Contig 011658:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051B06Sequence527011658 (4)ref|XP_010317678.1|4e-37PREDICTED: proton-coupled amino acid transporter 3-like [Solanum lycopersicum]400020261ref|XP_004232573.1|8e-26PREDICTED: proton-coupled amino acid transporter 3-like [Solanum lycopersicum]
JMSF007K01Sequence457011658 (4)ref|XP_004232573.1|7e-60PREDICTED: proton-coupled amino acid transporter 3-like [Solanum lycopersicum]754008673 (3)ref|XP_009801334.1|3e-78PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana sylvestris]
JMSF047B07Sequence727011658 (4)ref|XP_009588847.1|1e-113PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana tomentosifor621008673 (3)ref|XP_009801334.1|2e-66PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana sylvestris]
JMSF050B03Sequence688011658 (4)ref|XP_009588847.1|1e-120PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana tomentosifor744008673 (3)ref|XP_009801334.1|3e-93PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF050B03+ CCAAAGGCCTGCAGAACTGGCCTGTTCTG
JMSF047B07+ TTCTG
                      ____________________________________________________________
consensus CCAAAGGCCTGCAGAACTGGCCTGTTCTG
 
. : . : . : . : . : . :
JMSF050B03+ CAGGTACACCATTACATCCTCAACCATCACAGTACCCATGGCCCCCAAATCCACCACATC
JMSF047B07+ CAGGTACACCATTACATCNTCAACCATCACAGTACCCATGGCCCCCAAATCCACCACATC
                      ____________________________________________________________
consensus CAGGTACACCATTACATCCTCAACCATCACAGTACCCATGGCCCCCAAATCCACCACATC
 
. : . : . : . : . : . :
JMSF050B03+ AGCAAAGATACTCAATGGGGCTAAATGGGTAAGTGTCTGGATTGAGTTCAACCCAAGCTG
JMSF047B07+ AGCAAAGATACTCAATGGGGCTAAATGGGTAAGTGTCTGGATTGAGTTCAACCCAAGCTG
                      ____________________________________________________________
consensus AGCAAAGATACTCAATGGGGCTAAATGGGTAAGTGTCTGGATTGAGTTCAACCCAAGCTG
 
. : . : . : . : . : . :
JMSF050B03+ GAAAGGGAAACAGCTCCATACATACACAACTATTGGGGAAATCCCAATGATTTTAGGGTC
JMSF047B07+ GAAAGGGAAACAGCTCCATACATACACAACTATTGGGGAAATCCCAATGATTTTAGGGTC
                      ____________________________________________________________
consensus GAAAGGGAAACAGCTCCATACATACACAACTATTGGGGAAATCCCAATGATTTTAGGGTC
 
. : . : . : . : . : . :
JMSF050B03+ TGGGTTGGTGACAGTTTCATGGTTAAATATGTTTGCTAAAGTGCTGGCTATGAAAATCAT
JMSF047B07+ TGGGTTGGTGACAGTTTCATGGTTAAATATGTTTGCTAAAGTGCTGGCTATGAAAATCAT
                      ____________________________________________________________
consensus TGGGTTGGTGACAGTTTCATGGTTAAATATGTTTGCTAAAGTGCTGGCTATGAAAATCAT
 
. : . : . : . : . : . :
JMSF050B03+ GTAACTTACACAGAACCCAGCTTGGGAGAGAACAATCATAGCATCAACTGCAGCCCTTCC
JMSF007K01+ TAGCATCAACTGCAGCCCTTCC
JMSF047B07+ GTAACTTACACAGAACCCAGCTTGGGAGAGAACAATCATAGCATCAACTGCAGCCCTTCC
                      ____________________________________________________________
consensus GTAACTTACACAGAACCCAGCTTGGGAGAGAACAATCATAGCATCAACTGCAGCCCTTCC
 
. : . : . : . : . : . :
JMSF050B03+ AACAGGCCCACACACAGCAAACCCCAGATCTCCAAAAGATGAGATCTTGAAGGCCTTCTT
JMSF007K01+ AACAGGCCCACACACAGCAAACCCCAGATCTCCAAAAGATGAGATCTTGAAGGCCTTCTT
JMSF047B07+ AACAGGCCCACACACAGCAAACCCCAGATCTCCAAAAGATGAGATCTTGAAGGCCTTCTT
                      ____________________________________________________________
consensus AACAGGCCCACACACAGCAAACCCCAGATCTCCAAAAGATGAGATCTTGAAGGCCTTCTT
 
