| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015K16 | Sequence | 573 | 011622 (6) | ref|XP_011075044.1| | 4e-105 | PREDICTED: glutamate dehydrogenase B [Sesamum indicum] | 550 | 011622 (6) | ref|XP_007030721.1| | 2e-87 | Glutamate dehydrogenase 1 isoform 1 [Theobroma cacao] ref|XP_007030722.1| Glutam |
| JMFF044K08 | Sequence | 636 | 011622 (6) | ref|XP_011075044.1| | 4e-110 | PREDICTED: glutamate dehydrogenase B [Sesamum indicum] | 546 | 011622 (6) | ref|XP_009800300.1| | 2e-67 | PREDICTED: glutamate dehydrogenase B-like [Nicotiana sylvestris] ref|XP_00980030 |
| JMSF046J06 | Sequence | 786 | 011622 (6) | gb|KDP39703.1| | 1e-177 | hypothetical protein JCGZ_02723 [Jatropha curcas] | 828 | 011622 (6) | gb|KDP39703.1| | 2e-144 | hypothetical protein JCGZ_02723 [Jatropha curcas] |
This contig is upended
. : . : . : . : . : . :
rJMFF044K08- CTTTTTTTTTTTTTTTTTAGAAATCCAGGGGAATATATAACTCA
____________________________________________________________
consensus CTTTTTTTTTTTTTTTTTAGAAATCCAGGGGAATATATAACTCA
. : . : . : . : . : . :
rJMFF044K08- TAACAAGAAAAGAAACATGTTACATTGTCAAACACACAAAAAAAAGAGGCATTTGCCAGA
rJMSF046J06- GTCAAACACACAAAAAAAAGAGGCATTTGCCAGA
____________________________________________________________
consensus TAACAAGAAAAGAAACATGTTACATTGTCAAACACACAAAAAAAAGAGGCATTTGCCAGA
. : . : . : . : . : . :
rJMFF044K08- ACTCTATTGCAGAGTTTGGAATGAATTAAAATTGGATAGAGGGTGAGGGGATTCGGGATT
rJMSF046J06- ACTCTATTGCAGAGTTTGGAATGAATTAGAATTGGATAGAGGGTGAGGGGATTCGGGATT
____________________________________________________________
consensus ACTCTATTGCAGAGTTTGGAATGAATTAGAATTGGATAGAGGGTGAGGGGATTCGGGATT
. : . : . : . : . : . :
rJMFF044K08- CTTGGAGCCTTCCTTTATTCAAGAAAAAAGCGGTGATTATGCATTTATGCATCCGGTTTT
rJMSF046J06- CTTGGAGCCTTCCTTTATTCAAGAAAAAAGCGGTGATTATGCATTTATGCATCCGGTTTT
____________________________________________________________
consensus CTTGGAGCCTTCCTTTATTCAAGAAAAAAGCGGTGATTATGCATTTATGCATCCGGTTTT
. : . : . : . : . : . :
rJMFF044K08- CAAGCTTCCCATCCCCTCAAAAGTGTTGCCCTGGCAACCCGATTAACGCCTAGCGTGAAA
rJMFF015K16- CCCATCCCCTAAGAAGTGTAGCCCGGGCTACACGGTTAACTCCTAAGGTGAAT
rJMSF046J06- CAAGCTTCCCATCCCCTCAGAAGTGTTGCCCTGGCAACCCGATTAACGCCTAGCGTGAAA
____________________________________________________________
consensus CAAGCTTCCCATCCCCTCAGAAGTGTTGCCCTGGCAACCCGATTAACGCCTAGCGTGAAA
. : . : . : . : . : . :
rJMFF044K08- GCGCCCATACGGAGGTCACAGTTGTGGGTTTTGCACATATCCTTCACGTCCTTGAAACCT
