Contig 011592:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004C18Sequence539011592 (7)ref|XP_006482672.1|195PREDICTED: serine carboxypeptidase-like 46-like [Citrus sinensis]526001865 (5)ref|XP_010322561.1|2e-50PREDICTED: serine carboxypeptidase-like 46 isoform X3 [Solanum lycopersicum]
JMFF011B17Sequence545011592 (7)ref|XP_006431097.1|4e-65hypothetical protein CICLE_v10013776mg [Citrus clementina] gb|ESR44337.1| hypoth743013646 (3)ref|XP_010322561.1|1e-50PREDICTED: serine carboxypeptidase-like 46 isoform X3 [Solanum lycopersicum]
JMFF019I15Sequence553011592 (7)ref|XP_006431097.1|3e-57hypothetical protein CICLE_v10013776mg [Citrus clementina] gb|ESR44337.1| hypoth727001865 (5)ref|XP_010322561.1|5e-54PREDICTED: serine carboxypeptidase-like 46 isoform X3 [Solanum lycopersicum]
JMFF020K15Sequence527011592 (7)ref|XP_006431097.1|2e-61hypothetical protein CICLE_v10013776mg [Citrus clementina] gb|ESR44337.1| hypoth742013646 (3)ref|XP_010322561.1|2e-52PREDICTED: serine carboxypeptidase-like 46 isoform X3 [Solanum lycopersicum]
JMFF027O10Sequence543011592 (7)ref|XP_006431097.1|1e-56hypothetical protein CICLE_v10013776mg [Citrus clementina] gb|ESR44337.1| hypoth724001865 (5)ref|XP_010322561.1|4e-54PREDICTED: serine carboxypeptidase-like 46 isoform X3 [Solanum lycopersicum]
JMFF030H11Sequence543011592 (7)ref|XP_006482672.1|196PREDICTED: serine carboxypeptidase-like 46-like [Citrus sinensis]716001865 (5)ref|XP_010322561.1|5e-54PREDICTED: serine carboxypeptidase-like 46 isoform X3 [Solanum lycopersicum]
JMFF037I20Sequence554011592 (7)gb|KDO72510.1|5e-60hypothetical protein CISIN_1g039529mg [Citrus sinensis]738013646 (3)ref|XP_010322561.1|2e-53PREDICTED: serine carboxypeptidase-like 46 isoform X3 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF011B17+                           TCTCCGGCAATGTAAAAATCTAGGTCTCTGTATTCAGAGAATTC
JMFF019I15+                               CGGCAATGTAAAAATCCAGATTTCTGTATTCATAGAATCT
JMFF004C18+                               CGGCAATGTAAAAATCCAGATTTCTGTATTCATAGAATCT
JMFF030H11+                               CGGCAATGTAAAAATCCAGATTTCTGTATTCATAGAATCT
JMFF027O10+                               CGGCAATGTAAAAATCCAGATTCCTGTATTCATAGAATCT
                      ____________________________________________________________
consensus                             TCTCCGGCAATGTAAAAATCCAGATTTCTGTATTCATAGAATCT
 
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JMFF011B17+           AATAAACCACTTTCGAAGAAACTTCAAATTTTCACGGGCTGTCATGGTATCACTCCATAT
JMFF019I15+           AAGAAACCACTTTCGAAGAAACTTCAAATTTTCATAGGCTGTCTCGAAATCACACCATGC
JMFF004C18+           AAGAAACCACTTTCGAAGAAACTTCAAATTTTCATAGGCTGTCTCGAAATCACACCATGC
JMFF030H11+           AAGAAACCACTTTCGAAGAAACTTCAAATTTTCATAGGCTGTCTCGAAATCACACCATGC
JMFF027O10+           AAGAAACCACTTTCGAAGAAACTTCAAATTTTCATAGGCTGTCTCGAAATCACACCATGC
                      ____________________________________________________________
consensus             AAGAAACCACTTTCGAAGAAACTTCAAATTTTCATAGGCTGTCTCGAAATCACACCATGC
 
