Contig 011651:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049D01Sequence647011651 (4)ref|XP_004231869.1|5e-78PREDICTED: protein IRX15-LIKE-like [Solanum lycopersicum]652011651 (4)emb|CDP02521.1|7e-05unnamed protein product [Coffea canephora]
JMSF028I03Sequence651011651 (4)ref|XP_006360212.1|1e-85PREDICTED: protein IRX15-like [Solanum tuberosum]739011651 (4)ref|XP_004231869.1|2e-121PREDICTED: protein IRX15-LIKE-like [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF049D01-                                                                  CCTT
                      ____________________________________________________________
consensus                                                                     CCTT
 
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rJMFF049D01-          ATGGCGGATCACCCTGGAGAGXXXXXXXXXXXXXXXXXXXAATGACGGGATGAAGAAGCA
                      ____________________________________________________________
consensus             ATGGCGGATCACCCTGGAGAGNNNNNNNNNNNNNNNNNNNAATGACGGGATGAAGAAGCA
 
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rJMFF049D01-          AAAGCGACATTCTGCTGGTAATTAGTTACAGAGTCGCTACAACCACACCAAATACTCTTT
                      ____________________________________________________________
consensus             AAAGCGACATTCTGCTGGTAATTAGTTACAGAGTCGCTACAACCACACCAAATACTCTTT
 
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rJMFF049D01-          CATTTTGCATTCCTTACCAGCTCCCTTCTCCAACCACTCTCTCTATTCTAGTCCTAAAAC
                      ____________________________________________________________
consensus             CATTTTGCATTCCTTACCAGCTCCCTTCTCCAACCACTCTCTCTATTCTAGTCCTAAAAC
 
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rJMFF049D01-          CCCAATCAACTGTAAACATTTCTTTACTATATGGTCTAACTGTCCATTTCATTTGTATAT
                      ____________________________________________________________
consensus             CCCAATCAACTGTAAACATTTCTTTACTATATGGTCTAACTGTCCATTTCATTTGTATAT
 
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rJMFF049D01-          CACTGAAATATAAAAACAAAAGGGTGGTTGAGCAATGGAAAATTGAGCACCCAATCACAG
                      ____________________________________________________________
consensus             CACTGAAATATAAAAACAAAAGGGTGGTTGAGCAATGGAAAATTGAGCACCCAATCACAG
 
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rJMFF049D01-          TGAATCTGATGATGTAAACCAAGTCAACTTCCTGCCTGCTGCACGGAAAGATTCCTCCCT
                      ____________________________________________________________
consensus             TGAATCTGATGATGTAAACCAAGTCAACTTCCTGCCTGCTGCACGGAAAGATTCCTCCCT
 
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rJMFF049D01-          CATTCCCATTTCCCAATCATTCCTATTGTCATCTTCATTTTACTTCTTTATAATTCACTG
                      ____________________________________________________________
consensus             CATTCCCATTTCCCAATCATTCCTATTGTCATCTTCATTTTACTTCTTTATAATTCACTG
 
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rJMFF049D01-          ATTCTCATACCCTCAGATCCATCCTACAAGTTTCTCCCTCCCTCCATCCATCCATCCATC
JMSF028I03-                               ATCCTACAAGTTTCTCCCTCCCTCCATCCATCCATCCATC
                      ____________________________________________________________
consensus             ATTCTCATACCCTCAGATCCATCCTACAAGTTTCTCCCTCCCTCCATCCATCCATCCATC
 
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rJMFF049D01-          CCTGCATAGCCNAAAATTAAGTGAAGAAGATGAAGAACAATCTTGGCACCAATACCAAGT
JMSF028I03-           CCTGCATAGCCAAAAATTAAGTGAAGAAGATGAAGAACAATCTTGGCACCAATACCAAGT
                      ____________________________________________________________
consensus             CCTGCATAGCCAAAAATTAAGTGAAGAAGATGAAGAACAATCTTGGCACCAATACCAAGT
 