rJMFF015K16- GCACCCATACGAAGATCACAGTTGTGGGTGCTGCACATATCCTTCACATCTTTAAAACCT
rJMSF046J06- GCGCCCATACGGAGGTCACAGTTGTGGGTTTTGCACATATCCTTCACGTCCTTGAAACCT
____________________________________________________________
consensus GCGCCCATACGGAGGTCACAGTTGTGGGTTTTGCACATATCCTTCACGTCCTTGAAACCT
. : . : . : . : . : . :
rJMFF044K08- CTGGTCATATATGTCTTCAGTTCGGCATTCACTTTCTCCTCGTCCCACATAAAGCCTTGA
rJMFF015K16- CTGGTCATATATTTATGAAGTTCTGCATTCACTTTCTCCTCATCCCACATAAACCCTTGA
rJMSF046J06- CTGGTCATATATGTCTTCAGTTCGGCATTCACTTTCTCCTCGTCCCACATAAAGCCTTGA
____________________________________________________________
consensus CTGGTCATATATGTCTTCAGTTCGGCATTCACTTTCTCCTCGTCCCACATAAAGCCTTGA
. : . : . : . : . : . :
rJMFF044K08- ATGTTCTGAACCCATTCGAAATAACTGACAGTGACTCCACCTGAATTTGCATATATGTCT
rJMFF015K16- ATGTTCTGAACCCACTCAAAATAGCTGACAGTAACTCCACCTGAGTTTGCATAGATGTCT
rJMSF046J06- ATGTTCTGAACCCATTCGAAATAACTGACAGTGACTCCACCTGAATTTGCATATATGTCT
____________________________________________________________
consensus ATGTTCTGAACCCATTCGAAATAACTGACAGTGACTCCACCTGAATTTGCATATATGTCT
. : . : . : . : . : . :
rJMFF044K08- GGCAGAATGACAACTCCTTTCTTCGCTAAAATCTCATCCGCTTCGGGATCAGTTGGATGA
rJMFF015K16- GGTAGAATCACAACTCCTTTCTTTGCTAAAATCTCATCAGCTTCAGGATCAGTTGGATGG
rJMSF046J06- GGCAGAATGACAACTCCTTTCTTCGCTAAAATCTCATCCGCTTCGGGATCAGTTGGATGA
____________________________________________________________
consensus GGCAGAATGACAACTCCTTTCTTCGCTAAAATCTCATCCGCTTCGGGATCAGTTGGATGA
. : . : . : . : . : . :
rJMFF044K08- TTAGCTGCCTCAATGATGAACT
rJMFF015K16- TTAGCGGCCTCAACAATGAATTTCGCTTTGATGTCATTTGCATTATCCCTGTTAATGACN
rJMSF046J06- TTAGCTGCCTCAATGATGAACTTGGCTTTGATGTCTTTTGCATTATCCCTGTTAATCACG
____________________________________________________________
consensus TTAGCTGCCTCAATGATGAACTTGGCTTTGATGTCTTTTGCATTATCCCTGTTAATGACG
. : . : . : . : . : . :
rJMFF015K16- CCTCCCAGGGCAGCTGG
rJMSF046J06- CCTCCTAAGGCAGCTGGGATGAGGATGTCACAATCTTCAACCAATATCGAATTAGAATCT
____________________________________________________________
consensus CCTCCTAGGGCAGCTGGGATGAGGATGTCACAATCTTCAACCAATATCGAATTAGAATCT
. : . : . : . : . : . :
rJMSF046J06- ATAGCAACTCCATCGTGGAAACCTTTGACTCCACGGTTCTCCTTCACGTGTTTCATCAGG
JMSF046J06+ TTCACGTGTTTCATCAGG
____________________________________________________________
consensus ATAGCAACTCCATCGTGGAAACCTTTGACTCCACGGTTCTCCTTCACGTGTTTCATCAGG
. : . : . : . : . : . :
rJMSF046J06- CTTGGTATGTCAATCCCATTTTCGTTCTTTATGGCACCCGTGACATCACTAACAGCAACA
