Contig 011567:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029P22Sequence490011567 (2)emb|CCG20371.1|4e-53Ran GTPase activating protein 2 [Solanum tuberosum]735008254 (2)ref|XP_011090753.1|1e-59PREDICTED: RAN GTPase-activating protein 2-like isoform X1 [Sesamum indicum]
JMFF036O08Sequence579011567 (2)emb|CCG20371.1|2e-60Ran GTPase activating protein 2 [Solanum tuberosum]726008254 (2)ref|XP_011090754.1|6e-57PREDICTED: RAN GTPase-activating protein 2-like isoform X2 [Sesamum indicum] re

Alignment

This contig is upended


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JMFF036O08+                        ACTGAAACATATCTTAGTGTAAGCGTTTCCCGGCTCTTTCAAAGGCT
                      ____________________________________________________________
consensus                          ACTGAAACATATCTTAGTGTAAGCGTTTCCCGGCTCTTTCAAAGGCT
 
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JMFF036O08+           TCAAAAGCTCCTCAGCTTCTTCCGCCTCAATAAAAGCCCTTTTCCCCTTGGAGATATCAA
                      ____________________________________________________________
consensus             TCAAAAGCTCCTCAGCTTCTTCCGCCTCAATAAAAGCCCTTTTCCCCTTGGAGATATCAA
 
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JMFF036O08+           AAACGGTTTCACGGGAGACGGGAGCCGCCTTCAACTCCACAGTCTCTTTCTCCTCGGTCT
JMFF029P22+                                                             TCCTCGGTCT
                      ____________________________________________________________
consensus             AAACGGTTTCACGGGAGACGGGAGCCGCCTTCAACTCCACAGTCTCTTTCTCCTCGGTCT
 
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JMFF036O08+           TGGGCACCTTTTTCAGAGCTTCTATGATTAGCTTACTGCATTCTTTGGCATAGAGCTGCA
JMFF029P22+           TGGGCACCTTTTTCAGAGCTTCTATGATTAGCTTACTGCATTCTTTGGCATAGAGCTGCA
                      ____________________________________________________________
consensus             TGGGCACCTTTTTCAGAGCTTCTATGATTAGCTTACTGCATTCTTTGGCATAGAGCTGCA
 
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JMFF036O08+           CTGCCGAACTCCCATCACCATCGGGCTCCTTATCATAGTGATTATTCGCAACAGAAAAGG
JMFF029P22+           CTGCCGAACTCCCATCACCATCGGGCTCCTTATCATAGTGATTATTCGCAACAGAAAAGG
                      ____________________________________________________________
consensus             CTGCCGAACTCCCATCACCATCGGGCTCCTTATCATAGTGATTATTCGCAACAGAAAAGG
 
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JMFF036O08+           CAGCGTCTTCAATTTGTTTAGCTTTCTCAACAGCCTCATCCTTGCTCAGACTACCATACT
JMFF029P22+           CAGCGTCTTCAATTTGTTTAGCTTTCTCAACAGCCTCATCCTTGCTCAGACTACCATACT
                      ____________________________________________________________
consensus             CAGCGTCTTCAATTTGTTTAGCTTTCTCAACAGCCTCATCCTTGCTCAGACTACCATACT
 
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JMFF036O08+           TGCGAGTGAAAATGGTGGGGGTAGAAAGATTGTTCGTCATCCGATCCACCAAGATTTTCC
JMFF029P22+           TGCGAGTGAAAATGGTGGGGGTAGAAAGATTGTTCGTCATCCGATCCACCAAGATTTTCC
                      ____________________________________________________________
consensus             TGCGAGTGAAAATGGTGGGGGTAGAAAGATTGTTCGTCATCCGATCCACCAAGATTTTCC
 
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JMFF036O08+           TCGTGTTTTCACTAGGGGGCCACAATTTAATTGAAAATGGGCGGCGCTCAGGGCTGGGTG
JMFF029P22+           TCGTGTTTTCACTAGGGGGCCACAATTTAATTGAAAATGGGCGGCGCTCAGGGCTGGGTG
                      ____________________________________________________________
consensus             TCGTGTTTTCACTAGGGGGCCACAATTTAATTGAAAATGGGCGGCGCTCAGGGCTGGGTG
 
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JMFF036O08+           CTGTGGAATCCATTGGAACAATATAGGCAGGTGCTGTGGAATCCATTGAAACACCGTTTT
JMFF029P22+           CTGTGGAATCCATTGGAACAATATAGGCAGGTGCTGTGGAATCCATTGAAACACCGTTTT
                      ____________________________________________________________
consensus             CTGTGGAATCCATTGGAACAATATAGGCAGGTGCTGTGGAATCCATTGAAACACCGTTTT
 
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JMFF036O08+           CGGGCTTTTCCAGATTCATGTTTCTCGGGAACGGTTTGGTTTGGTGGAAGAC        
JMFF029P22+           CGGGCTTTTCCAGATTCATGTTTCTCGGGAACGGTTTGGTTTGGTGGAAGACGGCGAGCG
                      ____________________________________________________________
consensus             CGGGCTTTTCCAGATTCATGTTTCTCGGGAACGGTTTGGTTTGGTGGAAGACGGCGAGCG
 
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JMFF029P22+           AAGCAGTGATGGCTTTAGCTTTAAAAAAGAGGGAGGGAGAGTGAGAGAGAAAAAAGAAGC
                      ____________________________________________________________
consensus             AAGCAGTGATGGCTTTAGCTTTAAAAAAGAGGGAGGGAGAGTGAGAGAGAAAAAAGAAGC