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rJMFF049D01-          TTATACTTCTTCACCCTTACATTCAGAAACAGGGTGGTACCAACCGAGTGTGGATTCTGG
JMSF028I03-           TTATACTTCTTCACCCTTACATTCAGAAACAGGGTGGTACCAACCGAGTGTGGATTCTGG
                      ____________________________________________________________
consensus             TTATACTTCTTCACCCTTACATTCAGAAACAGGGTGGTACCAACCGAGTGTGGATTCTGG
 
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rJMFF049D01-          CTTTCGTTTCATTCTTCGCGGTTGCGTTCCTGCTTACCCTCTTCTACG            
JMSF028I03-           CTTTCGTTTCATTCTTCGC-GTTGCGTTCCTGCTTACCCTCTTCTACGCAAGAGACTACA
                      ____________________________________________________________
consensus             CTTTCGTTTCATTCTTCGCGGTTGCGTTCCTGCTTACCCTCTTCTACGCAAGAGACTACA
 
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JMSF028I03-           TTCCCACAACCTCTGCTCCTGTTATCTCTGCCACCACCACAGCTGCTGCCAATGCTCCAC
                      ____________________________________________________________
consensus             TTCCCACAACCTCTGCTCCTGTTATCTCTGCCACCACCACAGCTGCTGCCAATGCTCCAC
 
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JMSF028I03-           TCTCCAAGTTGGTGGCCAGGGCGCTTGCCCATTATGCTTCCAACTCCAACAACACTGACC
                      ____________________________________________________________
consensus             TCTCCAAGTTGGTGGCCAGGGCGCTTGCCCATTATGCTTCCAACTCCAACAACACTGACC
 
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JMSF028I03-           GCATGTCATACACAGATATCAAACAGATTTCTGATGTCCTCCGCCAGTGCTCTCAGCCCT
                      ____________________________________________________________
consensus             GCATGTCATACACAGATATCAAACAGATTTCTGATGTCCTCCGCCAGTGCTCTCAGCCCT
 
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JMSF028I03-           GTAATTTCCTTGTTTTTGGCCTCACACATGAGACCCTTCTCTGGCAAGCTCTCAACCACA
rJMSF028I03+                               TCACACATGAGACCCTTCTCTGGCAAGCTCTCAACCACA
                      ____________________________________________________________
consensus             GTAATTTCCTTGTTTTTGGCCTCACACATGAGACCCTTCTCTGGCAAGCTCTCAACCACA
 
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JMSF028I03-           ATGGTCGAACAGTATTCATTGATGAAAACAGGTACTACGCTGCTTACATTGAAGAAAAGT
rJMSF028I03+          ATGGTCGAACAGTATTCATTGATGAAAACAGGTACTACGCTGCTTACATTGAAGAAAAGT
                      ____________________________________________________________
consensus             ATGGTCGAACAGTATTCATTGATGAAAACAGGTACTACGCTGCTTACATTGAAGAAAAGT
 
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JMSF028I03-           ACCCGGAAGTTGAAGCCTATGATGTTCAATACACAACCAAATTAAGCGAAATGAAGGATT
rJMSF028I03+          ACCCGGAAGTTGAAGCCTATGATGTTCAATACACAACCAAATTAAGCGAAATGAAGGATT
                      ____________________________________________________________
consensus             ACCCGGAAGTTGAAGCCTATGATGTTCAATACACAACCAAATTAAGCGAAATGAAGGATT
 
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JMSF028I03-           TAGTTTCGGCAGTCAAACAACAAGCACGCAACGAATGCAAGCCAGTGCAGAACCTACTCT
rJMSF028I03+          TAGTTTCGGCAGTCAAACAACAAGCACGCAACGAATGCAAGCCAGTGCAGAACCTACTCT
JMFF049D01+                        CAAACAACAAGCACGCAACGAATGCAAGCCAGTGCAGAACCTACTCT
                      ____________________________________________________________
consensus             TAGTTTCGGCAGTCAAACAACAAGCACGCAACGAATGCAAGCCAGTGCAGAACCTACTCT
 
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JMSF028I03-           TCTCTGAGTGT                                                 
rJMSF028I03+          TCTCTGAGTGTAAGCTTGGCCTCAACGATCTTCCTAATCAATTATATGAAGTGGATTGGG
JMFF049D01+           TCTCTGAGTGTAAGCTTGGCCTCAACGATCTTCCTAATCAATTATATGAAGTGGATTGGG
                      ____________________________________________________________
consensus             TCTCTGAGTGTAAGCTTGGCCTCAACGATCTTCCTAATCAATTATATGAAGTGGATTGGG
 
