Contig 011615:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040C08Sequence483011615 (11)ref|XP_009595108.1|2e-11PREDICTED: nucleolin-like [Nicotiana tomentosiformis]741011615 (11)ref|XP_009796211.1|3e-12PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X
JMFF043K08Sequence587011615 (11)ref|XP_009796211.1|9e-11PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X519011615 (11)ref|XP_009796211.1|6e-07PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X
JMFN019J04Sequence499011615 (11)
JMSF011O06Sequence282011615 (11)695011615 (11)ref|XP_009796211.1|5e-12PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X
JMSF017K18Sequence376011615 (11)ref|XP_009796211.1|2e-12PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X735011615 (11)ref|XP_009796211.1|5e-12PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X
JMSF017L18Sequence504011615 (11)ref|XP_009595108.1|7e-08PREDICTED: nucleolin-like [Nicotiana tomentosiformis]747011615 (11)ref|XP_009796211.1|6e-12PREDICTED: prostatic spermine-binding protein-like [Nicotiana sylvestris] ref|X

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN019J04+ CAAGT
rJMFF040C08- T
                      ____________________________________________________________
consensus CAAGT
 
. : . : . : . : . : . :
JMFN019J04+ AAAGTGAATCAAATGGAGCATATGCCATAAGTCGCAACAATCTCTCACATAATAAAAGCA
rJMFF040C08- AAAGTGAATCAAATGGAACATATACCATAAGTCACAACAATCTCTCACATAATAAAAGCA
rJMSF017K18- CAACAATCTCTCACATAATAAAAGCA
rJMSF017L18- GTCACAACAATCTCTCACATAATAAAAGCA
                      ____________________________________________________________
consensus AAAGTGAATCAAATGGAGCATATGCCATAAGTCACAACAATCTCTCACATAATAAAAGCA
 
. : . : . : . : . : . :
JMFN019J04+ GTTCACAGTCTAAACAAGGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
rJMFF040C08- GTTCACAGTCTAAACAAGGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
rJMSF017K18- GTTCACAGTCTAAACAAGGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
rJMSF017L18- GTTCACAGTCTAAACAAGGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
rJMSF011O06- GGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
                      ____________________________________________________________
consensus GTTCACAGTCTAAACAAGGATGGTCAATTTCCTAAGCTACAAAGAGCCAGACAAAGCTAA
 
. : . : . : . : . : . :
JMFN019J04+ ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
rJMFF040C08- ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
rJMSF017K18- ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
rJMSF017L18- ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
rJMFF043K08- ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
rJMSF011O06- ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
                      ____________________________________________________________
consensus ACTTGGGTCCTAGTTACTAAGATATAATAATCCCAACCATTACATGGAGGCAGGTAGAAT
 
. : . : . : . : . : . :
JMFN019J04+ GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
rJMFF040C08- GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
rJMSF017K18- GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
rJMSF017L18- GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
rJMFF043K08- GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
rJMSF011O06- GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
                      ____________________________________________________________
consensus GAACATCATCTAAAACACCTTCACTTCCTCTTCTTGGCGGGTGGTTGGTCCTCTTCGTCC
 
. : . : . : . : . : . :
JMFN019J04+ TCCTCGTCCTCTTGTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATGG
rJMFF040C08- TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
rJMSF017K18- TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
rJMSF017L18- TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
rJMFF043K08- TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
rJMSF011O06- TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
JMFF043K08+ TCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
                      ____________________________________________________________
consensus TCCTCGTCCTCTTCTTCTTCGTCCTCCTCGTCACCGTCCTCGTCCTCGTCTCCATCATCG
 
. : . : . : . : . : . :
JMFN019J04+ TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
rJMFF040C08- TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
rJMSF017K18- TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
rJMSF017L18- TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
rJMFF043K08- TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
rJMSF011O06- TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
JMFF040C08+ CGGGATCC
JMSF017L18+ TGGCTGTGGGATCTTCCTCGGGATCC
JMFF043K08+ TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
                      ____________________________________________________________
consensus TCTTCATCATCATCGTCGCTGCCTTCATTTCCGTTGGCTGTGGGATCTTCCTCGGGATCC
 
