Contig 011673:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN006M24Sequence540011673 (3)ref|XP_008227272.1|63.9PREDICTED: uncharacterized protein LOC103326806 [Prunus mume]
JMFN008K09Sequence536011673 (3)ref|XP_008227272.1|63.9PREDICTED: uncharacterized protein LOC103326806 [Prunus mume]
JMFN019O12Sequence532011673 (3)ref|XP_008227272.1|63.9PREDICTED: uncharacterized protein LOC103326806 [Prunus mume]

Alignment

This contig is upended


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JMFN019O12+            ACTCCAATTTCATGTTATATTATAAAAATTGCATACAATACAGCTCGATGTGATTTCTA
JMFN008K09+           AACTCCAATTTCATGTTATATTATAAAAACTGCATACAATACAGCTCGATGTGATCTCTA
JMFN006M24+            ACTCCAATTTCATGTTATATTATAAAAACTGCATACAATACAGCTCGATGTGATCTCTA
                      ____________________________________________________________
consensus             AACTCCAATTTCATGTTATATTATAAAAACTGCATACAATACAGCTCGATGTGATCTCTA
 
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JMFN019O12+           CCGATTACAAAGCATTTTGAACATCTGTGATCATGTCATAGATGATATACATACATGTTA
JMFN008K09+           CCGATTACAAAGCATTTTGAACATCTGTGATCATGTCATAGATGATATACATACATGTTA
JMFN006M24+           CCGATTACAAAGCATTTTGAACATCTGTGATCATGTCATAGATGATATACATACATGTTA
                      ____________________________________________________________
consensus             CCGATTACAAAGCATTTTGAACATCTGTGATCATGTCATAGATGATATACATACATGTTA
 
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JMFN019O12+           TCCATTTCCTTCCAGGTTGGGATGTACATTACATTAATCACCCTCTAAAACAGCTAAAGT
JMFN008K09+           TCCATTTCCTTCCAGGTTGGGATGTACATTACATTAATCACCCTCTAAAACAGCTAAAGT
JMFN006M24+           TCCATTTCCTTCCAGGTTGGGATGTACATTACATTAATCACCCTCTAAAACAGCTAAAGT
                      ____________________________________________________________
consensus             TCCATTTCCTTCCAGGTTGGGATGTACATTACATTAATCACCCTCTAAAACAGCTAAAGT
 
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JMFN019O12+           AGGAAAGAAACCACTTTTTCCTCTTAAGAGAAGCATCCTCAGAAATGGCGGCAAAAGTAG
JMFN008K09+           AGGAAAGAAACCACTTTTTCCTCTTAAGAGAAGCATCCTCAGAAATGGCGGCAAAAGTAG
JMFN006M24+           AGGAAAGAAACCACTTTTTCCTCTTAAGAGAAGCATCCTCAGAAATGGCGGCAAAAGTAG
                      ____________________________________________________________
consensus             AGGAAAGAAACCACTTTTTCCTCTTAAGAGAAGCATCCTCAGAAATGGCGGCAAAAGTAG
 
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JMFN019O12+           TGTTCTGATGATGATGAGGTTGATAATGTTGTTGTTTATAGTGGGGAGGCGGGGCTGAGA
JMFN008K09+           TGTTCTGATGATGATGAGGTTGATAATGTTGTTGTTTATAGTGGGGAGGCGGGGCTGAGA
JMFN006M24+           TGTTCTGATGATGATGAGGTTGATAATGTTGTTGTTTATAGTGGGGAGGCGGGGCTGAGA
                      ____________________________________________________________
consensus             TGTTCTGATGATGATGAGGTTGATAATGTTGTTGTTTATAGTGGGGAGGCGGGGCTGAGA
 
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JMFN019O12+           AGGCGGAAATATGAGGGGGAGGGGGAGGGGGTGGGTGAGTGGGTAATTCGCTCTTGTGTT
JMFN008K09+           AGGCGGAAATATGAGGGGGAGGGGGAGGGGGTGGGTGAGTGGGTAATTCGCTCTTGTGTT
JMFN006M24+           AGGCGGAAATATGAGGGGGAGGGGGAGGGGGTGGGTGAGTGGGTAATTCGCTCTTGTGTT
                      ____________________________________________________________
consensus             AGGCGGAAATATGAGGGGGAGGGGGAGGGGGTGGGTGAGTGGGTAATTCGCTCTTGTGTT
 
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JMFN019O12+           GCTTCCTGTCCTCTCTGGCTTGCGTAAAAACTAGTGTGTAATTTGTACACTCCTCGCCGC
JMFN008K09+           GCTTCCTGTCCTCTCTGGCTTGCGTAAAAACTAGTGTGTAATTTGTACACTCCTCGCCGC
JMFN006M24+           GCTTCCTGTCCTCTCTGGCTTGCGTAAAAACTAGTGTGTAATTTGTACACTCCTCGCCGC
                      ____________________________________________________________
consensus             GCTTCCTGTCCTCTCTGGCTTGCGTAAAAACTAGTGTGTAATTTGTACACTCCTCGCCGC
 
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JMFN019O12+           CTCCTTTCTTCTGATCCCATCCCCCAAATTGTGGCACTGATGACCTCCGAGGCCTCTCCT
JMFN008K09+           CTCCTTTCTTCTGATCCCATCCCCCAAATTGTGGCACTGATGACCTCCGAGGCCTCTCCT
JMFN006M24+           CTCCTTTCTTCTGATCCCATCCCCCAAATTGTGGCACTGATGACCTCCGAGGCCTCTCCT
                      ____________________________________________________________
consensus             CTCCTTTCTTCTGATCCCATCCCCCAAATTGTGGCACTGATGACCTCCGAGGCCTCTCCT
 
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JMFN019O12+           CCCTATGGACATCCATGGCGGGGTACGGTGGAGATGGAGGATAGGAGAATGGT       
JMFN008K09+           CCCTATGGACATCCATGGCGGGGTACGGTGGAGATGGAGGATAGGAGAATGGT       
JMFN006M24+           CCCTATGGACATCCATGGCGGGGTACGGTGGAGATGGAGGATAGGAGAATGGTTAGGGAT
                      ____________________________________________________________
consensus             CCCTATGGACATCCATGGCGGGGTACGGTGGAGATGGAGGATAGGAGAATGGTTAGGGAT