| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006F12 | Sequence | 491 | 011618 (8) | dbj|BAO57286.1| | 2e-58 | V-type proton ATPase subunit [Ipomoea nil] | 741 | 002723 (7) | dbj|BAO57286.1| | 7e-94 | V-type proton ATPase subunit [Ipomoea nil] |
| JMFF032N08 | Sequence | 492 | 011618 (8) | dbj|BAO57286.1| | 6e-62 | V-type proton ATPase subunit [Ipomoea nil] | 672 | 004146 (5) | ref|XP_009602194.1| | 2e-70 | PREDICTED: small G protein signaling modulator 2-like [Nicotiana tomentosiformi |
| JMFF032N24 | Sequence | 614 | 011618 (8) | dbj|BAO57286.1| | 2e-101 | V-type proton ATPase subunit [Ipomoea nil] | 734 | 002723 (7) | dbj|BAO57286.1| | 3e-93 | V-type proton ATPase subunit [Ipomoea nil] |
| JMFF044A09 | Sequence | 641 | 011618 (8) | dbj|BAO57286.1| | 2e-78 | V-type proton ATPase subunit [Ipomoea nil] | |||||
| JMFF044K06 | Sequence | 630 | 011618 (8) | dbj|BAO57286.1| | 6e-80 | V-type proton ATPase subunit [Ipomoea nil] | 652 | 002723 (7) | dbj|BAO57286.1| | 1e-65 | V-type proton ATPase subunit [Ipomoea nil] |
| JMFF049B24 | Sequence | 627 | 011618 (8) | dbj|BAO57286.1| | 6e-104 | V-type proton ATPase subunit [Ipomoea nil] | 659 | 002723 (7) | dbj|BAO57286.1| | 6e-62 | V-type proton ATPase subunit [Ipomoea nil] |
| JMFS003G06 | Sequence | 592 | 011618 (8) | dbj|BAO57286.1| | 4e-91 | V-type proton ATPase subunit [Ipomoea nil] | |||||
| JMSF020B13 | Sequence | 680 | 011618 (8) | dbj|BAO57286.1| | 5e-115 | V-type proton ATPase subunit [Ipomoea nil] | 782 | 002723 (7) | dbj|BAO57286.1| | 1e-117 | V-type proton ATPase subunit [Ipomoea nil] |
This contig is upended
. : . : . : . : . : . :
JMSF020B13+ CTCTGTGAAAATTTGGAAACA
____________________________________________________________
consensus CTCTGTGAAAATTTGGAAACA
. : . : . : . : . : . :
JMFF049B24+ ATCTTCAGGCTTCACCAAATTG
JMFF032N24+ TTCAGGCTTCACCAAATTG
JMSF020B13+ ACAGCAAGCAGAGTAGTTAAGTGTTCTGACACAACAAGATCTTCAGGCTTCACCAAATTG
____________________________________________________________
consensus ACAGCAAGCAGAGTAGTTAAGTGTTCTGACACAACAAGATCTTCAGGCTTCACCAAATTG
. : . : . : . : . : . :
JMFF049B24+ GACAGATCACGTACAGCTAAGCTTCCCGCCTGCTTACGGTTTATGGCATTAAGTTGGCTA
JMFF032N24+ GACAGATCACGTACAGCTAAGCTTCCCGCCTGCTTACGGTTTATGGCATTAAGTTGGCTA
JMSF020B13+ GACAGATCACGTACAGCTAAGCTTCCCGCCTGCTTACGGTTTATGGCATTAAGTTGGCTA
JMFS003G06+ TTCCCGCCTGCTTACGGTTTATGGCATTAAGTTGGCTA
JMFF044K06+ ACAGATCACGTACAGCTAAGCTTCCCGCCTGCTTACGGTTTATGGCATTAAGTTGGCTA
