Contig 011637:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014F12Sequence556011637 (23)gb|AAB02052.1|3e-91manganese superoxide dismutase [Carica papaya]745011637 (23)gb|AAB02052.1|3e-107manganese superoxide dismutase [Carica papaya]
JMFF015K20Sequence572011637 (23)gb|AAB02052.1|4e-102manganese superoxide dismutase [Carica papaya]710011637 (23)gb|AAB02052.1|2e-77manganese superoxide dismutase [Carica papaya]
JMFF017O18Sequence563011637 (23)gb|AAB02052.1|3e-68manganese superoxide dismutase [Carica papaya]737011637 (23)gb|AAB02052.1|1e-81manganese superoxide dismutase [Carica papaya]
JMFF018C10Sequence555011637 (23)gb|AAB02052.1|3e-91manganese superoxide dismutase [Carica papaya]754011637 (23)gb|AAB02052.1|1e-109manganese superoxide dismutase [Carica papaya]
JMFF025D18Sequence577011637 (23)gb|AAB02052.1|2e-96manganese superoxide dismutase [Carica papaya]745011637 (23)gb|AAB02052.1|1e-109manganese superoxide dismutase [Carica papaya]
JMFF025H16Sequence575011637 (23)gb|AAB02052.1|9e-96manganese superoxide dismutase [Carica papaya]796011637 (23)gb|AAB02052.1|4e-124manganese superoxide dismutase [Carica papaya]
JMFF040I21Sequence522011637 (23)gb|AAB02052.1|1e-82manganese superoxide dismutase [Carica papaya]683011637 (23)gb|AAB02052.1|3e-73manganese superoxide dismutase [Carica papaya]
JMFF043C13Sequence630011637 (23)gb|AAB02052.1|2e-96manganese superoxide dismutase [Carica papaya]545011637 (23)gb|AAA85342.1|1e-45Mn-superoxide dismutase, partial [Ipomoea batatas]
JMFF047L16Sequence573011637 (23)gb|AAB02052.1|8e-90manganese superoxide dismutase [Carica papaya]
JMFF048I10Sequence421011637 (23)gb|ABH11434.2|3e-60Mn-superoxide dismutase II [Helianthus annuus]267011637 (23)
JMFF050D02Sequence629011637 (23)gb|AAB02052.1|6e-99manganese superoxide dismutase [Carica papaya]
JMFN008A20Sequence621011637 (23)gb|AAB02052.1|4e-116manganese superoxide dismutase [Carica papaya]
JMFN025I10Sequence618011637 (23)gb|AAB02052.1|3e-89manganese superoxide dismutase [Carica papaya]
JMFN029B19Sequence640011637 (23)gb|AAB02052.1|1e-120manganese superoxide dismutase [Carica papaya]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF048I10- CTTTTTTTTTTTTTTTTAGCAGA
                      ____________________________________________________________
consensus CTTTTTTTTTTTTTTTTAGCAGA
 
. : . : . : . : . : . :
rJMFF048I10- AAAACTCCTGCATTTTTCGATTTTAACTCTGTTGAAGTGATAAGTTTCACATCACAGTGT
rJMFF014F12- CTCCTGCATTTTTCGATTTTAACTCTGTTGAAGTGATAAGTTTCACATCACAGTGT
rJMFF015K20- CTCCTGCATTTTTCGATTTTAACTCTGTTGAAGTGATAAGTTTCACATCACAGTGT
rJMFF043C13- TGCATTTTTCTATTTTAACTCTGATAAAGCGATAAGTTTCACATCACAGTGT
rJMFF018C10- CTCCTGCATTTTTCGATTTTAACTCTGTTGAAGTGATAAGTTTCACATCACAGTGT
rJMFF017O18- TTTTTCGATTTTAACTCTGTTGAAGTGATAAGTTTCACATCACAGTGT
rJMFF040I21- ATTTTTCGATTTTAACTCTGTTGAAGTGATAAGTTTCACATCACAGTGT
JMFN025I10+ CAGTGT
rJMFF025D18- ATTTTTCGATTTTAACTCTGTTGAAGTGATAAGTTTCACATCACAGTGT
rJMFF025H16- TTTTTCGATTTTAACTCTGTTGAAGTGATAAGTTTCACATCACAGTGT
                      ____________________________________________________________
consensus AAAACTCCTGCATTTTTCGATTTTAACTCTGTTGAAGTGATAAGTTTCACATCACAGTGT
 