. : . : . : . : . : . :
JMFN019J04+ CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
rJMFF040C08- CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
rJMSF017K18- CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
rJMSF017L18- CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
rJMFF043K08- CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
rJMSF011O06- CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
JMFF040C08+ CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
JMSF017L18+ CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
JMFF043K08+ CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
                      ____________________________________________________________
consensus CCTTCATCGTCATCATCTCCTCCCCCTTCTTCACCCGAGAAGTCTTCATCCCCAGCATCA
 
. : . : . : . : . : . :
JMFN019J04+ TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
rJMFF040C08- TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
rJMSF017K18- TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
rJMSF017L18- TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
rJMFF043K08- TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
rJMSF011O06- TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
JMFF040C08+ TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
JMSF017K18+ TCATCCTCGGTATCACTG
JMSF017L18+ TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
JMFF043K08+ TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
                      ____________________________________________________________
consensus TCATCATCCTGTTCATCGCCATCACCATCGTCATCTTCATCGTCATCCTCGGTATCACTG
 
. : . : . : . : . : . :
JMFN019J04+ CCATCTTTATTCTC
rJMFF040C08- CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
rJMSF017K18- CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
rJMSF017L18- CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
rJMFF043K08- CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
rJMSF011O06- CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
JMFF040C08+ CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
JMSF017K18+ CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
JMSF017L18+ CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
JMFF043K08+ CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
                      ____________________________________________________________
consensus CCATCTTTATTCTCAACCTCAGCTTCGTTCTTTTTGTGGAGCTCCTCAAAGGGAAACCTT
 
. : . : . : . : . : . :
rJMFF040C08- TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
rJMSF017K18- TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
rJMSF017L18- TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
rJMFF043K08- TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
rJMSF011O06- TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
JMFF040C08+ TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
JMSF017K18+ TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
JMSF017L18+ TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
JMSF011O06+ ATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
JMFF043K08+ TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
                      ____________________________________________________________
consensus TGTTCCACCCCTGACAGATCTGGCAATGCACCATTGTTCCTCAGAAGGCATCCCGTCAGT
 
. : . : . : . : . : . :
rJMFF040C08- ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
rJMSF017K18- ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
rJMSF017L18- ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
rJMFF043K08- ATGAACAGAC-GGCAACAGATCTCTGAGCAAC
rJMSF011O06- ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
JMFF040C08+ ATGAACAGACAGGCAACAGATCTNTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
JMSF017K18+ ATGAACAGACAGGCAACAGATNTNTGAGCAACCAAAAGGGTNTCAGCAACCACAGCTTCC
JMSF017L18+ ATGAACAGACAGGCAACAGATCTNTGAGCAACCAAAAGGGTNTCAGCAACCACAGCTTCC
JMSF011O06+ ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
JMFF043K08+ ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
                      ____________________________________________________________
consensus ATGAACAGACAGGCAACAGATCTCTGAGCAACCAAAAGGGTCTCAGCAACCACAGCTTCC
 
. : . : . : . : . : . :
rJMFF040C08- AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
rJMSF017K18- AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
rJMSF017L18- AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
rJMSF011O06- AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
JMFF040C08+ AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
JMSF017K18+ AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTNTGAGCTCAAACCACCCACC
JMSF017L18+ AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTNTGAGCTCAAACCACCCACC
JMSF011O06+ AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTNTGAGCTCAAACCACCCACC
JMFF043K08+ AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCA-CCACC
                      ____________________________________________________________
consensus AACACAGACATCACCACAGTTTCCGTCAGGGCAGGCACTTCTGAGCTCAAACCACCCACC
 
. : . : . : . : . : . :
rJMFF040C08- TCCATTGCTTTAAAAA
rJMSF017K18- TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCC
rJMSF017L18- TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAA
rJMSF011O06- TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTAC
JMFF040C08+ TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
JMSF017K18+ TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
JMSF017L18+ TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
JMSF011O06+ TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
JMFF043K08+ TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
                      ____________________________________________________________
consensus TCCATTGCTTTAAAAAAAAATAGGGAAAATAATCTGCCAAAATTACAGAAAAAAGTGAAG
 
. : . : . : . : . : . :
JMFF040C08+ AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGC
JMSF017K18+ AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGCGC
JMSF017L18+ AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGCGC
JMSF011O06+ AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGCGC
JMFF043K08+ AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGCGCCCG
                      ____________________________________________________________
consensus AGAGAGAAAGAGAAATTTAGAGAGAGAGAAACAGAGCGGTGAGGACAGGGGGAGCGCCCG