Contig 011569:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030F11Sequence495011569 (3)emb|CDP13025.1|2e-13unnamed protein product [Coffea canephora]654013821 (2)
JMFF045I16Sequence647011569 (3)emb|CDP13025.1|1e-28unnamed protein product [Coffea canephora]594013821 (2)
JMFN003H14Sequence614011569 (3)ref|XP_004241961.1|6e-30PREDICTED: extensin-like [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN003H14+ GAAGTTGGGGACGGTTTATTGGCGTCAAGGGAGGGGGCTTAATCTTTTGCAACCT
JMFF045I16+ GGACGGTTTATTGGCGTCAAGGGAGGGGGCTTAATCTTTTGCAACCT
                      ____________________________________________________________
consensus GAAGTTGGGGACGGTTTATTGGCGTCAAGGGAGGGGGCTTAATCTTTTGCAACCT
 
. : . : . : . : . : . :
JMFN003H14+ AGTATTTTGCGGTTTGGGAGCATTCGGGGGTCTAGGAGCAGGCTCACGCAAAGGCGAGCC
JMFF045I16+ AGTATTTGNCGGTTTGGGAGCATTCGGGGGTCTAGGAGCAGGCTCACGCAAAGGCGAGCC
                      ____________________________________________________________
consensus AGTATTTTGCGGTTTGGGAGCATTCGGGGGTCTAGGAGCAGGCTCACGCAAAGGCGAGCC
 
. : . : . : . : . : . :
JMFN003H14+ CGTCAGCTGTTGAACTATGCTCCGGAAATCGTTCTTGTTTATATTGTAGACCTGCGGTTG
JMFF045I16+ CGTCAGCTGTTGAACTATGCTCCGGAAATCGTTCTTGTTTATATTGTAGACCTGCGGTTG
JMFF030F11+ GTAGACCTGCGGTTG
                      ____________________________________________________________
consensus CGTCAGCTGTTGAACTATGCTCCGGAAATCGTTCTTGTTTATATTGTAGACCTGCGGTTG
 
. : . : . : . : . : . :
JMFN003H14+ AGGTTGAGGCCGAGCACCCCCCGCATTAGCATTGCTGAAATTCGGTTGGTGTATCGGGCT
JMFF045I16+ AGGTTGAGGCCGAGCACCCCCCGCATTAGCATTGCTGAAATTCGGTTGGTGTATCGGGCT
JMFF030F11+ AGGTTGAGGCCGAGCACCCCCCGCATTAGCATTGCTGAAATTCGGTTGGTGTATCGGGCT
                      ____________________________________________________________
consensus AGGTTGAGGCCGAGCACCCCCCGCATTAGCATTGCTGAAATTCGGTTGGTGTATCGGGCT
 
. : . : . : . : . : . :
JMFN003H14+ CTTCTTTATATTCTTCCCCATCTTATTCACCCCCAAAGTATCTGGATGTCTACCCATCTG
JMFF045I16+ CTTCTTTATATTCTTCCCCATCTTATTCACCCCCAAAGTATCTGGATGTCTACCCATCTG
JMFF030F11+ CTTCTTTATATTCTTCCCCATCTTATTCACCCCCAAAGTATCTGGATGTCTACCCATCTG
                      ____________________________________________________________
consensus CTTCTTTATATTCTTCCCCATCTTATTCACCCCCAAAGTATCTGGATGTCTACCCATCTG
 
. : . : . : . : . : . :
JMFN003H14+ CCTATTAGAATTGTCCATTTCTCACAATCTCAAAGCCTTTCACTATGATCCAATCCAACG
JMFF045I16+ CCTATTTGAATTGTCCATTTCTCACAATCTCAAAGCCTTTCACTATGATCCAATCCAACG
JMFF030F11+ CCTATTTGAATTGTCCATTTCTCACAATCTCAAAGCCTTTCACTATGATCCAATCCAACG
                      ____________________________________________________________
consensus CCTATTTGAATTGTCCATTTCTCACAATCTCAAAGCCTTTCACTATGATCCAATCCAACG
 
. : . : . : . : . : . :
JMFN003H14+ ATTTTCGCTAAACTTCCACTTCTTCTTTTTCTCCCACTCAACTTAACTACCAATCACAAA
JMFF045I16+ ATTTTCGCTAAACTTCCACTTCTTCTTTTTCTCCCACTCAACTTAACTACCAATCACAAA
JMFF030F11+ ATTTTCGCTAAACTTCCACTTCTTCTTTTTCTCCCACTCAACTTAACTACCAATCACAAA
                      ____________________________________________________________
consensus ATTTTCGCTAAACTTCCACTTCTTCTTTTTCTCCCACTCAACTTAACTACCAATCACAAA
 
. : . : . : . : . : . :
JMFN003H14+ ACTTCAAATGCCATATAAACAGATGCAACAGCGTGATTCGCGGCTGTTGCGTCTGAATCT
JMFF045I16+ ACTTCAAATGCCATATAAACAGATGCAACAGCGTGATTCGCGGCTGTTGCGTCTGAATCT
JMFF030F11+ ACTTCAAATGCCATATAAACAGATGCAACAGCGTGATTCGCGGCTGTTGCGTCTGAATCT
                      ____________________________________________________________
consensus ACTTCAAATGCCATATAAACAGATGCAACAGCGTGATTCGCGGCTGTTGCGTCTGAATCT
 
. : . : . : . : . : . :
JMFN003H14+ CAACCTGCTCCTCCTCCTCCTTCCGCAGATTCTTTCCGGTGAGGCGGTGGCTGCTCTGAA
JMFF045I16+ CAACCTGCTCCTCCTCCTCCTTCCGCAGATTCTTTCCGGTGAGGCGGTGGCTGCTCTGAA
JMFF030F11+ CAACCTGCTCCTCCTCCTCCTTCCGCAGATTCTTTCCGGTGAGGCGGTGGCTGCTCTGAA
                      ____________________________________________________________
consensus CAACCTGCTCCTCCTCCTCCTTCCGCAGATTCTTTCCGGTGAGGCGGTGGCTGCTCTGAA
 
. : . : . : . : . : . :
JMFN003H14+ TCGAGGGAGGCGGCGATGAGCGGTGGGTCAACGATGGAACGGTGGAACGCAGATTGAAAA
JMFF045I16+ TCGAGGGAGGCGGCGATGAGCGGTGGGTCAACGATGGAACGGTGGAACGCAGATTGAAAA
JMFF030F11+ TCGAGGGAGGCGGCGATGAGCGGTGGGTCAACGATGGAACGGTGGAACGCAGATTGAAAA
                      ____________________________________________________________
consensus TCGAGGGAGGCGGCGATGAGCGGTGGGTCAACGATGGAACGGTGGAACGCAGATTGAAAA
 
. : . : . : . : . : . :
JMFN003H14+ AAGGTTGCGAGCGAGAGCG
JMFF045I16+ AAGGTTGCGAGCGAGAGCGAAAAAACGAAAAGAAAACAAAAAACCACAAAAAAATGAAAC
JMFF030F11+ AAGGTTGCGAGCGAGAGCGAAAAAACGAAAAGAAAACAAAAAACCACAAAAAAATGAAAC
                      ____________________________________________________________
consensus AAGGTTGCGAGCGAGAGCGAAAAAACGAAAAGAAAACAAAAAACCACAAAAAAATGAAAC