. : . : . : . : . : . :
rJMFF048I10- GCTAAAAGCAACAAAATCCACAAATACAACAATTTATTTACCATTACACAGAAAACAGAA
rJMFF014F12- GCTAAAAGCAACAAAATCCACAAATACAACAATTTATTTACCATTACACAGAAAACAGAA
rJMFF015K20- GCTAAAAGCAACAAAATCCACAAATACAACAATTTATTTACCATTACACAGAAAACAGAA
rJMFF043C13- GCTAAAAGCAACAAAATCCACAAATACAACAATTTATTTACCATTACACAGAAAACAAAA
rJMFF018C10- GCTAAAAGCAACAAAATCCACAAATACAACAATTTATTTACCATTACACAGAAAACAGAA
rJMFF017O18- GCTAAAAGCAACAAAATCCACAAATACAACAATTTATTTACCATTACACAGAAAACAGAA
rJMFF040I21- GCTAAAAGCAACAAAATCCACAAATACAACAATTTATTTACCATTACACAGAAAACAGAA
JMFN025I10+ GCTAAAAGCAACAAAATCCACAAATACAACAATTTATTTACCATTACACAGAAAACAGAA
rJMFF025D18- GCTAAAAGCAACAAAATCCACAAATACAACAATTTATTTACCATTACACAGAAAACAGAA
rJMFF025H16- GCTAAAAGCAACAAAATCCACAAATACAACAATTTATTTACCATTACACAGAAAACAGAA
                      ____________________________________________________________
consensus GCTAAAAGCAACAAAATCCACAAATACAACAATTTATTTACCATTACACAGAAAACAGAA
 
. : . : . : . : . : . :
rJMFF048I10- GCAACAACACTTCAGCAGAAAGCCGAAGCAAAGTTAACTTAGCATTATTTTATCCCACGG
rJMFF014F12- GCAACAACACTTCAGCAGAAAGCCGAAGCAAAGTTAACTTAGCATTATTTTATCCCACGG
rJMFF015K20- GCAACAACACTTCAGCAGAAAGCCGAAGCAAAGTTAACTTAGCATTATTTTATCCCACGG
rJMFF043C13- GCAACAACTCTTCACCATAAAGCCGAAACAAAGTTAACTTACCATTATTTTATCCCCCGG
rJMFF018C10- GCAACAACACTTCAGCAGAAAGCCGAAGCAAAGTTAACTTAGCATTATTTTATCCCACGG
rJMFF017O18- GCAACAACACTTCAGCAGAAAGCCGAAGCAAAGTTAACTTAGCATTATTTTATCCCACGG
rJMFF040I21- GCAACAACACTTCAGCAGAAAGCCGAAGCAAAGTTAACTTAGCATTATTATATCCCACGG
JMFN025I10+ GCAACAACACTTCAGCAGAAAGCCGAAGCAAAGTTAACTTAGCATTATTTTATCCCAAGG
rJMFF025D18- GCAACAACACTTCAGCAGAAAGCCGAAGCAAAGTTAACTTAGCATTATTTTATCCCACGG
rJMFF025H16- GCAACAACACTTCAGCAGAAAGCCGAAGCAAAGTTAACTTAGCATTATTTTATCCCACGG
                      ____________________________________________________________
consensus GCAACAACACTTCAGCAGAAAGCCGAAGCAAAGTTAACTTAGCATTATTTTATCCCACGG
 
. : . : . : . : . : . :
rJMFF048I10- AATTAAAGAAAATTGGGCACCTTGATGAGTGTTGTATCACCCGGTGTGATCAGTCTCTGC
rJMFF014F12- AATTAAAGAAATTTGGGCACCTTGATGAGTGTTGTATCACCCGGTGTGATCAGTCTCTGC
rJMFF015K20- AATTAAAGAAATTTGGGCACCTTGATGAGTGTTGTATCACCCGGTGTGATCAGTCTCTGC
rJMFF043C13- AATTAAAGAAATTTGGGCACCTTGATGACCGGTGTATCACCCGGTGTGATCACTCTCTGC
rJMFF018C10- AATTAAAGAAATTTGGGCACCTTGATGAGTGTTGTATCACCCGGTGTGATCAGTCTCTGC
rJMFF017O18- AATTAAAGAAATTTGGGCACCTTGATGAGTGTTGTATCACCCGGTGTGATCAGTCTCTGC
rJMFF040I21- AATTAAAGAAATTTGGGCACCTTGATGAGTGTTGTATCACCCGGTGTGATCAGTCTCTGC
JMFN025I10+ AATTAAAGAAATTTGGGCACCTTGATGAGTGTTGTATCACCCGGTGTGATCAGTCTCTGC
rJMFF025D18- AATTAAAGAAATTTGGGCACCTTGATGAGTGTTGTATCACCCGGTGTGATCAGTCTCTGC
rJMFF025H16- AATTAAAGAAATTTGGGCACCTTGATGAGTGTTGTATCACCCGGTGTGATCAGTCTCTGC
                      ____________________________________________________________
consensus AATTAAAGAAATTTGGGCACCTTGATGAGTGTTGTATCACCCGGTGTGATCAGTCTCTGC
 
