Contig 011620:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044H09Sequence580011620 (7)632005517 (7)
JMFN011C11Sequence620011620 (7)
JMFN020E23Sequence414011620 (7)
JMFN032K21Sequence633011620 (7)
JMFN035C11Sequence633011620 (7)
JMFN038D07Sequence613011620 (7)
JMFS158C04Sequence569011620 (7)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN032K21+ TTAAGCATCATACAATCCCATAGAACCTCAAAGAAACACTACAGAAATCCA
JMFN011C11+ CAATCCCATAGAACCTCAAAGAAACACTACAGAAATCCA
JMFN035C11+ AGCATCATACAATCCCATAGAACCTCAAAGAAACACTACAGAAATCCA
JMFN038D07+ CTCAAAGAAACACTACAGAAATCCA
                      ____________________________________________________________
consensus TTAAGCATCATACAATCCCATAGAACCTCAAAGAAACACTACAGAAATCCA
 
. : . : . : . : . : . :
JMFN032K21+ CAGCAAAAGTCTACAAGTCTCACAGTGCATCATGCATCCATGCATCCAAACCTAGGGGCA
JMFN011C11+ CAGCAANAGTCTACAAGTCTCACAGTGCATCATGCATCCATGCATCCAAACCTAGGGGCA
JMFS158C04+ GTCTCACAGTGCATCATGCATCCATGCATCCAAACCTAGGGGCA
JMFN035C11+ CAGCAAAAGTCTACAAGTCTCACAGTGCATCATGCATCCATGCATCCAAACCTAGGGGCA
JMFN038D07+ CAGCAAAAGTCTACAAGTCTCACAGTGCATCATGCATCCATGCATCCAAACCTAGGGGCA
JMFF044H09+ CACAGTGCATCATGCATCCATGCATCCAAACCTAGGGGCA
                      ____________________________________________________________
consensus CAGCAAAAGTCTACAAGTCTCACAGTGCATCATGCATCCATGCATCCAAACCTAGGGGCA
 
. : . : . : . : . : . :
JMFN032K21+ TAAAAGCCTATGTAGATCGTGATAAGTTCACCAAATCGTCCAAAGCTTGTTGTAAGTTGG
JMFN011C11+ TAAAAGCCTATGTAGATCGTGATAAGTTTACCAAATCGTCCAAAGCTTGTTGTAAGTTGG
JMFS158C04+ TAAAAGCCTATGTAGATCGTGATAAGTTCACCAAATCGTCCAAAGCTTGTTGTAAGTTGG
JMFN035C11+ TAAAAGCCTATGTAGATCGTGATAAGTTCACCAAATCGTCCAAAGCTTGTTGTAAGTTGG
JMFN038D07+ TAAAAGCCTATGTAGATCGTGATAAGTTCACCAAATCGTCCAAAGCTTGTTGTAAGTTGG
JMFF044H09+ TAAAAGCCTATGTAGATCGTGATAAGTTCACCAAATCGTCCAAAGCTTGTTGTAAGTTGG
                      ____________________________________________________________
consensus TAAAAGCCTATGTAGATCGTGATAAGTTCACCAAATCGTCCAAAGCTTGTTGTAAGTTGG
 
. : . : . : . : . : . :
JMFN032K21+ CAAGGAAGCCTTTCGCCTCATCGTTTAAGACTTCCAACCGCTTCCCCTCTTTGATGATTT
JMFN011C11+ CAAGGAAGCCTTTCGCCTCATCGTTTAAGACTTCCAACCGCTTCCCCTCTTTGATGATTT
JMFS158C04+ CAAGGAAGCCTTTCGCCTCATCGTTTAAGACTTCCAACCGCTTCCCCTCTTTGATGATTT
JMFN020E23+ CTTCCAACCGCTTCCCCTGTTTGATGATTT
JMFN035C11+ CAAGGAAGCCTTTCGCCTCATCGTTTAAGACTTCCAACCGCTTCCCCTCTTTGATGATTT
JMFN038D07+ CAAGGAAGCCTTTCGCCTCATCGTTTAAGACTTCCAACCGCTTCCCCTCTTTGATGATTT
JMFF044H09+ CAAGGAAGCCTTTCGCCTCATCGTTTAAGACTTCCAACCGCTTCCCCTCTTTGATGATTT
                      ____________________________________________________________
consensus CAAGGAAGCCTTTCGCCTCATCGTTTAAGACTTCCAACCGCTTCCCCTCTTTGATGATTT
 