. : . : . : . : . : . :
JMSF050B03+ GGGGTGAGATTCGAGCTTCCTTCTTGAATTGACTAAGAGCATCATGCAGTAGTAGGTCAA
JMSF007K01+ GGGGTGAGATTCGAGCTTCCTTCTTGAATTGACTAAGAGCATCATGCAGTAGTAGGTCAA
JMSF047B07+ GGGGTGAGATTCGAGCTTCCTTCTTGAATTGACTAAGAGCATCATGCAGTAGTAGGTCAA
                      ____________________________________________________________
consensus GGGGTGAGATTCGAGCTTCCTTCTTGAATTGACTAAGAGCATCATGCAGTAGTAGGTCAA
 
. : . : . : . : . : . :
JMSF050B03+ GAAGGCGACGGAGAAGAGGAGGATGACTCCCATGGCCCACCCTGTTCTCCTGAAAGTGTA
JMSF007K01+ GAAGGCGACGGAGAAGAGGAGGATGACTCCCATGGCCCACCCTGTTCTCCTGAAAGTGTA
JMSF047B07+ GAAGGCGACGGAGAAGAGGAGGATGACTCCCATGGCCCACCCTGTTCTCCTGAAAGTGTA
JMFF051B06+ CCCACCCTGTTCTCTTGAAGGTGTA
                      ____________________________________________________________
consensus GAAGGCGACGGAGAAGAGGAGGATGACTCCCATGGCCCACCCTGTTCTCCTGAAAGTGTA
 
. : . : . : . : . : . :
JMSF050B03+ AGGGAGGCCAAGAACACCCGCCCCAACTATGGCTATGAACACATTGGCGAAGGTCTT
JMSF007K01+ AGGGAGGCCAAGAACACCCGCCCCAACTATGGCTATGAACACATTGGCGAAGGTCTT
JMSF047B07+ AGGGAGGCCAAGAACACCCGCCCCAACTATGGCTATGAACACATTGGCGAAGGTCTT
JMFF051B06+ AGGAAGGCCAAGCACACCCGCCCCCACTATTGCTATGAAAACATTGGCAAAGGTCTTGAA
                      ____________________________________________________________
consensus AGGGAGGCCAAGAACACCCGCCCCAACTATGGCTATGAACACATTGGCGAAGGTCTTGAA
 
. : . : . : . : . : . :
JMFF051B06+ TGAAGACGACAGGCGCTTGTGATCGGAAAGGAGTGGGGTGTCTTCTCTGGGGATGTGGAG
                      ____________________________________________________________
consensus TGAAGACGACAGGCGCTTGTGATCGGAAAGGAGTGGGGTGTCTTCTCTGGGGATGTGGAG
 
. : . : . : . : . : . :
JMFF051B06+ GACATAGGAGGATGAACTCGCTTCATCTTTCTCAAGCCCCATTGTATCCTAATTGGTCGC
                      ____________________________________________________________
consensus GACATAGGAGGATGAACTCGCTTCATCTTTCTCAAGCCCCATTGTATCCTAATTGGTCGC
 
. : . : . : . : . : . :
JMFF051B06+ CCTTAGAAACCCTAGAAACCCAGGAAACCCAATTGAGGCAGCTTCTCTGAATCTCTGAAT
                      ____________________________________________________________
consensus CCTTAGAAACCCTAGAAACCCAGGAAACCCAATTGAGGCAGCTTCTCTGAATCTCTGAAT
 
. : . : . : . : . : . :
JMFF051B06+ CGCTGAATCTCTGGATAATTAAGGAATTATGGATCAAGAAAATAAGAAACGCTGTATCAA
                      ____________________________________________________________
consensus CGCTGAATCTCTGGATAATTAAGGAATTATGGATCAAGAAAATAAGAAACGCTGTATCAA
 
. : . : . : . : . : . :
JMFF051B06+ ATAATTCAAATCAACTGATTAACTTTTCGCTATCTTTCTTGATCAAATTTGCTTCAGAAA
                      ____________________________________________________________
consensus ATAATTCAAATCAACTGATTAACTTTTCGCTATCTTTCTTGATCAAATTTGCTTCAGAAA
 
. : . : . : . : . : . :
JMFF051B06+ ATGAGCAGAAAGAATGGGATTAGAGAATAATGGCAGGGTGGAAAATAGAGGCGTGATGGT
                      ____________________________________________________________
consensus ATGAGCAGAAAGAATGGGATTAGAGAATAATGGCAGGGTGGAAAATAGAGGCGTGATGGT