Contig 011661:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001I08Sequence485011661 (4)emb|CBI32808.3|2e-89unnamed protein product [Vitis vinifera]670009596 (2)gb|ACF83522.1|1e-99unknown [Zea mays]
JMFN002F08Sequence573011661 (4)emb|CBI32808.3|3e-116unnamed protein product [Vitis vinifera]
JMFN019O11Sequence619011661 (4)emb|CBI32808.3|1e-116unnamed protein product [Vitis vinifera]
JMSF028K20Sequence459011661 (4)emb|CBI32808.3|1e-80unnamed protein product [Vitis vinifera]703009596 (2)gb|ACF83522.1|2e-116unknown [Zea mays]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN019O11+ TCAACCACGGTATCCGACACCTTTGGTGATGGG
JMFN002F08+ TCAACCACGGTATCCGACACCTTTGGTGATGGG
                      ____________________________________________________________
consensus TCAACCACGGTATCCGACACCTTTGGTGATGGG
 
. : . : . : . : . : . :
JMFN019O11+ AACACAGAGAACGTGAGCATCATTCTATCAGGGTATTCCTCTCTGATCTTCGAGATCAGC
JMFN002F08+ AACACAGAGAACGTGAGCATCATTCTATCAGGGTATTCCTCTCTGATCTTCGAGATCAGC
                      ____________________________________________________________
consensus AACACAGAGAACGTGAGCATCATTCTATCAGGGTATTCCTCTCTGATCTTCGAGATCAGC
 
. : . : . : . : . : . :
JMFN019O11+ AGGGTACCCATACCCGAACCTGTTCCACCACCGAGGGAGTGGCAAACCTGGAAACCTTGA
JMFN002F08+ AGGGTACCCATACCCGAACCTGTTCCACCACCGAGGGAGTGGCAAACCTGGAAACCTTGA
                      ____________________________________________________________
consensus AGGGTACCCATACCCGAACCTGTTCCACCACCGAGGGAGTGGCAAACCTGGAAACCTTGA
 
. : . : . : . : . : . :
JMFN019O11+ AGGCAGTCAGAGTTCTCAGCTTCCTTCCTCACAACATCAAGAACCGAGTCAATAAGCTCT
JMFF001I08+ AGGCAGTCAGAGTTCTCAGCTTCCTTCCTCACAACATCAAGAACCGAGTCAATAAGCTCT
JMSF028K20+ TCACAACATCAAGANCCGAGTCAATAAGCTNT
JMFN002F08+ AGGCAGTCAGAGTTCTCAGCTTCCTTCCTCACAACATCAAGAACCGAGTCAATAAGCTCT
                      ____________________________________________________________
consensus AGGCAGTCAGAGTTCTCAGCTTCCTTCCTCACAACATCAAGAACCGAGTCAATAAGCTCT
 
. : . : . : . : . : . :
JMFN019O11+ GCACCTTCGGTATAGTGCCCTTTGGCCCAGTTGTTTCCAGCACCAGACTGACCAAACACA
JMFF001I08+ GCACCTTCGGTATAGTGCCCTTTGGCCCAGTTGTTTCCAGCACCAGACTGACCAAACACA
JMSF028K20+ GCACCTTCGGTATAGTGCCCTTTGGCCCAGTTGTTTCCAGCACCAGACTGACCAAACACA
JMFN002F08+ GCACCTTCGGTATAGTGCCCTTTGGCCCAGTTGTTTCCAGCACCAGACTGACCAAACACA
                      ____________________________________________________________
consensus GCACCTTCGGTATAGTGCCCTTTGGCCCAGTTGTTTCCAGCACCAGACTGACCAAACACA
 
. : . : . : . : . : . :
JMFN019O11+ AAGTTATCAGGCCTAAAGATCTGGCCATAAGGACCCGTCCTAACGCTGTCCATCGTGCCG
JMFF001I08+ AAGTTATCAGGCCTAAAGATCTGGCCATAAGGACCCGTCCTAACGCTGTCCATCGTGCCG
JMSF028K20+ AAGTTATCAGGCCTAAAGATCTGGCCATAAGGACCCGTCCTAACGCTGTCCATCGTGCCG
JMFN002F08+ AAGTTATCAGGCCTAAAGATCTGGCCATAAGGACCCGTCCTAACGCTGTCCATCGTGCCG
                      ____________________________________________________________
consensus AAGTTATCAGGCCTAAAGATCTGGCCATAAGGACCCGTCCTAACGCTGTCCATCGTGCCG
 
. : . : . : . : . : . :
JMFN019O11+ GGCTCAAGATCCATGAGCACAGCACGAGGAACAAATCGTCCACAGGATGCCTCATTGTAA
JMFF001I08+ GGCTCAAGATCCATGAGCACAGCACGAGGAACAAATCGTCCACAGGATGCCTCATTGTAA
JMSF028K20+ GGCTCAAGATCCATGAGCACAGCACGAGGAACAAATCGTCCACAGGATGCCTCATTGTAA
JMFN002F08+ GGCTCAAGATCCATGAGCACAGCACGAGGAACAAATCGTCCACAGGATGCCTCATTGTAA
                      ____________________________________________________________
consensus GGCTCAAGATCCATGAGCACAGCACGAGGAACAAATCGTCCACAGGATGCCTCATTGTAA
 
. : . : . : . : . : . :
JMFN019O11+ TACACATTCACACGCTCCAATTGCAAATCAGAGGTTCCAACATATCGCCCAGTCGGATCT
JMFF001I08+ TACACATTCACACGCTCCAATTGCAAATCAGAGGTTCCAACATATCGCCCAGTCGGATCT
JMSF028K20+ TACACATTCACACGCTCCAATTGCAAATCAGAGGTTCCAACATATCGCCCAGTCGGATCT
JMFN002F08+ TACACATTCACACGCTCCAATTGCAAATCAGAGGTTCCAACATATCGCCCAGTCGGATCT
                      ____________________________________________________________
consensus TACACATTCACACGCTCCAATTGCAAATCAGAGGTTCCAACATATCGCCCAGTCGGATCT
 
. : . : . : . : . : . :
JMFN019O11+ ATGCCGTGCTCATCACAGACAACTTCCCAGAACTTGGATCCAATCTGATTTCCACACTGT
JMFF001I08+ ATGCCGTGCTCATCACAGACAACTTCCCAGAACTTGGATCCAATCTGATTTCCACACTGT
JMSF028K20+ ATGCCGTGCTCATCACAGACAACTTCCCAGAACTTGGATCCAATCTGATTTCCACACTGT
JMFN002F08+ ATGCCGTGCTCATCACAGACAACTTCCCAGAACTTGGATCCAATCTGATTTCCACACTGT
                      ____________________________________________________________
consensus ATGCCGTGCTCATCACAGACAACTTCCCAGAACTTGGATCCAATCTGATTTCCACACTGT
 
. : . : . : . : . : . :
JMFN019O11+ CCACCTTGAACGTGAAGGATTTCTCTCAT
JMFF001I08+ CCACCTTGAACGTGAAGGATTTCTCTCAT
JMSF028K20+ CCACCTTGAACGTGAAGGATTTCTCTCAT
JMFN002F08+ CCACCTTGAACGTGAAGGATTTCTCTCATGATTCCTCTTCAGAAAATAGGAAGCAATCTG
                      ____________________________________________________________
consensus CCACCTTGAACGTGAAGGATTTCTCTCATGATTCCTCTTCAGAAAATAGGAAGCAATCTG