. : . : . : . : . : . :
rJMFF048I10- TTGC
rJMFF014F12- TTGCAGGCAATGGGGTAAATTGTTGGTAAACCTCACATGCATATTTCCAGTTCACAACTT
rJMFF015K20- TTGCAGGCAATGGGGTAAATTGTTGGTAAACCTCACATGCATATTTCCAGTTCACAACTT
rJMFF043C13- TTGCAGGCAATGGGGTAAATTGTTGGTAAACCTCACATGCATATTTCCAGATCACAACTT
rJMFF018C10- TTGCAGGCAATGGGGTAAATTGTTGGTAAACCTCACATGCATATTTCCAGTTCACAACTT
rJMFF017O18- TTGCAGGCAATGGGGTAAATTGTTGGTAAACCTCACATGCATATTTCCAGTTCACAACTT
rJMFF040I21- TTGCAGGCAATGGGGTAAATTGTTGGTAAACCTCACATGCATATTTCCAGTTCACAACTT
JMFN025I10+ TTGCAGGCAATGGGGTAAATTGTTGGTAAACCTCACATGCATATTTCCAGTTCACAACTT
rJMFF025D18- TTGCAGGCAATGGGGTAAATTGTTGGTAAACCTCACATGCATATTTCCAGTTCACAACTT
rJMFF025H16- TTGCAGGCAATGGGGTAAATTGTTGGTAAACCTCACATGCATATTTCCAGTTCACAACTT
JMFN029B19+ CAACTT
                      ____________________________________________________________
consensus TTGCAGGCAATGGGGTAAATTGTTGGTAAACCTCACATGCATATTTCCAGTTCACAACTT
 
. : . : . : . : . : . :
rJMFF014F12- TCCATATATTCTTCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGTATGCATGTT
rJMFF015K20- TCCATATATTCTTCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGTATGCATGTT
rJMFF043C13- TCCATATATTCTTCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGAATGCATGGT
rJMFF018C10- TCCATATATTCTTCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGTATGCATGTT
rJMFF017O18- TCCATATATTCTTCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGTATGCATGTT
rJMFF040I21- TCCATATATTCTTCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGTATGCATGTT
JMFN025I10+ TCCATATATTCTTCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGTATGCATGTT
rJMFF025D18- TCCATATATTCTTCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGTATGCATGTT
rJMFF025H16- TCCATATATTCTTCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGTATGCATGTT
JMFN008A20+ TCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGTATGCATGTT
JMFN029B19+ TCCATATATTCTTCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGTATGCATGTT
                      ____________________________________________________________
consensus TCCATATATTCTTCAAGTAATCCGGCCTCACATTCTTGTACTGTAAGTAGTATGCATGTT
 
. : . : . : . : . : . :
rJMFF014F12- CCCAAACATCTATGCCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
rJMFF015K20- CCCAAACATCTATGCCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
rJMFF043C13- CCCAAACATCTATGCCCAAAAAAGGAACCAAGTTTGGATTTACCGTAACCAAAGGGACCT
rJMFF018C10- CCCAAACATCTATGCCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
rJMFF017O18- CCCAAACATCTATGCCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
rJMFF040I21- CCCAAACATCTATGCCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
JMFN025I10+ CCCAAACATCTATGCCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
rJMFF025D18- CCCAAACATCTATGCCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
rJMFF025H16- CCCAAACATCTATGCCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
JMFN008A20+ CCCAAACATCTATGCCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
JMFN029B19+ CCCAAACATCTATGCCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
JMFF015K20+ CCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
JMFF050D02+ TTGGATTTACAGTANCCAAAGGGTCCT
JMFF043C13+ CAGTAACCAAAGGGTCCT
                      ____________________________________________________________
consensus CCCAAACATCTATGCCCAGTAGAGGAACCAAGTTTGGATTTACAGTAACCAAAGGGTCCT
 