JMSF046J06+ CTTGGTATGTCAATCCCATTTTCGTTCTTTATGGCACCCGTGACATCACTAACAGCAACA
____________________________________________________________
consensus CTTGGTATGTCAATCCCATTTTCGTTCTTTATGGCACCCGTGACATCACTAACAGCAACA
. : . : . : . : . : . :
rJMSF046J06- ATCTTTCCACCTTGTTCGCTGATCAGTTGAGCCGCCCACGAGCCAACATTACCAAATCCC
JMSF046J06+ ATCTTTCCACCTTGTTCGCTGATCAGTTGAGCCGCCCACGAGCCAACATTACCAAATCCC
____________________________________________________________
consensus ATCTTTCCACCTTGTTCGCTGATCAGTTGAGCCGCCCACGAGCCAACATTACCAAATCCC
. : . : . : . : . : . :
rJMSF046J06- TGTATAACAAAGCGTTGCCCGGCAATGCTCTTGCCATGCTCGTTGAGCAGGGCTTCTGTT
JMSF046J06+ TGTATAACAAAGCGTTGCCCGGCAATGCTCTTGCCATGCTCGTTGAGCAGGGCTTCTGTT
____________________________________________________________
consensus TGTATAACAAAGCGTTGCCCGGCAATGCTCTTGCCATGCTCGTTGAGCAGGGCTTCTGTT
. : . : . : . : . : . :
rJMSF046J06- GCGAA
JMSF046J06+ GCGAAGAGAACGCCCCTCCCTGTAGCGGCATCCCTACCTAGAGAACCTCCAAGATCAATA
____________________________________________________________
consensus GCGAAGAGAACGCCCCTCCCTGTAGCGGCATCCCTACCTAGAGAACCTCCAAGATCAATA
. : . : . : . : . : . :
JMSF046J06+ GGTTTTCCTGTTACTACTGCAGGTGAATAGCCATGGAACTTTGAGTACTCATCCAGAATC
JMFF015K16+ TGAGTACTCGTCGAGAATC
JMFF044K08+ GAATAGCCATGGAACTNTGAGTACTCATCCAGAATC
____________________________________________________________
consensus GGTTTTCCTGTTACTACTGCAGGTGAATAGCCATGGAACTTTGAGTACTCATCCAGAATC
. : . : . : . : . : . :
JMSF046J06+ CATGCCATTGTCTGTGGACCTGTTCCCATATCAGGAGCTGGGACATCGGTGTGGGTGCCT
JMFF015K16+ CATGCCATTGTCTGCGGACCTGTTCCCATATCAGGAGCCGGGACATCTATCTGGACGCCA
JMFF044K08+ CATGCCATNGTCTGTGGACCTGTTCCCATATCAGGAGCTGGGACATCGGTGTGGGTGCCT
____________________________________________________________
consensus CATGCCATTGTCTGTGGACCTGTTCCCATATCAGGAGCTGGGACATCGGTGTGGGTGCCT
. : . : . : . : . : . :
JMSF046J06+ ATCAAATCATGTATCTTCTGGGTAAAAACTCGAGTGAGTCGTTCCAGTTCAGAGCAGCTC
JMFF015K16+ ATCAGATCATGGATTTTCTGAGTAAAAACGCGAGTAAGTCGTTCCAGCTCAGAGACACTC
JMFF044K08+ ATCAAATCATGTATCTTCTGGGTAAAAACTCGAGTGAGTCGTTCCAGTTCAGAGCAGCTC
____________________________________________________________
consensus ATCAAATCATGTATCTTCTGGGTAAAAACTCGAGTGAGTCGTTCCAGTTCAGAGCAGCTC
. : . : . : . : . : . :
JMSF046J06+ AGCTCGCTCGGATTGCATCCTATCCCGCCCTTGGCTCCGCCATACGGTATGTTGGCTACT
JMFF015K16+ AGCTCGCTTGGATTGCATCCTATCCCTCCTTTAGCCCCACCATATGGTATGTTAGCCACT
JMFF044K08+ AGCTCGCTCGGATTGCATCCTATCCCGCCCTTGGCTCCGCCATACGGTATGTTGGCTACT
