Contig 011656:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP020E12Sequence150011656 (6)
JMFF035E16Sequence633011656 (6)ref|XP_008337406.1|4e-92PREDICTED: LOW QUALITY PROTEIN: NADH-cytochrome b5 reductase-like protein [Malu
JMFF050N07Sequence630011656 (6)ref|XP_008337406.1|7e-86PREDICTED: LOW QUALITY PROTEIN: NADH-cytochrome b5 reductase-like protein [Malu614011656 (6)ref|XP_009768340.1|9e-55PREDICTED: NADH-cytochrome b5 reductase-like protein, partial [Nicotiana sylves
JMSF026I02Sequence648007891 (39)ref|XP_006365107.1|4e-42PREDICTED: glycine-rich RNA-binding protein 7-like isoform X2 [Solanum tuberosu739011656 (6)ref|XP_009768340.1|1e-86PREDICTED: NADH-cytochrome b5 reductase-like protein, partial [Nicotiana sylves
JMSF036K21Sequence659018979ref|XP_006450977.1|2e-99hypothetical protein CICLE_v10008900mg [Citrus clementina] gb|ESR64217.1| hypoth674011656 (6)ref|XP_009768340.1|8e-116PREDICTED: NADH-cytochrome b5 reductase-like protein, partial [Nicotiana sylves

Alignment

This contig is upended


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rJMCP020E12+                                                                 ACACA
rJMFF050N07-                                    ACCCTGGAGAGXXXXXXXXXXXXXXXXXXACACA
rJMSF026I02-                                                                  CACA
                      ____________________________________________________________
consensus                                       ACCCTGGAGAGNNNNNNNNNNNNNNNNNNACACA
 
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rJMCP020E12+          ATCCATTTGCATTTCCCACAAGCGATAAACACAAATCAAGTAACGAAATCAGAGAATCTG
rJMFF050N07-          ATCCATTTGCATTTCCCACAAGCGATAAACACAAATCAAGTAACGAAATCAGAGAATCTG
rJMSF026I02-          ATCCATTTGCATTTCCCACAAGCGATAAACACAAATCAAGTAACGAAATCAGAGAATCNG
                      ____________________________________________________________
consensus             ATCCATTTGCATTTCCCACAAGCGATAAACACAAATCAAGTAACGAAATCAGAGAATCTG
 
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rJMCP020E12+          TTGATATTTTCTTATGGGAAGGCCTCAAAAAAAGTAAAACTAAGCTAAACTAGAAA    
rJMFF050N07-          TTGATATTTTCTTATGGGAAGGCCTCAAAAAAAGTAAAACTAAGCTAAACTAGAAACACT
rJMSF026I02-          TTGATATTTTCTTANGGGAAGGCCTCAAAAAAAGTAAAACTAAGCTAAACTAGAAACACT
                      ____________________________________________________________
consensus             TTGATATTTTCTTATGGGAAGGCCTCAAAAAAAGTAAAACTAAGCTAAACTAGAAACACT
 
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rJMFF050N07-          CTGCTCAATACAACTCTCAAATTTTGCTGTAAAGAGTTTAGTTTGCCTTCTTCAAAATTC
rJMSF026I02-          CNGCTCAATACAACTCTCAAATTTTGCTGTAAAGAGTTTAGTTTGCCTTCTTCAAAATTC
rJMSF036K21-                                                                AAATTC
                      ____________________________________________________________
consensus             CTGCTCAATACAACTCTCAAATTTTGCTGTAAAGAGTTTAGTTTGCCTTCTTCAAAATTC
 
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rJMFF050N07-          ATTTATTTGAGAACTGCGAGAATCAACTAGTTGCAACTACAGAACTACTATCAGAACTTG
rJMSF026I02-          ATTTATTTGAGAACTGCGAGAATCAACTAGTTGCAACTACAGAACTACTATCAGAACTTG
rJMSF036K21-          ATTTATTTGAGAACTGCGAGAATCAACTAGTTGCAACTACAGAACTACTATCAGAACTTG
                      ____________________________________________________________
consensus             ATTTATTTGAGAACTGCGAGAATCAACTAGTTGCAACTACAGAACTACTATCAGAACTTG
 
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rJMFF050N07-          TAAACCATGTTTTCTGTGTATCCAACTTCTTTGAGTACGCCACTCAGCTCTCCTTGTTCT
rJMSF026I02-          TAAACCATGTTTTCTGNGTATCCAACTTCTTTGAGTACGCCACTCAGCTCTCCTTGTTCT
rJMSF036K21-          TAAACCATGTTTTCTGTGTATCCAACTTCTTTGAGTACGCCACTCAGCTCTCCTTGTTCT
                      ____________________________________________________________
consensus             TAAACCATGTTTTCTGTGTATCCAACTTCTTTGAGTACGCCACTCAGCTCTCCTTGTTCT
 