. : . : . : . : . : . :
rJMFF014F12- GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
rJMFF015K20- GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
rJMFF043C13- GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGGCCAAACCCAACCACACCC
rJMFF018C10- GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
rJMFF017O18- GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
rJMFF040I21- GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
JMFN025I10+ GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
rJMFF025D18- GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
rJMFF025H16- GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
JMFN008A20+ GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
JMFN029B19+ GATTCGTAGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
JMFF015K20+ GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
JMFF050D02+ GATTT-GGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
JMFF025D18+ CCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
JMFF025H16+ ACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
JMFF014F12+ TGTCCAAACCCAGCCACACCC
JMFF017O18+ TCAGCTCTTTGTCCAAACCCAGCCACACCC
JMFF043C13+ GATTT-GGGGTGGTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
JMFF018C10+ GTCCAAACCCAGCCACACCC
JMFF047L16+ TTGTCCAAACGCAGCCACACCC
                      ____________________________________________________________
consensus GATTTGGGGTGGTTTGAACCACAAGATGCTTCAGCTCTTTGTCCAAACCCAGCCACACCC
 
. : . : . : . : . : . :
rJMFF014F12- AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
rJMFF015K20- AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
rJMFF043C13- AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATGAGAGCATCTAAAG
rJMFF018C10- AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
rJMFF017O18- AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
rJMFF040I21- AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFN025I10+ AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
rJMFF025D18- AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
rJMFF025H16- AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFN008A20+ AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFN029B19+ AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFF015K20+ AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFF050D02+ AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFF025D18+ AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFF025H16+ AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFF014F12+ AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFF017O18+ AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFF043C13+ AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFF040I21+ TACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFF018C10+ AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
JMFF047L16+ AGCCAGAACCTNGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
                      ____________________________________________________________
consensus AGCCAGAACCTTGTACAGCAGCACCTTCTGCAGACATCTTTTGTATCAGAGCATCTAAAG
 
. : . : . : . : . : . :
rJMFF014F12- AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
rJMFF015K20- AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
rJMFF043C13- AGCC
rJMFF018C10- AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
rJMFF017O18- AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
rJMFF040I21- AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFN025I10+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
rJMFF025D18- AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
rJMFF025H16- AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFN008A20+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFN029B19+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFF015K20+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFF050D02+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFF025D18+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFF025H16+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFF014F12+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFF017O18+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFF043C13+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFF040I21+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFF048I10+ CTCCTT
JMFF018C10+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
JMFF047L16+ AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
                      ____________________________________________________________
consensus AGCCAAAGTGATTGTCAATCTCCCAGCCCAAAGAACTCTTCGGAGGCTCGCCACCTCCTT
 
. : . : . : . : . : . :
rJMFF014F12- CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
rJMFF015K20- CCCGAATA-GGGGCAAGGTTCTTCCAGAAAAATTGAGTGGTTTATATGGCCTCCG-CCGT
rJMFF018C10- CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
rJMFF017O18- CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTT--TATGGCCTCCG-CCGT
rJMFF040I21- CCCGAATAGGGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCGNCCGT
JMFN025I10+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
rJMFF025D18- CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
rJMFF025H16- CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFN008A20+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFN029B19+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFF015K20+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFF050D02+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFF025D18+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFF025H16+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFF014F12+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFF017O18+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTT--TATGGCCTCCG-CCGT
JMFF043C13+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFF040I21+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFF048I10+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFF018C10+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
JMFF047L16+ CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
                      ____________________________________________________________
consensus CCCGAATA-GGGGCAAGGTTCTTCCAG-AAAATTGAGTGGTTTATATGGCCTCCG-CCGT
 
. : . : . : . : . : . :
rJMFF014F12- TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
rJMFF015K20- TGAACTTGATGGGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGAT
rJMFF018C10- TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
rJMFF017O18- TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
rJMFF040I21- TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCG
JMFN025I10+ TGAACTTGAT-GGCGC
rJMFF025D18- TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
rJMFF025H16- TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFN008A20+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFN029B19+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFF015K20+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFF050D02+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFF025D18+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFF025H16+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFF014F12+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFF017O18+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFF043C13+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFF040I21+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFF048I10+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFF018C10+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
JMFF047L16+ TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
                      ____________________________________________________________
consensus TGAACTTGAT-GGCGCTCTGCAATTTGACGGCGGCGGACGCATCGCCCTTGCTGATGGCC
 
