| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018E10 | Sequence | 579 | 011562 (13) | ref|XP_011074118.1| | 2e-103 | PREDICTED: ras-related protein Rab7 [Sesamum indicum] | 822 | 011562 (13) | gb|KJB59527.1| | 5e-94 | hypothetical protein B456_009G259500 [Gossypium raimondii] |
| JMFF028I07 | Sequence | 505 | 011562 (13) | ref|XP_009628178.1| | 2e-83 | PREDICTED: ras-related protein Rab7 [Nicotiana tomentosiformis] | 548 | 011562 (13) | ref|XP_004290467.1| | 5e-21 | PREDICTED: ras-related protein Rab7 [Fragaria vesca subsp. vesca] |
| JMFF032E05 | Sequence | 532 | 011562 (13) | ref|XP_009628178.1| | 4e-91 | PREDICTED: ras-related protein Rab7 [Nicotiana tomentosiformis] | 718 | 011562 (13) | gb|KJB59527.1| | 4e-74 | hypothetical protein B456_009G259500 [Gossypium raimondii] |
| JMFF036K18 | Sequence | 525 | 011562 (13) | ref|XP_009628178.1| | 3e-90 | PREDICTED: ras-related protein Rab7 [Nicotiana tomentosiformis] | 756 | 011562 (13) | gb|KJB59527.1| | 7e-80 | hypothetical protein B456_009G259500 [Gossypium raimondii] |
| JMFF050B21 | Sequence | 614 | 011562 (13) | gb|KJB59527.1| | 1e-111 | hypothetical protein B456_009G259500 [Gossypium raimondii] | 512 | 011562 (13) | ref|XP_004290467.1| | 7e-15 | PREDICTED: ras-related protein Rab7 [Fragaria vesca subsp. vesca] |
| JMSF002A13 | Sequence | 242 | 011562 (13) | ref|XP_008381050.1| | 3e-21 | PREDICTED: ras-related protein Rab7 [Malus domestica] | 679 | 014940 | gb|KJB59527.1| | 2e-62 | hypothetical protein B456_009G259500 [Gossypium raimondii] |
| JMSF002J18 | Sequence | 358 | 011562 (13) | gb|ACU24093.1| | 6e-47 | unknown [Glycine max] | 762 | 011562 (13) | gb|KJB59527.1| | 3e-97 | hypothetical protein B456_009G259500 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
rJMFF050B21- ACTTAACATCAATCATATCATACAACATTC
rJMFF028I07- GTCNGAGACATTTTCCAATACTTAACATCAATCATATCATACAACATTC
rJMFF036K18- TACAACATTC
rJMFF018E10- TACAACATTC
____________________________________________________________
consensus GTCNGAGACATTTTCCAATACTTAACATCAATCATATCATACAACATTC
. : . : . : . : . : . :
rJMFF050B21- AACACAACCTGAACAACTGTTCGGTTTTTACCATTAACAAAGTTCTACAAAAAAAAGCTC
rJMFF028I07- AACACAACCTGAACAACTGTTCGGTTTTTACCATTAACAAAGTTCTACAAGAAAAAGCTC
rJMFF032E05- ACTGTTCGGTTTTTACCATTAACAAAGTTCTACAAGAAAAAGCTC
rJMFF036K18- AACACAACCTGAACAACTGTTCGGTTTTTACCATTAACAAAGTTCTACAAGAAAAAGCTC
rJMFF018E10- AACACAACCTGAACAACTGTTCGGTTTTTACCATTAACAAAGTTCTACAAGAAAAAGCTC
rJMSF002J18- AAGCTC
____________________________________________________________
consensus AACACAACCTGAACAACTGTTCGGTTTTTACCATTAACAAAGTTCTACAAGAAAAAGCTC
. : . : . : . : . : . :
rJMFF050B21- TCCCCAATTTAAAAAGCAATGTCAACCCCAAAAAGATCTATGCAAATGATCAAATACACA
rJMFF028I07- TCCCCAATTTAAGAAGCAATGTCAACCCCAAAAAGATCTATGCAAATGATCAAATACACA
rJMFF032E05- TCCCCAATTTAAGAAGCAATGTCAACCCCAAAAAGATCTATGCAAATGATCAAATACACA
rJMFF036K18- TCCCCAATTTAAGAAGCAATGTCAACCCCAAAAAGATCTATGCAAATGATCAAATACACA
rJMFF018E10- TCCCCAATTTAAGAAGCAATGTCAACCCCAAAAAGATCTATGCAAATGATCAAATACACA