JMFF044A09+ AAGCTTCCCGCCTGCTTACGGTTTATGGCATTAAGTGGCTNA
____________________________________________________________
consensus GACAGATCACGTACAGCTAAGCTTCCCGCCTGCTTACGGTTTATGGCATTAAGTTGGCTA
. : . : . : . : . : . :
JMFF049B24+ CGAACATTGTTGTACTCAGCAACCCGAACCTTAAGATCATCCTCAATCTTAGCAACTTGG
JMFF032N24+ CGAACATTGTTGTACTCAGCAACCCGAACCTTAAGATCATCCTCAATCTTAGCAACTTGG
JMSF020B13+ CGAACATTGTTGTACTCAGCAACCCGAACCTTAAGATCATCCTCAATCTTAGCAACTTGG
JMFS003G06+ CGAACATTGTTGTACTCAGCAACCCGAACCTTAAGATCATCCTCAATCTTAGCAACTTGG
JMFF044K06+ CGAACATTG-TGTACTCAGCAACCCGAACCTTAAGATCATCCTCAATCTTAGCAACTTGG
JMFF044A09+ CGAACATTG-TTTACTCAGCAACCCGAACCTTAAGATCATCCTCAATCTTAGCAACTTGG
____________________________________________________________
consensus CGAACATTGTTGTACTCAGCAACCCGAACCTTAAGATCATCCTCAATCTTAGCAACTTGG
. : . : . : . : . : . :
JMFF049B24+ GTGTGAACCCCATCAACTGTCTCCCTGAGAGGGGACATTGTTGGATATTTGGCCTCATCC
JMFF032N24+ GTGTGAACCCCATCAACTGTCTCCCTGAGAGGGGACATTGTTGGATATTTGGCCTCATCC
JMSF020B13+ GTGTGAACCCCATCAACTGTCTCCCTGAGAGGGGACATTGTTGGATATTTGGCCTCATCC
JMFS003G06+ GTGTGAACCCCATCAACTGTCTCCCTGAGAGGGGACATTGTTGGATATTTGGCCTCATCC
JMFF044K06+ GTGTGAACCCCATCAACTGTCTCCCTGAGAGGGGACATTGTTGGATATTTGGCCTCATCC
JMFF032N08+ CCTGAGAGGGGACATTGTTGGATATTTGGCCTCATCC
JMFF006F12+ CTGAGAGGGGACATTGTTGGATATTTGGCCTCATCC
JMFF044A09+ GTGTGAACCCCATCAACTGTCTCCCTGAGAGGGGACATTGTTGGATATTTGGCCTCATCC
____________________________________________________________
consensus GTGTGAACCCCATCAACTGTCTCCCTGAGAGGGGACATTGTTGGATATTTGGCCTCATCC
. : . : . : . : . : . :
JMFF049B24+ CACACAAATCTGGTGAGATAAGAGTCCACTGGAACCCCATCCACTGTAAGGGAACTACTG
JMFF032N24+ CACACAAATCTGGTGAGATAAGAGTCCACTGGAACCCCATCCACTGTAAGGGAACTACTG
JMSF020B13+ CACACAAATCTGGTGAGATAAGAGTCCACTGGAACCCCATCCACTGTAAGGGAACTACTG
JMFS003G06+ CACACAAATCTGGTGAGATAAGAGTCCACTGGAACCCCATCCACTGTAAGGGAACTACTG
JMFF044K06+ CACACAAATCTGGTGAGATAAGAGTCCACTGGAACCCCATCCACTGTAAGGGAACTACTG
JMFF032N08+ CACACAAATCTGGTGAGATAAGAGTCCACTGGAACCCCATCCACTGTAAGGGAACTACTG
JMFF006F12+ CACACAAATNTGGTGAGATAAGAGTCCNCTGGAACCCCATCCNCTGTAAGGGAACTACTG
JMFF044A09+ CACACAAATCTGGTGAGATAAGAGTCCACTGGAACCCCATCCACTGTAAGGGAACTACTG
____________________________________________________________
consensus CACACAAATCTGGTGAGATAAGAGTCCACTGGAACCCCATCCACTGTAAGGGAACTACTG
. : . : . : . : . : . :
JMFF049B24+ AGCACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGTCGTATCTTCGAACAAACCCCT
JMFF032N24+ AGCACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGTCGTATCTTCGAACAAACCCCT