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rJMFF050N07-          CTCTTATCTTTTTCTCCAGATACATGTGTCATCATCCCAGGAGGACCGCATACAAAGATA
rJMSF026I02-          CTCTTATCTTTTTCTCCAGATACATGTGTCATCATCCCAGGAGGACCGCATACAAAGATA
rJMSF036K21-          CTCTTATCTTTTTCTCCAGATACATGTGTCATCATCCCAGGAGGACCGCATACAAAGATA
                      ____________________________________________________________
consensus             CTCTTATCTTTTTCTCCAGATACATGTGTCATCATCCCAGGAGGACCGCATACAAAGATA
 
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rJMFF050N07-          AGTGTATCATCACTAGGAGGAGGCAACCCTTTGACGACCATATCCTTTGATATAAAACCA
rJMSF026I02-          AGTGTATCATCACTAGGAGGAGGCAACCCTTTGACGACCATATCCTTTGATATAAAACCA
rJMSF036K21-          AGTGTATCATCACTAGGAGGAGGCAACCCTTTGACGACCATATCCTTTGATATAAAACCA
                      ____________________________________________________________
consensus             AGTGTATCATCACTAGGAGGAGGCAACCCTTTGACGACCATATCCTTTGATATAAAACCA
 
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rJMFF050N07-          GAGCCTCCTCTCCACTCCTTTGTTGGACTATCTACAGTGTAGAATACCTTAAGATTTGGA
rJMSF026I02-          GAGCCTCCTCTCCACTCCTTTGTTGGACTATCTACAGNGTAGAATACCTTAAGATTTGGA
rJMSF036K21-          GAGCCTCCTCTCCACTCCTTTGTTGGACTATCTACAGTGTAGAATACCTTAAGATTTGGA
                      ____________________________________________________________
consensus             GAGCCTCCTCTCCACTCCTTTGTTGGACTATCTACAGTGTAGAATACCTTAAGATTTGGA
 
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rJMFF050N07-          TGCGTTGCTGCAAGCACATCAAGCTTCTTTTTCAGAAGTATGTCATCAGGAGACACGTTA
rJMSF026I02-          TGCGTTGCTGCAAGCACATCAAGCTTCTTTTTCAGAAGTATGTCATCAGGAGACACGTTA
rJMSF036K21-          TGCGTTGCTGCAAGCACATCAAGCTTCTTTTTCAGAAGTATGTCATCAGGAGACACGTTA
                      ____________________________________________________________
consensus             TGCGTTGCTGCAAGCACATCAAGCTTCTTTTTCAGAAGTATGTCATCAGGAGACACGTTA
 
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rJMFF050N07-          GCATACAGCAACGAGATCTGAGTGTTGTCATCAGGATTCT                    
rJMSF026I02-          GCATACAGCAACGAGATCTGAGTGTTGTCATCAGGATTCTTGAGAATAGCCTCAATGACC
rJMSF036K21-          GCATACAGCAACGAGATCTGAGTGTTGTCATCAGGATTCTTGAGAATAGCCTCAATGACC
                      ____________________________________________________________
consensus             GCATACAGCAACGAGATCTGAGTGTTGTCATCAGGATTCTTGAGAATAGCCTCAATGACC
 
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rJMSF026I02-          TGGAGCATTGGGGTGATGCCACTGCCCCCTGCAATCATGCCAATGTGTTTCTTCATATTT
rJMSF036K21-          TGGAGCATTGGGGTGATGCCACTGCCCCCTGCAATCATGCCAATGTGTTTCTTCATATTT
JMFF035E16+                     GGGTGATGCCACTGCCCCCTGCAATCATGCCAATGTGTTTCTTCATATTT
JMFF050N07+                                         GCAATCATGCCAATGTGTTTCTTCATATTT
                      ____________________________________________________________
consensus             TGGAGCATTGGGGTGATGCCACTGCCCCCTGCAATCATGCCAATGTGTTTCTTCATATTT
 
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rJMSF026I02-          GGCCTATACTGGAGCTTCTGAATGGGCCCTTTTACTTCTACTTTGTCTCCAGGTTTTAGG
rJMSF036K21-          GGCCTATACTGGAGCTTCTGAATGGGCCCTTTTACTTCTACTTTGTCTCCAGGTTTTAGG
JMFF035E16+           GGCCTATACTGGAGCTTCTGAATGGGCCCTTTTACTTCTACTTTGTCTCCAGGTTTTAGG
JMFF050N07+           GGCCTATACTGGAGCTTCTGAATGGGCCCTTTTACTTCTACTTTGTCTCCAGGTTNTAGG
                      ____________________________________________________________
consensus             GGCCTATACTGGAGCTTCTGAATGGGCCCTTTTACTTCTACTTTGTCTCCAGGTTTTAGG
 