____________________________________________________________
consensus AGCTCGCTCGGATTGCATCCTATCCCGCCCTTGGCTCCGCCATACGGTATGTTGGCTACT
. : . : . : . : . : . :
JMSF046J06+ GCTGTCTTCCATGTCATTAGTTGTGCTAAGGCATTCACCTCATCTGGATCAACCTCGGGA
JMFF015K16+ GCTGTTTTCCATGTCATTAGTTGTGCTAATGCATTCACTTCATCCGGATCAACCTCCGGG
JMFF044K08+ GCTGTCTTCCATGTCATTAGTTGTGCTAAGGCATTCACCTCATCTGGATCAACCTCGGGA
____________________________________________________________
consensus GCTGTCTTCCATGTCATTAGTTGTGCTAAGGCATTCACCTCATCTGGATCAACCTCGGGA
. : . : . : . : . : . :
JMSF046J06+ TGGTATCTGATCCCTCCTTTCATAGGACCCCTAGCATTGTCATGCTGAACTCTAAACCCC
JMFF015K16+ TGGTATCTGATTCCACCTTTCATGGGGCCTCTAGCATTATCATGTTGAACTCGAAACCCG
JMFF044K08+ TGGTATCTGATCCCTCCTTTCATAGGACCCCTAGCATTGTCATGCTGAACTCTAAACCCC
____________________________________________________________
consensus TGGTATCTGATCCCTCCTTTCATAGGACCCCTAGCATTGTCATGCTGAACTCTAAACCCC
. : . : . : . : . : . :
JMSF046J06+ ACAAAACTCGCCAATGACCCATCGTCTTTTGGTATCGTACACTCAACCTTGATTTCGCGG
JMFF015K16+ ACAAAGGACACCAAGGAGCCATCATCTTTAGGTATTGTACACTCAACCTTGATTTCGCGA
JMFF044K08+ ACAAAACTCGCCAATGACCCATCGTCTTTTGGTATCGTACACTCAACCTTGATTTCGCGG
____________________________________________________________
consensus ACAAAACTCGCCAATGACCCATCGTCTTTTGGTATCGTACACTCAACCTTGATTTCGCGG
. : . : . : . : . : . :
JMSF046J06+ AATGGTATGAGCAAACTGTTCTCGAGCTTCGAATCCAAACCCAGCAGCCGTGCCGCCAGC
JMFF015K16+ AATGGGATGAGCAAACTCCTCTCGAGTTTTGAATCCAAGCCTAGGAGCCGAGCTGCCAGC
JMFF044K08+ AATGGTATGAGCAAACTGTTCTCGAGCTTCGAATCCAAACCCAGCAGCCGTGCCGCCAGC
____________________________________________________________
consensus AATGGTATGAGCAAACTGTTCTCGAGCTTCGAATCCAAACCCAGCAGCCGTGCCGCCAGC
. : . : . : . : . : . :
JMSF046J06+ TTGAAGTTCCGGTTGGTAGCAGCCAAGGCATTCATG
JMFF015K16+ CTAAAGTTTCTGTTGGTAGCAGCTAAAGCATTCATG
JMFF044K08+ TTGAAGTTCCGGTTGGTAGCAGCCAAGGCATTCATGATCCTGAAACAAGAAGTCAACACA
____________________________________________________________
consensus TTGAAGTTCCGGTTGGTAGCAGCCAAGGCATTCATGATCCTGAAACAAGAAGTCAACACA
. : . : . : . : . : . :
JMFF044K08+ GAAGCAGATGGAGGAAGAAGATGAAAATCAGATGCCCTGGTAAGCAGCTGTCTCTATCCA
____________________________________________________________
consensus GAAGCAGATGGAGGAAGAAGATGAAAATCAGATGCCCTGGTAAGCAGCTGTCTCTATCCA
. : . : . : . : . : . :
JMFF044K08+ TATTTATAGCCCAGAAAATCAAAGTTTAGATAAAGTTTCCAGCAAGGTGCCACAACACTC
____________________________________________________________
consensus TATTTATAGCCCAGAAAATCAAAGTTTAGATAAAGTTTCCAGCAAGGTGCCACAACACTC