JMSF020B13+ AGCACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGTCGTATCTTCGAACAAACCCCT
JMFS003G06+ AGCACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGTCGTATCTTCGAACAAACCCCT
JMFF044K06+ AGCACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGTCGTATCTTCGAACAAACCCCT
JMFF032N08+ AGCACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGTCGTATCTTCGAACAAACCCCT
JMFF006F12+ AGCACNCCAGAAGCCCTCTCCAACTCCTCGATCTGGCGTCGTATNTTCGAACAAACCCCT
JMFF044A09+ AGCACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGTCGTATCTTCGAACAAACCCCT
____________________________________________________________
consensus AGCACACCAGAAGCCCTCTCCAACTCCTCGATCTGGCGTCGTATCTTCGAACAAACCCCT
. : . : . : . : . : . :
JMFF049B24+ TCAATGAAGCTGTTCGACTTGACAAGATCATCGCTGAGCGCAAGAAGCGAATCCAAAGTT
JMFF032N24+ TCAATGAAGCTGTTCGACTTGACAAGATCATCGCTGAGCGCAAGAAGCGAATCCAAAGTT
JMSF020B13+ TCAATGAAGCTGTTCGACTTGACAAGATCATCGCTGAGCGCAAGAAGCGAATCCAAAGTT
JMFS003G06+ TCAATGAAGCTGTTCGACTTGACAAGATCATCGCTGAGCGCAAGAAGCGAATCCAAAGTT
JMFF044K06+ TCAATGAAGCTGTTCGACTTGACAAGATCATCGCTGAGCGCAAGAAGCGAATCCAAAGTT
JMFF032N08+ TCAATGAAGCTGTTCGACTTGACAAGATCATCGCTGAGCGCAAGAAGCGAATCCAAAGTT
JMFF006F12+ TCAATGAAGCTGTTCGACTTGACAAGATCATCGCTGAGCGCAAGAAGCGAATCCAAAGTT
JMFF044A09+ TCAATGAAGCTGTTCGACTTGACAAGATCATCGCTGAGCGCAAGAAGCGAATCCAAAGTT
____________________________________________________________
consensus TCAATGAAGCTGTTCGACTTGACAAGATCATCGCTGAGCGCAAGAAGCGAATCCAAAGTT
. : . : . : . : . : . :
JMFF049B24+ CCAATACGGAGATTCGGAATGTTGAATCTGTAGAGAGGAGTGTCGAAAGAGTGTTTGGAG
JMFF032N24+ CCAATACGGAGATTCGGAATGTTGAATCTGTAGAGAGGAGTGTCGAAAGAGTGTTTGGAG
JMSF020B13+ CCAATACGGAGATTCGGAATGTTGAATCTGTAGAGAGGAGTGTCGAAAGAGTGTTTGGAG
JMFS003G06+ CCAATACGGAGATTCGGAATGTTGAATCTGTAGAGAGGAGTGTCGAAAGAGTGTTTGGAG
JMFF044K06+ CCAATACGGAGATTCGGAATGTTGAATCTGTAGAGAGGAGTGTCGAAAGAGTGTTTGGAG
JMFF032N08+ CCAATACGGAGATTCGGAATGTTGAATCTGTAGAGAGGAGTGTCGAAAGAGTGTTTGGAG
JMFF006F12+ CCAATACGGAGATTCGGAATGTTGAATCTGTAGAGAGGAGTGTCGAAAGAGTGTTTGGAG
JMFF044A09+ CCAATACGGAGATTCGGAATGTTGAATCTGTAGAGAGGAGTGTCGAAAGAGTGTTTGGAG
____________________________________________________________
consensus CCAATACGGAGATTCGGAATGTTGAATCTGTAGAGAGGAGTGTCGAAAGAGTGTTTGGAG
. : . : . : . : . : . :
JMFF049B24+ ATGGAGTCCTGAAGGCTATTCCAGAGAGAAGTGGCGGAAGAGGTTTGCCGGACGGGAAGA
JMFF032N24+ ATGGAGTCCTGAAGGCTATTCCAGAGAGAAGTGGCGGAAGAGGTTTGCCGGACGGGAAGA