. : . : . : . : . : . :
rJMFF014F12- TCGTGGAGCTGCTCGAGAGCCTTGTTGTA
rJMFF018C10- TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACG
rJMFF017O18- TCGTGGAGCTGCTCGAGAGCCTTGTTGTANTTGG
rJMFF025D18- TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGT
rJMFF025H16- TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTANGCCTGGTGATGCTTCTGG
JMFN008A20+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFN029B19+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFF015K20+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFF050D02+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFF025D18+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFF025H16+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFF014F12+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFF017O18+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFF043C13+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFF040I21+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFF048I10+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFF018C10+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
JMFF047L16+ TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
                      ____________________________________________________________
consensus TCGTGGAGCTGCTCGAGAGCCTTGTTGTAGTTGGTGACGTAGGCCTGGTGATGCTTCTGG
 
. : . : . : . : . : . :
rJMFF025H16- TGATGAAGCTGCATGATCTCTCCGCTAATGGC
JMFN008A20+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
JMFN029B19+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
JMFF015K20+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
JMFF050D02+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
JMFF025D18+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
JMFF025H16+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
JMFF014F12+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
JMFF017O18+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTAATAGGAA
JMFF043C13+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
JMFF040I21+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
JMFF048I10+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
JMFF018C10+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
JMFF047L16+ TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
                      ____________________________________________________________
consensus TGATGAAGCTGCATGATCTCTCCGCTAATGGCGGGCTCCAGGGCGCCGTAGTCATAGGAA
 
. : . : . : . : . : . :
JMFN008A20+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFN029B19+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFF015K20+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFF050D02+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFF025D18+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFF025H16+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFF014F12+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFF017O18+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFF043C13+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFF040I21+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFF048I10+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFF018C10+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
JMFF047L16+ AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
                      ____________________________________________________________
consensus AGATCAGGAAGCGTGGCGGTCTGCAAGCTGCGCAGCTGCTGCCGGAACGCTTGCGCGGTG
 
. : . : . : . : . : . :
JMFN008A20+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTG
JMFN029B19+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGC
JMFF015K20+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTAT
JMFF050D02+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTATACTCTTCCTT
JMFF025D18+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTATACTCTTCCTT
JMFF025H16+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTATACTCTTCCTT
JMFF014F12+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTATACTCTTCCTT
JMFF017O18+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTATACTCTTCCTT
JMFF043C13+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTATACTCTTCCTT
JMFF040I21+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTATACTCTTCCTT
JMFF048I10+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTATACTCTTCCTT
JMFF018C10+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTATACTCTTCCTT
JMFF047L16+ GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTATACTCTTCCTT
                      ____________________________________________________________
consensus GCGGAAAGGGATTTTCGGGTGGCTAGGTTTCGAAGTGCCATTGCCGGTATACTCTTCCTT
 
. : . : . : . : . : . :
JMFF050D02+ CTTCTTCGAGATTCTGTTAGTATATATCGAGCAGTCGAGAAAGTGAGAGACGGCAAAAC
JMFF025D18+ CTTCTTCGAGATTCTGTTAGTATATATCGAGCAGTCGAGAAAGTGAGAGACGGCAAAAC
JMFF025H16+ CTTCTTCGAGATTCTGTTAGTATATATCGAGCAGTCGAGAAAGTGAGAGACGGCAAAAC
JMFF014F12+ CTTCTTCGAGATTCTGTTAGTATATATCGAGCAGTCGAGAAAGTGAGAGACGGCAAAAC
JMFF017O18+ CTTCTTCGAGATTCTGTTAGTATATATCGAGCAGTCGAGAAAGTGAGAGACGGCAAAAC
JMFF043C13+ CTTCTTCGAGATTCTGTTAGTATATATCGAGCAGTCGAGAAAGTGAGAGACGGCAAAAC
JMFF040I21+ CTTCTTCGAGATTCTGTTAGTATATATCGAGCAGTCGAGAAAGTGAGAGACGGCAAAAC
JMFF048I10+ CTTCTTCGAGATTCTGTTAGTATATATCGAGCAGTCGAGAAAGTGAGAGACGGCAAAAC
JMFF018C10+ CTTCTTCGAGATTCTGTTAGTATATATCGAGCAGTCGAGAAAGTGAGAGACGGCAAAAC
JMFF047L16+ CTTCTTCGAGATTCTGTTAGTATATATCGAGCAGTCGAGAAAGTGAGAGACGGCAAAACC
                      ____________________________________________________________
consensus CTTCTTCGAGATTCTGTTAGTATATATCGAGCAGTCGAGAAAGTGAGAGACGGCAAAACC