. : . : . : . : . : . :
JMFN032K21+ TATCGATTTCCTGGTTGACAATTTCCAATTTAGTATTAAGCGCAGTTATCTCATCCCGAT
JMFN011C11+ TATCGATTTCCTGGTTGACAATTTCCAATTTAGTATTAAGCGCAGTTATCTCATCCCGAT
JMFS158C04+ TATCGATTTCCTGGTTGACAATTTCCAATTTAGTATTAAGCGCAGTTATCTCATCCCGAT
JMFN020E23+ TATCGATTTCCTGGTTGGCAATTTCCAATTTAGTATTAAGCGCAGTTATCTCATCCCGAT
JMFN035C11+ TATCGATTTCCTGGTTGACAATTTCCAATTTAGTATTAAGCGCAGTTATCTCATCCCGAT
JMFN038D07+ TATCGATTTCCTGGTTGACAATTTCCAATTTAGTATTAAGCGCAGTTATCTCATCCCGAT
JMFF044H09+ TATCGATTTCCTGGTTGACAATTTCCAATTTAGTATTAAGCGCAGTTATCTCATCCCGAT
                      ____________________________________________________________
consensus TATCGATTTCCTGGTTGACAATTTCCAATTTAGTATTAAGCGCAGTTATCTCATCCCGAT
 
. : . : . : . : . : . :
JMFN032K21+ TGCTTTTTATTTCGCAGTACTTTCTGGCTATTGTCAACGCCCTTTCAACATGCAGCTGAA
JMFN011C11+ TGCTTTTTATTTCGCAGTACTTTCTGGCTATTGTCAACGCCCTTTCAACATGCAGCTGAA
JMFS158C04+ TGCTTTTTATTTCGCAGTACTTTCTGGCTATTGTCAACGCCCTTTCAACATGCAGCTGAA
JMFN020E23+ TGCTTTTTATTTCGCAGTACTTTCTGGCTATTGTCAACGCCCTTTCAACATGCAGCTGAA
JMFN035C11+ TGCTTTTTATTTCGCAGTACTTTCTGGCTATTGTCAACGCCCTTTCAACATGCAGCTGAA
JMFN038D07+ TGCTTTTTATTTCGCAGTACTTTCTGGCTATTGTCAACGCCCTTTCAACATGCAGCTGAA
JMFF044H09+ TGCTTTTTATTTCGCAGTACTTTCTGGCTATTGTCAACGCCCTTTCAACATGCAGCTGAA
                      ____________________________________________________________
consensus TGCTTTTTATTTCGCAGTACTTTCTGGCTATTGTCAACGCCCTTTCAACATGCAGCTGAA
 
. : . : . : . : . : . :
JMFN032K21+ GTGGCATCTCTAACTCGGCCAAAACGCCGCGGTGCTCCTCAAGTAAAGCAGTAAGTTGTC
JMFN011C11+ GTGGCATCTCTAACTCGGCCAAAACGCCGCGGTGCTCCTCAAGTAAAGCAGTAAGTTGTC
JMFS158C04+ GTGGCATCTCTAACTCGGCCAAAACGCCGCGGTGCTCCTCAAGTAAAGCAGTAAGTTGTC
JMFN020E23+ GTGGCATCTCTAACTCGGCCAAAACGCCGCGGTGCTCCTCAAGTAAAGCAGTAAGTTGTC
JMFN035C11+ GTGGCATCTCTAACTCGGCCAAAACGCCGCGGTGCTCCTCAAGTAAAGCAGTAAGTTGTC
JMFN038D07+ GTGGCATCTCTAACTCGGCCAAAACGCCGCGGTGCTCCTCAAGTAAAGCAGTAAGTTGTC
JMFF044H09+ GTGGCATCTCTAACTCGGCCAAAACGCCGCGGTGCTCCTCAAGTAAAGCAGTAAGTTGTC
                      ____________________________________________________________
consensus GTGGCATCTCTAACTCGGCCAAAACGCCGCGGTGCTCCTCAAGTAAAGCAGTAAGTTGTC
 