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JMFF011B17+           TTTATAATCTGAGCTTGTATTGGAGTATGAAAATGCAACTCCAATAGGAGTGTCTACGTA
JMFF020K15+                                                         GGAGTGTCTACGTA
JMFF019I15+           TTGGTAGTCTGAGGTTGTATTCGAGAATGAATATGCAACT---ATTGGAGTGTCTACGTA
JMFF004C18+           TTGGTAGTCTGAGGTTGTATTCGAGAATGAATATGCAACT---ATTGGAGTGTCTACGTA
JMFF030H11+           TTGGTAGTCTGAGGTTGTATTCGAGAATGAATATGCAACT---ATTGGAGTGTCTACGTA
JMFF027O10+           TTGGTAGTCTGAGGTTGTATTCGAGAATGAATATGCAACT---ATTGGAGTGTCTACGTA
JMFF037I20+                                                         GGAGTGTCTACGTA
                      ____________________________________________________________
consensus             TTGGTAGTCTGAGGTTGTATTCGAGAATGAATATGCAACT---ATTGGAGTGTCTACGTA
 
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JMFF011B17+           TAACATGTTCGACGCTAAATTCCAAGAAAACTGGTTCTTTACCAGCTCTCCATCTTCTGT
JMFF020K15+           TAACATGTTCGACGCTAAATTCCAAGAAAACTGGTTCTTTACCAGCTCTCCATCTTCTGT
JMFF019I15+           TAACATGTTCGACACTAAATTCCAAGAATATGGGTTCTTTACCAGCTTCCCATCCTTTGT
JMFF004C18+           TAACATGTTCGACACTAAATTCCAAGAATATGGGTTCTTTACCAGCTTCCCATCCTTTGT
JMFF030H11+           TAACATGTTCGACACTAAATTCCAAGAATATGGGTTCTTTACCAGCTTCCCATCCTTTGT
JMFF027O10+           TAACATGTTCGACACTAAATTCCAAGAATATGGGTTCTTTACCAGCTTCCCATCCTTTGT
JMFF037I20+           TAACATGTTCGACGCTAAATTCCAAGAAAACTGGTTCTTTACCAGCTCTCCATCTTCTGT
                      ____________________________________________________________
consensus             TAACATGTTCGACACTAAATTCCAAGAATATGGGTTCTTTACCAGCTTCCCATCCTTTGT
 
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JMFF011B17+           CGGCCTAAATGGACCATTTTCGTAGAACATCCCAATAGCAGCACTGGAACAATCATGACC
JMFF020K15+           CGGCCTAAATGGACCATTTTCGTAGAACATCCCAATAGCAGCACTGGAACAATCATGACC
JMFF019I15+           CGGCCTAAATGGACCATGTTCGTAGAACATCCCAACAGTTGCAATGGAACAATCATGGCC
JMFF004C18+           CGGCCTAAATGGACCATGTTCGTAGAACATCCCAACAGTTGCAATGGAACAATCATGGCC
JMFF030H11+           CGGCCTAAATGGACCATGTTCGTAGAACATCCCAACAGTTGCAATGGAACAATCATGGCC
JMFF027O10+           CGGCCTAAATGGACCATGTTCGTAGAACATCCCAACAGTTGCAATGGAACAATCATGGCC
JMFF037I20+           CGGCCTAAATGGACCATTTTCGTAGAACATCCCAATAGCAGCACTGGAACAATCATGACC
                      ____________________________________________________________
consensus             CGGCCTAAATGGACCATGTTCGTAGAACATCCCAACAGTTGCAATGGAACAATCATGGCC
 
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JMFF011B17+           TCCCCCCAGCCAAAGTGTAAGCGGCATTGAGAATTTATCTTCTGATTGGGCTTCTGCAAA
JMFF020K15+           TCCCCCCAGCCAAAGTGTAAGCGGCATTGAGAATTTATCTTCTGATTGGGCTTCTGCAAA
JMFF019I15+           TCCCCCCAGCCAAAGTGTAAGCGGCTTTGATAATTCATCTTCTGATTGGGCTCCAGCAAA
JMFF004C18+           TCCCCCCAGCCAAAGTGTAAGCGGCTTTGATAATTCATCTTCTGATTGGGCTCCAGCAAA
JMFF030H11+           TCCCCCCAGCCAAAGTGTAAGCGGCTTTGATAATTCATCTTCTGATTGGGCTCCAGCAAA
JMFF027O10+           TCCCCCCAGCCAAAGTGTAAGCGGCTTTGATAATTCATCTTCTGATTGGGCTCCAGCAAA
JMFF037I20+           TCCCCCCAGCCAAAGTGTAAGCGGCATTGAGAATTTATCTTCTGATTGGGCTTCTGCAAA
                      ____________________________________________________________
consensus             TCCCCCCAGCCAAAGTGTAAGCGGCTTTGATAATTCATCTTCTGATTGGGCTCCAGCAAA
 
