clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF002I22 | Sequence | 488 | 011657 (6) | gb|ABB40579.2| | 2e-64 | 1-aminocyclopropane-1-carboxylate synthase [Ipomoea nil] | 743 | 004035 (4) | gb|ABB40579.2| | 7e-117 | 1-aminocyclopropane-1-carboxylate synthase [Ipomoea nil] |
JMFF020F11 | Sequence | 581 | 011657 (6) | gb|ABB40579.2| | 4e-88 | 1-aminocyclopropane-1-carboxylate synthase [Ipomoea nil] | 734 | 004035 (4) | gb|ABB40579.2| | 6e-117 | 1-aminocyclopropane-1-carboxylate synthase [Ipomoea nil] |
JMFF021F23 | Sequence | 547 | 011657 (6) | gb|ABB40579.2| | 5e-98 | 1-aminocyclopropane-1-carboxylate synthase [Ipomoea nil] | 566 | 014846 | gb|ABB40579.2| | 1e-12 | 1-aminocyclopropane-1-carboxylate synthase [Ipomoea nil] |
JMFF026G16 | Sequence | 517 | 011657 (6) | gb|ABB40579.2| | 4e-72 | 1-aminocyclopropane-1-carboxylate synthase [Ipomoea nil] | 828 | 004035 (4) | gb|ABB40579.2| | 2e-128 | 1-aminocyclopropane-1-carboxylate synthase [Ipomoea nil] |
JMFF030G19 | Sequence | 446 | 011657 (6) | gb|ABB40579.2| | 8e-57 | 1-aminocyclopropane-1-carboxylate synthase [Ipomoea nil] | 638 | 004035 (4) | gb|ABB40579.2| | 3e-92 | 1-aminocyclopropane-1-carboxylate synthase [Ipomoea nil] |
JMFF051A19 | Sequence | 635 | 011657 (6) | gb|ABB40579.2| | 3e-95 | 1-aminocyclopropane-1-carboxylate synthase [Ipomoea nil] |
This contig is upended
. : . : . : . : . : . :
JMFF051A19+ TCAAAACCAGGATAATATGGAGTGGGACCAAAAAT
____________________________________________________________
consensus TCAAAACCAGGATAATATGGAGTGGGACCAAAAAT
. : . : . : . : . : . :
JMFF020F11+ CCAAACAGAAGGCCAGTGCTTCATGAGCTCCGGTGGCACCTCCG
JMFF021F23+ CCAAACAGAAGGCCAGTATTTCATGAGCTCCGGTGGCACCTCCG
JMFF051A19+ GCTTCGCCGGGATTCACCAAACAGAAGGCCAGTGCTTCATGAGCTCCGGTGGCACCTCCG
____________________________________________________________
consensus GCTTCGCCGGGATTCACCAAACAGAAGGCCAGTGCTTCATGAGCTCCGGTGGCACCTCCG
. : . : . : . : . : . :
JMFF020F11+ CTCATAACGATCCTGTCGGGGTCGAATTTCACTGTGTCTCCCCTTACTTTCTCCATGAAT
JMFF002I22+ TCTCCATGAAT
JMFF026G16+ GTCGAATTTCACTGTGTCTCCCCTTACTTTCTCCATGAAT
JMFF021F23+ CTCATAACGATCCTATCCGGATCAAATTTCACTGTGTCTCCCCTCACTTTCTCCATGAAT
JMFF051A19+ CTCATAACGATCCTGTCGGGGTCGAATTTCACTGTGTCTCCCCTTACTTTCTCCATGAAT
____________________________________________________________
consensus CTCATAACGATCCTGTCGGGGTCGAATTTCACTGTGTCTCCCCTTACTTTCTCCATGAAT
. : . : . : . : . : . :
JMFF020F11+ CTTGCAACAGCACATCTAAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
JMFF002I22+ CTTGCAACAGCACATCTAAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
JMFF030G19+ CATGGTAGTCTTGATAAATAGCAATATCT
JMFF026G16+ CTTGCAACAGCACATCTAAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
JMFF021F23+ CTTGCCACAGCAGTTCTGAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
JMFF051A19+ CTTGCAACAGCACATCTAAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
____________________________________________________________
consensus CTTGCAACAGCACATCTAAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
. : . : . : . : . : . :
JMFF020F11+ TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
JMFF002I22+ TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
JMFF030G19+ TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
JMFF026G16+ TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
JMFF021F23+ TTGAACTCTTCTGCCCCTTGGGGCGTACAAATGGAGGCTTTGGGGTTATTCAATACCCAG
JMFF051A19+ TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
____________________________________________________________
consensus TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
. : . : . : . : . : . :
JMFF020F11+ TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
JMFF002I22+ TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
JMFF030G19+ TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
JMFF026G16+ TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
JMFF021F23+ TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATCTGGATAACACCCTGA
JMFF051A19+ TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
____________________________________________________________
consensus TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
. : . : . : . : . : . :
JMFF020F11+ GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
JMFF002I22+ GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
JMFF030G19+ GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
JMFF026G16+ GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
JMFF021F23+ GGATTATGTTTGGGATGGAAAGGGTTATTATCATAAGCCTTCCAACCATCAAAGTAGGCC
JMFF051A19+ GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
____________________________________________________________
consensus GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
. : . : . : . : . : . :
JMFF020F11+ GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
JMFF002I22+ GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
JMFF030G19+ GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
JMFF026G16+ GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
JMFF021F23+ GAGTTTTCTCCGTGTCCATCGTTGGTAGCAATTTTGGACAA
JMFF051A19+ GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
____________________________________________________________
consensus GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
. : . : . : . : . : . :
JMFF020F11+ GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
JMFF002I22+ GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
JMFF030G19+ GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
JMFF026G16+ GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
JMFF051A19+ GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
____________________________________________________________
consensus GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
. : . : . : . : . : . :
JMFF020F11+ AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
JMFF002I22+ AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
JMFF030G19+ AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
JMFF026G16+ AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
JMFF051A19+ AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
____________________________________________________________
consensus AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
. : . : . : . : . : . :
JMFF020F11+ GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGT
JMFF002I22+ GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGT
JMFF030G19+ GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGT
JMFF026G16+ GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGT
JMFF051A19+ GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGTGACCGG
____________________________________________________________
consensus GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGTGACCGG