATTTCAACAAC
 
. : . : . : . : . : . :
JMFN009C05+ AAATGAAATGAATTAAGGAGATATTGTTTCTTGTGAGTCTTTCTGGGTGTTTT
JMFN009J23+ AAATGAAATGAATTAAGGAGATATTGTTTCTTGTGAGTCTTTCTGGGTGTTTTAATTTCT
                      ____________________________________________________________
consensus AAATGAAATGAATTAAGGAGATATTGTTTCTTGTGAGTCTTTCTGGGTGTTTTAATTTCT