Contig 011580:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF011B03-                                                                    CA
                      ____________________________________________________________
consensus                                                                       CA
 
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rJMFF011B03-          TCTGATCATANNATCAAAGCATCATCTCTGGCCAGACAAGGCATCAAAAGGATCATACCA
                      ____________________________________________________________
consensus             TCTGATCATANNATCAAAGCATCATCTCTGGCCAGACAAGGCATCAAAAGGATCATACCA
 
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rJMFF011B03-          ATAAGATCANAGAACAGTTTGAACAAGAGGATGCAGCTAAACTANAGGATCATATGTACG
                      ____________________________________________________________
consensus             ATAAGATCANAGAACAGTTTGAACAAGAGGATGCAGCTAAACTANAGGATCATATGTACG
 
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rJMFF011B03-          ACTCCAATATATAANGCATTCGGTGAATGTAAATAAATTCNAGCGTTTTTAGTACAGNCG
rJMFF032I23-                                             AATTCGAGCGTTTTTAGTACAGTCG
                      ____________________________________________________________
consensus             ACTCCAATATATAANGCATTCGGTGAATGTAAATAAATTCGAGCGTTTTTAGTACAGTCG
 
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rJMFF011B03-          NATCAGTTCCAATTATCACATTACCCAGCAGCTTGAAAATCCCCANAGTCATCGTCTTCA
rJMFF032I23-          TATCAGTTCCAATTATCACATTACCCAGCAGCTTGAAAATCCCCAAAGTCATCGTCTTCA
                      ____________________________________________________________
consensus             TATCAGTTCCAATTATCACATTACCCAGCAGCTTGAAAATCCCCAAAGTCATCGTCTTCA
 
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rJMFF011B03-          ACTTCCTGTGAGCGTAGGTTTCCANNTGATTTAGATTTGCCTGATTGTTCAACATCATGG
rJMFF032I23-          ACTTCCTGTGAGCGTAGGTTTCCAGTTGATTTAGATTTGCCTGATTGTTCAACATCAGGG
                      ____________________________________________________________
consensus             ACTTCCTGTGAGCGTAGGTTTCCAGTTGATTTAGATTTGCCTGATTGTTCAACATCATGG
 
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rJMFF011B03-          GCGGGATCCTTCCCATCANGAGAGTTATCGAGACTACATTTGCGGGGTGACCCTGAAGGA
rJMFF032I23-          GCGGGATCCTTCCCATCAGGAGAGTTATCGAGACTAGATTTGCGGGGTGACCCTGAAGGA
                      ____________________________________________________________
consensus             GCGGGATCCTTCCCATCAGGAGAGTTATCGAGACTAGATTTGCGGGGTGACCCTGAAGGA
 
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rJMFF011B03-          GAATTATCTG                                                  
rJMFF032I23-          GAATTATCTGCAGTAGTAGCAACGGGCGTTAGGGGAGGTGGCGGGAGTTTAAGTAGTAGT
                      ____________________________________________________________
consensus             GAATTATCTGCAGTAGTAGCAACGGGCGTTAGGGGAGGTGGCGGGAGTTTAAGTAGTAGT
 
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rJMFF032I23-          GGGCATTCTTTTCGGGCCGCCTTGACATCCAACGATAGATTGTTTAAACTTTGCTCGAAG
                      ____________________________________________________________
consensus             GGGCATTCTTTTCGGGCCGCCTTGACATCCAACGATAGATTGTTTAAACTTTGCTCGAAG
 
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rJMFF032I23-          AACTTTGACCTTATGCTGCTGCCACTTCCAGCTTTCTGTTGTGTCATATTTTTAAGTTGA
                      ____________________________________________________________
consensus             AACTTTGACCTTATGCTGCTGCCACTTCCAGCTTTCTGTTGTGTCATATTTTTAAGTTGA
 
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rJMFF032I23-          AGTACGAGAGTCTCCCCCTCTTTCAAACTGTAATCAACTGATGTCGTTTTCTGGAATTGT
JMFF032I23+                                                CTGATGTCGTTTTCTGGAATTGT
                      ____________________________________________________________
consensus             AGTACGAGAGTCTCCCCCTCTTTCAAACTGTAATCAACTGATGTCGTTTTCTGGAATTGT
 
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rJMFF032I23-          TGTTCCATCTCTTCAGCAGTTTTCTTCTTATTTAGGTACTTCATATGGTCATGAAGGGCA
JMFF034E19+                  TCTCTTCAGCAGTTTTCTTCTTATTTAGGTACTTCATATGGTCATGAAGGGCA
JMFF011B03+                                                        TGGTCATGAAGGGCA
JMFF032I23+           TGTTCCATCTCTTCAGCAGTTTTCTTCTTATTTAGGTACTTCATATGGTCATGAAGGGCA
                      ____________________________________________________________
consensus             TGTTCCATCTCTTCAGCAGTTTTCTTCTTATTTAGGTACTTCATATGGTCATGAAGGGCA
 
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rJMFF032I23-          GCTTGGAAGTCATAAGCTTCAGGTCTTTCCCGGAATCCAATGCCAAGAAAAGCATGCCTA
JMFF034E19+           GCTTGGAAGTCATAAGCTTCAGGTCTTTCCCGGAATCCAATGCCAAGAAAAGCATGCCTA
JMFF011B03+           GCTTGGAAGTCATAAGCTTCAGGTCTTTCCCGGAATCCAATGCCAAGAAAAGCATGCCTA
JMFF032I23+           GCTTGGAAGTCATAAGCTTCAGGTCTTTCCCGGAATCCAATGCCAAGAAAAGCATGCCTA
                      ____________________________________________________________
consensus             GCTTGGAAGTCATAAGCTTCAGGTCTTTCCCGGAATCCAATGCCAAGAAAAGCATGCCTA
 