. : . : . : . : . : . :
JMFN032K21+ TTTCTTGTTCCTTTATCATACGTCCCAGATCATTAAGACTGCAGCCAGATAGCTCCTCAT
JMFN011C11+ TTTCTTGTTCCTTTATCATACGTCCCAGATCATTAAGACTGCAGCCAGATAGCTCCTCAT
JMFS158C04+ TTTCTTGTTCCTTTATCATACGTCCCAGATCATTAAGACTGCAGCCAGATAGCTCCTCAT
JMFN020E23+ TTTCTTGTTCCTTTATCATACGTCCCAGATCATTAAGACTGCAGCCAGATAGCTCCTCAT
JMFN035C11+ TTTCTTGTTCCTTTATCATACGTCCCAGATCATTAAGACTGCAGCCAGATAGCTCCTCAT
JMFN038D07+ TTTCTTGTTCCTTTATCATACGTCCCAGATCATTAAGACTGCAGCCAGATAGCTCCTCAT
JMFF044H09+ TTTCTTGTTCCTTTATCATACGTCCCAGATCATTAAGACTGCAGCCAGATAGCTCCTCAT
                      ____________________________________________________________
consensus TTTCTTGTTCCTTTATCATACGTCCCAGATCATTAAGACTGCAGCCAGATAGCTCCTCAT
 
. : . : . : . : . : . :
JMFN032K21+ TTTGCTTACGTAGATCCATTAAAAAGCCCTGAGTCTTAATGGTCTGTTGAATGTTGATGT
JMFN011C11+ TTTGCTTACGTAGATCCATTAAAAAGCCCTGAGTCTTAATGGTCTGTTGAATGTTGATGT
JMFS158C04+ TTTGCTTACGTAGATCCATTAAAAAGCCCTGAGTCTTAATGGTCTGTTGAATGTTGATGT
JMFN020E23+ TTTGCTTACGTAGATCCATTAAAAAGCCCTGAGTCTTAATGGTCTGTTGAATGTTGATGT
JMFN035C11+ TTTGCTTACGTAGATCCATTAAAAAGCCCTGAGTCTTAATGGTCTGTTGAATGTTGATGT
JMFN038D07+ TTTGCTTACGTAGATCCATTAAAAAGCCCTGAGTCTTAATGGTCTGTTGAATGTTGATGT
JMFF044H09+ TTTGCTTACGTAGATCCATTAAAAAGCCCTGAGTCTTAATGGTCTGTTGAATGTTGATGT
                      ____________________________________________________________
consensus TTTGCTTACGTAGATCCATTAAAAAGCCCTGAGTCTTAATGGTCTGTTGAATGTTGATGT
 
. : . : . : . : . : . :
JMFN032K21+ TGACGCGAGTTGTTGCTGGAGAAGAACCTGAGAGTGCCGGAGAGGAACCTGAGAATGAGT
JMFN011C11+ TGACGCGAGTTGTTGCTGGAGAAGAACCTGAGAGTGCCGGAGAGGAACCTGAGAATGAGT
JMFS158C04+ TGACGCGAGTTGTTGCTGGAGAAGAACCTGAGAGTGCCGGAGAGGAACCTGAGAATGAGT
JMFN020E23+ TGACGCGAGTTGTTGCTGGAGAAGAACCTGAGAGTGCCGGAGAGGAACCTGAGAATGAGT
JMFN035C11+ TGACGCGAGTTGTTGCTGGAGAAGAACCTGAGAGTGCCGGAGAGGAACCTGAGAATGAGT
JMFN038D07+ TGACGCGAGTTGTTGCTGGAGAAGAACCTGAGAGTGCCGGAGAGGAACCTGAGAATGAGT
JMFF044H09+ TGACGCGAGTTGTTGCTGGAGAAGAACCTGAGAGTGCCGGAGAGGAACCTGAGAATGAGT
                      ____________________________________________________________
consensus TGACGCGAGTTGTTGCTGGAGAAGAACCTGAGAGTGCCGGAGAGGAACCTGAGAATGAGT
 
. : . : . : . : . : . :
JMFN032K21+ TGTTGTTGGGAAGAGCTGTCGAGAGTGAGTTGTTGGGACTTG
JMFN011C11+ TGTTGTTGGGAAGAGC
JMFS158C04+ TGTTGTTGGGAAGA
JMFN020E23+ TGTTGTTGGGAAGAGCTGTCGAGA
JMFN035C11+ TGTTGTTGGGAAGAGCTGTCGAGAGTGAGTTGTTGGGACTTGGGA
JMFN038D07+ TGTTGTTGGGAAGAGCTGTCGAGAGTGAGTTGTTGGGACTTGGGAGGA
JMFF044H09+ TGTTGTTGGGAAGAGCTGTCGAGAGTGAGTTGTTGGGACTTGGGAGGAGTGGAGAGTGGA
                      ____________________________________________________________
consensus TGTTGTTGGGAAGAGCTGTCGAGAGTGAGTTGTTGGGACTTGGGAGGAGTGGAGAGTGGA