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rJMSF028I03+          ATGTTATATTGATTGACGGGCCACGAGGGTATTGGCCCGAGGCACCAGGAAGGATGTCAG
JMFF049D01+           ATGTTATATTGATTGACGGGCCACGAGGGTATTGGCCCGAGGCACCAGGAAGGATGTCAG
                      ____________________________________________________________
consensus             ATGTTATATTGATTGACGGGCCACGAGGGTATTGGCCCGAGGCACCAGGAAGGATGTCAG
 
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rJMSF028I03+          CAATCTTCACTGCAGGTGTGCTTGCCCGGAGCAAGAAGGGTGGCAACCCGAAAACACATG
JMFF049D01+           CAATCTTCACTGCAGGTGTGCTTGCCCGGAGCAAGAAGGGTGGCAACCCGAAAACACATG
                      ____________________________________________________________
consensus             CAATCTTCACTGCAGGTGTGCTTGCCCGGAGCAAGAAGGGTGGCAACCCGAAAACACATG
 
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rJMSF028I03+          TTCTAGTGCATGATTTCAACCAGAAAGTGGACAGGATGGTAAGTGATGAGTTCTTGTGCA
JMFF049D01+           TTCTAGTGCATGATTTCAACCAGAAAGTGGACAGGATGGTAAGTGATGAGTTCTTGTGCA
                      ____________________________________________________________
consensus             TTCTAGTGCATGATTTCAACCAGAAAGTGGACAGGATGGTAAGTGATGAGTTCTTGTGCA
 
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rJMSF028I03+          GGGAAAACTTGGTGAAGTCTGAGGACATGCTGGGGCACTTTGTCTTGGAAAAAATGGATG
JMFF049D01+           GGGAAAACTTGGTGAAGTCTGAGGACATGCTGGGGCACTTTGTCTTGGAAAAAATGGATG
                      ____________________________________________________________
consensus             GGGAAAACTTGGTGAAGTCTGAGGACATGCTGGGGCACTTTGTCTTGGAAAAAATGGATG
 
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rJMSF028I03+          CTAACTGCTATCAGTTCTGTCACAGCCACAACACAGCATAATCATCTTCTCAACCTTGTT
JMFF049D01+           CTAACTGCTATCAGTTCTGTCACAGCCACAACACAGCATAATCATCTTCTCAACCTTGTT
                      ____________________________________________________________
consensus             CTAACTGCTATCAGTTCTGTCACAGCCACAACACAGCATAATCATCTTCTCAACCTTGTT
 
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rJMSF028I03+          AAACCACCACCACCATCATCATTACAC                                 
JMFF049D01+           AAACCACCACCACCATCATCATTACACGGGAGTTGATGATTGGTTCCATTGCCAAAACTG
                      ____________________________________________________________
consensus             AAACCACCACCACCATCATCATTACACGGGAGTTGATGATTGGTTCCATTGCCAAAACTG
 
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JMFF049D01+           CTTCCGGCAATATGTTTAGATGCAGTAGGCTCCCCTGCGGTTTATAGAATCCAGTAATGC
                      ____________________________________________________________
consensus             CTTCCGGCAATATGTTTAGATGCAGTAGGCTCCCCTGCGGTTTATAGAATCCAGTAATGC
 
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JMFF049D01+           AATGTTTGGCTTTTTCCAAGGGATAGAAAGAGTAAAGCAGTATGGAGTTCATTAGGTGGC
                      ____________________________________________________________
consensus             AATGTTTGGCTTTTTCCAAGGGATAGAAAGAGTAAAGCAGTATGGAGTTCATTAGGTGGC
 
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JMFF049D01+           ATGAGAACTCCAGAACGGCTGCGCAACCCATCTCCGCCGCCTCTTGTGCCGGAAGCCCCC
                      ____________________________________________________________
consensus             ATGAGAACTCCAGAACGGCTGCGCAACCCATCTCCGCCGCCTCTTGTGCCGGAAGCCCCC