JMSF020B13+ ATGGAGTCCTGAAGGCTATTCCAGAGAGAAGTGGCGGAAGAGGTTTGCCGGACGGGAAGA
JMFS003G06+ ATGGAGTCCTGAAGGCTATTCCAGAGAGAAGTGGCGGAAGAGGTTTGCCGCACGGGAAGA
JMFF044K06+ ATGGAGTCCTGAAGGCTATTCCAGAGAGAAGTGGCGGAAGAGGTTTGCCGGACGGGAAGA
JMFF032N08+ ATGGAGTCCTGAAGGCTATTCCAGAGAGAAGTGGCGGAAGAGGTTTGCCGGACGGGAAGA
JMFF006F12+ ATGGAGTCCTGAAGGCTATTCCAGAGAGAAGTGGCGGAAGAGGTTTGCCGGACGGGAAGA
JMFF044A09+ ATGGAGTCCTGAAGGCTATTCCAGAGAGAAGTGGCGGAAGAGGTTTGCCGGACGGGAAGA
____________________________________________________________
consensus ATGGAGTCCTGAAGGCTATTCCAGAGAGAAGTGGCGGAAGAGGTTTGCCGGACGGGAAGA
. : . : . : . : . : . :
JMFF049B24+ GCAACCACCCAGTACCGAGACGCCATTGGAATCGGATCTCTTATTCTGATCTTCTTCGTG
JMFF032N24+ GCAACCACCCAGTACCGAGACGCCATTGGAATCGGATCTCTTATTCTGATCTTCTTCGTG
JMSF020B13+ GCAACCACCCAGTACCGAGACGCCATTGGAATCGGATCTCTTATTCTGATCTTCTTCGTG
JMFS003G06+ GCAACCACCCAGTACCGAGACGCCATTGGAATCGGATCTCTTATTCTGATCTTCTTCGTG
JMFF044K06+ GCAACCACCCAGTACCGAGACGCCATTGGAATCGGATCTCTTATTCTGATCTTCTTCGTG
JMFF032N08+ GCAACCACCCAGTACCGAGACGCCATTGGAATCGGATCTCTTATTCTGATCTTCTTCGTG
JMFF006F12+ GCAACCACCCAGTACCGAGACGCCATTGGAATCGGATCTCTTATTCTGATCTTCTTCGTG
JMFF044A09+ GCAACCACCCAGTACCGAGACGCCATTGGAATCGGATCTCTTATTCTGATCTTCTTCGTG
____________________________________________________________
consensus GCAACCACCCAGTACCGAGACGCCATTGGAATCGGATCTCTTATTCTGATCTTCTTCGTG
. : . : . : . : . : . :
JMFF049B24+ CTTTACTGCAACAATTCGAGTTCGATTGCAGGAAACAGAACTGGATCAAAGC
JMFF032N24+ CTTTACTGCAACAATTCGAGTTCGATTGCAGGAAACAGAACTGGATCAAAGCAG
JMSF020B13+ CTTTACTGCAACAATTCGAGTTCGATTGCAGGAAACAGAACTGGATCAAAGCAGTCCG
JMFS003G06+ CTTTACTGCAACAATTCGAGTTCGATTGCAGGAAACAGAACTGGATCAAAGCAGTCCGAC
JMFF044K06+ CTTTACTGCAACAATTCGAGTTCGATTGCAGGAAACAGAACTGGATCAAAGCAGTCCGAC
JMFF032N08+ CTTTACTGCAACAATTCGAGTTCGATTGCAGGAAACAGAACTGGATCAAAGCAGTCCGAC
JMFF006F12+ CTTTACTGCAACAATTCGAGTTCGATTGCAGGAAACAGAACTGGATCAAAGCAGTCCGAC
JMFF044A09+ CTTTACTGCAACAATTCGAGTTCGATTGCAGGAAACAGAACTGGATCAAAGCAGTCCGAC
____________________________________________________________
consensus CTTTACTGCAACAATTCGAGTTCGATTGCAGGAAACAGAACTGGATCAAAGCAGTCCGAC
. : . : . : . : . : . :
JMFS003G06+ TCCTCTCTGATCAC
JMFF044K06+ TCCTCTCTGATCACTCTCTCTGTATATGAATC
JMFF032N08+ TCCTCTCTGATCACTCTCTCTGTATATGAATC
JMFF006F12+ TCCTCTCTGATCACTCTCTCTGTATATGAATC
JMFF044A09+ TCCTCTCTGATCACTCTCTCTGTATATGAATCTACAAATGTCCTAATTAAGTTTTAAGGT
____________________________________________________________
consensus TCCTCTCTGATCACTCTCTCTGTATATGAATCTACAAATGTCCTAATTAAGTTTTAAGGT