Contig 011630:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046C02Sequence607011630 (3)ref|XP_009780405.1|2e-33PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris]446011630 (3)ref|XP_007206102.1|5e-12hypothetical protein PRUPE_ppa012971mg [Prunus persica] gb|EMJ07301.1| hypotheti
JMFN013M03Sequence618011630 (3)ref|XP_009780405.1|2e-33PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF046C02- CCTTATGGCGGATCACCCTGGA
                      ____________________________________________________________
consensus CCTTATGGCGGATCACCCTGGA
 
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rJMFF046C02- GAGTTTTTTTTTTTTTTTTATTTTTTTTTTTTCATCCTTCAATTCTGGAAAATAATATGC
                      ____________________________________________________________
consensus GAGTTTTTTTTTTTTTTTTATTTTTTTTTTTTCATCCTTCAATTCTGGAAAATAATATGC
 
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rJMFF046C02- CTTCTTCTCCCCATGGAAAAATGCAAGAATTTACATTGCTAATCTCTATTGCTCTGTATT
                      ____________________________________________________________
consensus CTTCTTCTCCCCATGGAAAAATGCAAGAATTTACATTGCTAATCTCTATTGCTCTGTATT
 
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rJMFF046C02- TCTGTAAAAAATGCAAGAATTTACATTGCCAATCTCTATTGCGCTGTATTTCTGTAATAA
JMFN013M03+ ACATTGCCAATCTCTATTGCGCTGTATTTCTGTAATAA
JMFF046C02+ GTAATAA
                      ____________________________________________________________
consensus TCTGTAAAAAATGCAAGAATTTACATTGCCAATCTCTATTGCGCTGTATTTCTGTAATAA
 
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rJMFF046C02- TGTACATTGCTAAAATGAGCACAAGAAAAAAAGTAAGTTAACAACCCAAAACAAACTACC
JMFN013M03+ TGTACATTGCTAAAATGAGCACAAGAAAAAAAGTAAGTTAACAACCCAAAACAAACTACC
JMFF046C02+ TGTACATTGCTAAAATGAGCACAAGAAAAAAAGTAAGTTAACAACCCAAAACAAACTACC
                      ____________________________________________________________
consensus TGTACATTGCTAAAATGAGCACAAGAAAAAAAGTAAGTTAACAACCCAAAACAAACTACC
 
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rJMFF046C02- AACACTGATCGGTTTCCCACCTTCGGGTCGGGTGGGTCCCCGTAGTACAAGCGTGAATCC
JMFN013M03+ AACACTGATCGGTTTCCCACCTTCGGGTCGGGTGGGTCCCCGTAGTACAAGCGTGAATCC
JMFF046C02+ AACACTGATCGGTTTCCCACCTTCGGGTCGGGTGGGTCCCCGTAGTACAAGCGTGAATCC
                      ____________________________________________________________
consensus AACACTGATCGGTTTCCCACCTTCGGGTCGGGTGGGTCCCCGTAGTACAAGCGTGAATCC
 
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rJMFF046C02- CATTCCAATTATTCCGAGCCCGGCCGTTGGCGCCAACGCTCAATTCCAGGTCGTACAGCG
JMFN013M03+ CATTACAATTATTCCGAGCCCGGCCGTTGGCGCCAACGCTCAATTCCAGGTCGTACAGCG
JMFF046C02+ CATTCCAATTATTCCGAGCCCGGCCGTTGGCGCCAACGCTCAATTCCAGGTCGTACAGCG
                      ____________________________________________________________
consensus CATTCCAATTATTCCGAGCCCGGCCGTTGGCGCCAACGCTCAATTCCAGGTCGTACAGCG
 
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rJMFF046C02- ATCTGGCAGTCGGATCGGAGAGCGTGGCGTAGGCATGATGAATCTCGAGGAAAAGCCGCC
JMFN013M03+ ATCTGGCAGTCGGATCGGAGAGCGTGGCGTAGGCATGATGAATCTCGAGGAAAAGCCGCC
JMFF046C02+ ATCTGGCAGTCGGATCGGAGAGCGTGGCGTAGGCATGATGAATCTCGAGGAAAAGCCGCC
                      ____________________________________________________________
consensus ATCTGGCAGTCGGATCGGAGAGCGTGGCGTAGGCATGATGAATCTCGAGGAAAAGCCGCC
 
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rJMFF046C02- CGTC
JMFN013M03+ CGTCCGATGACGATTCCTGGAGACGGGCGGCGGCGGAGGCGACGGCGTCAGGGTGATAAA
JMFF046C02+ CGTCCGATGACGATTCCTGGAGACGGGCGGCGGCGGAGGCGACGGCGTCAGGGTGATAAA
                      ____________________________________________________________
consensus CGTCCGATGACGATTCCTGGAGACGGGCGGCGGCGGAGGCGACGGCGTCAGGGTGATAAA
 
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JMFN013M03+ TCTTCGCTAACGTACGGTACGCCGTCTTGATCTCCCGCGACGAAGCGCCCTTGTTCACTC
JMFF046C02+ TCTTCGCTAACGTACGGTACGCCGTCTTGATCTCCCGCGACGAAGCGCCCTTGTTCACTC
                      ____________________________________________________________
consensus TCTTCGCTAACGTACGGTACGCCGTCTTGATCTCCCGCGACGAAGCGCCCTTGTTCACTC
 
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JMFN013M03+ TTAGCACATCGTAGAGGCTCATCTCTATCGCCGGAGCCGGTGCTGCCTCGGCCGTCACGC
JMFF046C02+ TTAGCACATCGTAGAGGCTCATCTCTATCGCCGGAGCCGGTGCTGCCTCGGCCGTCACGC
                      ____________________________________________________________
consensus TTAGCACATCGTAGAGGCTCATCTCTATCGCCGGAGCCGGTGCTGCCTCGGCCGTCACGC
 
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JMFN013M03+ AGCGCGCCGACAGTCTCCGTATGTTTGCTCCGGAGATTAACGGCTTGCCGACCGATCCGA
JMFF046C02+ AGCGCGCCGACAGTCTCCGTATGTTTGCTCCGGAGATTAACGGCTTGCCGACCGATCCGA
                      ____________________________________________________________
consensus AGCGCGCCGACAGTCTCCGTATGTTTGCTCCGGAGATTAACGGCTTGCCGACCGATCCGA
 
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JMFN013M03+ GTGCTCCGGCGACAACGGATGACTTTCCAGGCGAGAAATTAAAGGAGTTTGAAGGCGAAA
JMFF046C02+ GTGCTCCGGCGACAACGGATGACTTTCCAGGCGAGAAATTAAAGGAGTTTGAAGGCGAAA
                      ____________________________________________________________
consensus GTGCTCCGGCGACAACGGATGACTTTCCAGGCGAGAAATTAAAGGAGTTTGAAGGCGAAA
 
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JMFN013M03+ AGGTAAGCGTTTGGAGCATTTGGGAAAATGCAAAGATTTC
JMFF046C02+ AGGTAAGCGTTTGGAGCATTTGGGAAAATGCAAAGATTTCTGCGTTGAAGAAAAGAAGGT
                      ____________________________________________________________
consensus AGGTAAGCGTTTGGAGCATTTGGGAAAATGCAAAGATTTCTGCGTTGAAGAAAAGAAGGT