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rJMFF032I23-          CGGCGACCACCAATATTCTCTTCTACTCGGAGAACAAAGTATCTGCTACTATCAATCACT
JMFF034E19+           CGGCGACCACCAATATTCTCTTCTACTCGGAGAACAAAGTATCTGCTACTATCAATCACT
JMFF011B03+           CGGCGACCACCAATATTCTCTTCTACTCGGAGAACAAAGTATCTGCTACTATCAATCACT
JMFF032I23+           CGGCGACCACCAATATTCTCTTCTACTCGGAGAACAAAGTATCTGCTACTATCAATCACT
                      ____________________________________________________________
consensus             CGGCGACCACCAATATTCTCTTCTACTCGGAGAACAAAGTATCTGCTACTATCAATCACT
 
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rJMFF032I23-          GGCTCCACTGGATGAGGCTCCCCGTCTCTCAGGAAAGCCCGGGCATAAAGTTCACCCGTT
JMFF034E19+           GGCTCCACTGGATGAGGCTCCCCGTCTCTCAGGAAAGCCCGGGCATAAAGTTCACCCGTT
JMFF011B03+           GGCTCCACTGGATGAGGCTCCCCGTCTCTCAGGAAAGCCCGGGCATAAAGTTCACCCGTT
JMFF032I23+           GGCTCCACTGGATGAGGCTCCCCGTCTCTCAGGAAAGCCCGGGCATAAAGTTCACCCGTT
                      ____________________________________________________________
consensus             GGCTCCACTGGATGAGGCTCCCCGTCTCTCAGGAAAGCCCGGGCATAAAGTTCACCCGTT
 
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rJMFF032I23-          GTCTTGTCTTCAAGTCTGATTATGCATTCTTCTCCTTTGCTTAAAACCTTTAGT      
JMFF034E19+           GTCTTGTCTTCAAGTCTGATTATGCATTCTTCTCCTTTGCTTAAAACCTTTAGTGCACCC
JMFF011B03+           GTCTTGTCTTCAAGTCTGATTATGCATTCTTCTCCTTTGCTTAAAACCTTTAGTGCACCC
JMFF032I23+           GTCTTGTCTTCAAGTCTGATTATGCATTCTTCTCCTTTGCTTAAAACCTTTAGTGCACCC
                      ____________________________________________________________
consensus             GTCTTGTCTTCAAGTCTGATTATGCATTCTTCTCCTTTGCTTAAAACCTTTAGTGCACCC
 
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JMFF034E19+           TCCCATGCCCATTTGTTCACATTCCACTCGTCAGCCCTGTATGAAGCTGCACTTTTTCTG
JMFF011B03+           TCCCATGCCCATTTGTTCACATTCCACTCGTCAGCCCTGTATGAAGCTGCACTTTTTCTG
JMFF032I23+           TCCCATGCCCATTTGTTCACATTCCACTCGTCAGCCCTGTATGAAGCTGCACTTTTTCTG
                      ____________________________________________________________
consensus             TCCCATGCCCATTTGTTCACATTCCACTCGTCAGCCCTGTATGAAGCTGCACTTTTTCTG
 
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JMFF034E19+           GGAGGAATCAGGTAAACATAGCATTCTGATACTTGAAAGAGAATAAGCTCTATTGCTTCT
JMFF011B03+           GGAGGAATCAGGTAAACATAGCATTCTGATACTTGAAAGAGAATAAGCTCTATTGCTTCT
JMFF032I23+           GGAGGAATCAGGTAAACATAGCATTCTGATACTTGAAAGAGAATAAGCTCTATTGCTTCT
                      ____________________________________________________________
consensus             GGAGGAATCAGGTAAACATAGCATTCTGATACTTGAAAGAGAATAAGCTCTATTGCTTCT
 
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JMFF034E19+           TCTTCGGACTCTTCTGGTTTCGGGTCTGTGCTCTTTTCTGTCTCCATGATCTAATCAATC
JMFF011B03+           TCTTCGGACTCTTCTGGTTTCGGGTCTGTGCTCTTTTCTGTCTCCATGATCTAATCAATC
JMFF032I23+           TCTTCGGACTCTTCTGGTTTCGGGTCTGTGCTCTTTTCTGTCTCCATGATCTAATCAATC
                      ____________________________________________________________
consensus             TCTTCGGACTCTTCTGGTTTCGGGTCTGTGCTCTTTTCTGTCTCCATGATCTAATCAATC
 
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JMFF034E19+           TTAGCAGCTTCGCCCAATAGCTGAATTGTGATGAATTGCAGTCGGGAGATCAGTGTGAAC
JMFF011B03+           TTAGCAGCTTCGCCCAATAGCTGAATTGTGATGAATTGCAGTCGGGAGATCAGTGTGAAC
JMFF032I23+           TTAGCAGCTTCGCCCAATAGCTGAATTGTGATGAATTGCAGTCGGGAGATCAGTGTGAAC
                      ____________________________________________________________
consensus             TTAGCAGCTTCGCCCAATAGCTGAATTGTGATGAATTGCAGTCGGGAGATCAGTGTGAAC
 
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JMFF034E19+           ACCGGGTCTGATTGGCCTGAATC                                     
JMFF011B03+           ACCGGGTCTGATTGGCCTGAATC                                     
JMFF032I23+           ACCGGGTCTGATTGGCCTGAATCGGTAAGCAAGTTAGGAATTCCGGATATATCAATTCCT
                      ____________________________________________________________
consensus             ACCGGGTCTGATTGGCCTGAATCGGTAAGCAAGTTAGGAATTCCGGATATATCAATTCCT