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JMFF011B17+           ATAGTAGAATAGAGCTCTGCCACGAAATTTATGTGTAACAATATACCCAGAGTACTGATT
JMFF020K15+           ATAGTAGAATAGAGCTCTGCCACGAAACTTATGTGTAACAATATACCCAGAGTACTGATT
JMFF019I15+           ATAGTAGAATAGAGCTCTACCACGAGATTTATCTGTAACAATATACCCGGAGAACTGAGT
JMFF004C18+           ATAGTAGAATAGAGCTCTACCACGAGATTTATCTGTAACAATATACCCAGAGAACTGAGT
JMFF030H11+           ATAGTAGAATAGAGCTCTACCACGAGATTTATCTGTAACAATATACCCAGAGAACTGAGT
JMFF027O10+           ATAGTAGAATAGAGCTCTACCACGAGATTTATCTGTAACAATATACCCAGAGAACTGAGT
JMFF037I20+           ATAGTAGAATAGAGCTCTGCCACGAAATTTATGTGTAACAATATACCCAGAGTACTGATT
                      ____________________________________________________________
consensus             ATAGTAGAATAGAGCTCTACCACGAGATTTATCTGTAACAATATACCCAGAGAACTGAGT
 
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JMFF011B17+           GAAGTCCACATCCGAGGGCTGCCCCGGGAGAGAATCTATTATTTCACCATTAATCCTTAT
JMFF020K15+           GAAGTCCACATCCGAGGGCTGCCCCGGGAGAGAATCTATTATTTCACCATTAATCCTTAT
JMFF019I15+           GAAGCTCACATCCGAGGGCTGCCCCGGGAGAGAATCTATCATTTCACCATTAATCCTTAT
JMFF004C18+           GAAGCTCACATCCGAGGGCTGCCCCGGGAGAGAATCTATCATTTCACCATTAATCCTTAT
JMFF030H11+           GAAGCTCACATCCGAGGGCTGCCCCGGGAGAGAATCTATCATCTCACCATTAATCCTTAT
JMFF027O10+           GAAGCTCACATCCGAGGGCTGCCCCGGGAGAGAATCTATCATTTCACCATTAATCCTTAT
JMFF037I20+           GAAGTCCACATCCGAGGGCTGCCCCGGGAGAGAATCTATTATTTCACCATTAATCCTTAT
                      ____________________________________________________________
consensus             GAAGCTCACATCCGAGGGCTGCCCCGGGAGAGAATCTATCATTTCACCATTAATCCTTAT
 
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JMFF011B17+           TGAGATGGAATATAGTGTATTCACCAACAAGAACCATAATAAGAAAACCATTATTTTTT 
JMFF020K15+           TGAGATGGAATATAGTGTATTCACCAACAAGAACCATAATAAGAAAACCATTATTTTTT 
JMFF019I15+           TGAGATGGAACATAATGTATTCACCAACAAGAACCATAATAAGAAAACCATTATTTTTT 
JMFF004C18+           TGAGATGGAACATAATGTATTCACCAACAAGAACCATAATAAGAAAACCATTATTTTTTT
JMFF030H11+           TGAGATGGAACATAATGTATTCACCAACAAGAACCATAATAAGAAAACCATTATTTTTTT
JMFF027O10+           TGAGATGGAACATAATGTATTCACCAACAAGAACCATAATAAGAAAACCATTACTTTTTT
JMFF037I20+           TGAGATGGAATATAGTGTATTCACCAACAAGAACCATAATAAGAAAACCATTATTTTTTA
                      ____________________________________________________________
consensus             TGAGATGGAACATAATGTATTCACCAACAAGAACCATAATAAGAAAACCATTATTTTTTT
 
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JMFF004C18+           T                                                           
JMFF030H11+           T                                                           
JMFF027O10+           T                                                           
JMFF037I20+           AATGATATCTATGATGAAAGTGAAGGCCTAATTAAGTTTTTAATCACCTACCTATATAGC
                      ____________________________________________________________
consensus             TATGATATCTATGATGAAAGTGAAGGCCTAATTAAGTTTTTAATCACCTACCTATATAGC