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rJMSF026I02-          CTNGCAAA                                                    
rJMSF036K21-          CTTGCAAAATGCTGACTCATTTTTCCTTCAGGGTAAACCTTGATTAAAAGGTCGAAGTGG
JMFF035E16+           CTTGCAAAATGCTGACTCATTTTTCCTTCAGGGTAAACCTTGATTAAAAGGTCGAAGTGG
JMFF050N07+           CTTGCAAAATGCTGACTCATTTTTCCTTCAGGGTAAACCTTGATTAAAAGGTCGAAGTGG
                      ____________________________________________________________
consensus             CTTGCAAAATGCTGACTCATTTTTCCTTCAGGGTAAACCTTGATTAAAAGGTCGAAGTGG
 
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rJMSF036K21-          CCCTTGGCATCAGGATCTGATATAGGTGTATAAGGGCGGATGACATATTTTGGTTTTC  
JMFF035E16+           CCCTTGGCATCAGGATCTGATATAGGTGTATAAGGGCGGATGACATATTTTGGTTTTCCT
JMFF050N07+           CCCTTGGCATCAGGATCTGATATAGGTGTATAAGGGCGGATGACATATTTTGGTTTTCCT
                      ____________________________________________________________
consensus             CCCTTGGCATCAGGATCTGATATAGGTGTATAAGGGCGGATGACATATTTTGGTTTTCCT
 
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JMFF035E16+           TCAGCATCTTGTTGTCCAATTGGTGCTCTTGTAATGATACATGACGCAATATCCAGACCT
JMFF050N07+           TCAGCATCTTGTTGTCCAATTGGTGCTCTTGTAATGATACATGACGCAATATCCAGACCT
                      ____________________________________________________________
consensus             TCAGCATCTTGTTGTCCAATTGGTGCTCTTGTAATGATACATGACGCAATATCCAGACCT
 
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JMFF035E16+           AGCTTTGCAGAGGGATCAAATGAAAACCTGAACAGATGAGTATTATGGCTAACAGGTGCC
JMFF050N07+           AGCTTTGCAGAGGGATCAAATGAAAACCTGAACAGATGAGTATTATGGCTAACAGGTGCC
                      ____________________________________________________________
consensus             AGCTTTGCAGAGGGATCAAATGAAAACCTGAACAGATGAGTATTATGGCTAACAGGTGCC
 
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JMFF035E16+           CTATCCTCCAGCTTAAATTCAATCCACTGATTAGGATTAAGAGCAGTTTTGCGGCTTGTA
JMFF050N07+           CTATCCTCCAGCTTAAATTCAATCCACTGATTAGGATTAAGAGCAGTTTTGCGGCTTGTA
                      ____________________________________________________________
consensus             CTATCCTCCAGCTTAAATTCAATCCACTGATTAGGATTAAGAGCAGTTTTGCGGCTTGTA
 
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JMFF035E16+           TCTTCATTGATTTGGTCCAAATACACCAAATTGGGCGAAGAAAAGTAGTAAAAGTAGGAG
JMFF050N07+           TCTTCATTGATTTGGTCCAAATACACCAAATTGGGCGAAGAAAAGTAGTAAAAGTAGGAG
                      ____________________________________________________________
consensus             TCTTCATTGATTTGGTCCAAATACACCAAATTGGGCGAAGAAAAGTAGTAAAAGTAGGAG
 
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JMFF035E16+           GCTCCGCCGGCTACCGCCGCAAAAGCGCCAAAAGGGAAGCGAAATCCGGCGAAGGTGGAC
JMFF050N07+           GCTCCGCCGGCTACCGCCGCAAAAGCGCCAAAAGGGAAGCGAAATCCGGCGAAGGTGGAC
                      ____________________________________________________________
consensus             GCTCCGCCGGCTACCGCCGCAAAAGCGCCAAAAGGGAAGCGAAATCCGGCGAAGGTGGAC
 
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JMFF035E16+           TTGGATTCGCCACGAAAAGCTTGAGAAAATGCGATCGGCGCAGCCTTCGCTAGTCTCTTA
JMFF050N07+           TTGGATTCGCCACGAAAAGCTTGAGAAAATGCGATCGGCGCAGCCTTCGCTAGTCTCTTA
                      ____________________________________________________________
consensus             TTGGATTCGCCACGAAAAGCTTGAGAAAATGCGATCGGCGCAGCCTTCGCTAGTCTCTTA
 
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JMFF035E16+           AACAAGAGTGACATTTTCAATGCTGTGAGGTGAAATGAAGTTC                 
JMFF050N07+           AACAAGAGTGACATTTTCAATGCTGTGAGGTGAAATGAAGTTCCAAGATTTATGTAGAAT
                      ____________________________________________________________
consensus             AACAAGAGTGACATTTTCAATGCTGTGAGGTGAAATGAAGTTCCAAGATTTATGTAGAAT