rJMSF002J18- TCCCCAATTTAAGAAGCAATGTCAACCCCAAAAAGATCTATGCAAATGATCAAATACACA
____________________________________________________________
consensus TCCCCAATTTAAGAAGCAATGTCAACCCCAAAAAGATCTATGCAAATGATCAAATACACA
. : . : . : . : . : . :
rJMFF050B21- ATCATTTTCCAAATGATATGATGGCTGTGACAAATCTAAGCAAGTTCCTAACACGACAGC
rJMFF028I07- ATCATTTTCCAGATGATATGATGGCTGTGACAAATCTAAGCAAGTTCCTAACACGACAGC
rJMFF032E05- ATCATTTTCCAGATGATATGATGGCTGTGACAAATCTAAGCAAGTTCCTAACACGACAGC
rJMFF036K18- ATCATTTTCCAGATGATATGATGGCTGTGACAAATCTAAGCAAGTTCCTAACACGACAGC
rJMFF018E10- ATCATTTTCCAGATGATATGATGGCTGTGACAAATCTAAGCAAGTTCCTAACACGACAGC
rJMSF002J18- ATCATTTTCCAGATGATATGATGGCTGTGACAAATCTAAGCAAGTTCCTAACACGACAGC
____________________________________________________________
consensus ATCATTTTCCAGATGATATGATGGCTGTGACAAATCTAAGCAAGTTCCTAACACGACAGC
. : . : . : . : . : . :
rJMFF050B21- AACAACACAATACAATACAAGGCATCCAGCAAAAGCACCAAACCTCGAAAGCTTAGGGGA
rJMFF028I07- AACAACACAATACAATACAAGGCATCCAGCAAAAGCACCAAACCTCGAGAGCTTAGGGGA
rJMFF032E05- AACAACACAATACAATACAAGGCATCCAGCAAAAGCACCAAACCTCGAGAGCTTAGGGGA
rJMFF036K18- AACAACACAATACAATACAAGGCATCCAGCAAAAGCACCAAACCTCGAGAGCTTAGGGGA
rJMFF018E10- AACAACACAATACAATACAAGGCATCCAGCAAAAGCACCAAACCTCGAGAGCTTAGGGGA
rJMSF002J18- AACAACACAATACAATACAAGGCATCCAGCAAAAGCACCAAACCTCGAGAGCTTAGGGGA
____________________________________________________________
consensus AACAACACAATACAATACAAGGCATCCAGCAAAAGCACCAAACCTCGAGAGCTTAGGGGA
. : . : . : . : . : . :
rJMFF050B21- CAAGGACAAAAAGAGCATTGAATAAGGATACTAATCATACTATTGCAGGAAATATTAGGC
rJMFF028I07- CAAGGACAAAAAGAGCATTGAATAAGGATACTAATCATACTATTGCAGGAAATATTAGGC
rJMFF032E05- CAAGGACAAAAAGAGCATTGAATAAGGATACTAATCATACTATTGCAGGAAATATTAGGC
rJMFF036K18- CAAGGACAAAAAGAGCATTGAATAAGGATACTAATCATACTATTGCAGGAAATATTAGGC
rJMFF018E10- CAAGGACAAAAAGAGCATTGAATAAGGATACTAATCATACTATTGCAGGAAATATTAGGC
rJMSF002J18- CAAGGACAAAAAGAGCATTGAATAAGGATACTAATCATACTATTGCAGGAAATATTAGGC
____________________________________________________________
consensus CAAGGACAAAAAGAGCATTGAATAAGGATACTAATCATACTATTGCAGGAAATATTAGGC
. : . : . : . : . : . :
rJMFF050B21- AACAAGACAAGAAAGAACAATTTCAAATTAATTGCCATTTTCTGATTAGCATGCGCAACC
rJMFF028I07- AACAAGACAAGAAAGAACAATTTCAAATTAATTGTCATTTTCTGATTAGCATGCGCAACC
rJMFF032E05- AACAAGACAAGAAAGAACAATTTCAAATTAATTGTCATTTTCTGATTAGCATGCGCAACC
rJMFF036K18- AACAAGACAAGAAAGAACAATTTCAAATTAATTGTCATTTTCTGATTAGCATGCGCAACC
rJMFF018E10- AACAAGACAAGAAAGAACAATTTCAAATTAATTGTCATTTTCTGATTAGCATGCGCAACC
rJMSF002J18- AACAAGACAAGAAAGAACAATTTCAAATTAATTGTCATTTTCTGATTAGCATGCGCAACC
____________________________________________________________
consensus AACAAGACAAGAAAGAACAATTTCAAATTAATTGTCATTTTCTGATTAGCATGCGCAACC
. : . : . : . : . : . :
rJMFF050B21- CCCTCTAGTCTCAAATTCTGGTATGGCATCAGGAATTCCCTGCAAGAATATATCCTGCTC
rJMFF028I07- CCCTCTAGTCTCAGATTCTGGTATGGCATCAGGAATTCCCTGCAAGTATATATCCTGCTC
rJMFF032E05- CCCTCTAGTCTCAGATTCTGGTATGGCATCAGGAATTCCCTGCAAGTATATATCCTGCTC
rJMFF036K18- CCCTCTAGTCTCAGATTCTGGTATGGCATCAGGAATTCCCTGCAAGTATATATCCTGCTC
rJMFF018E10- CCCTCTAGTCTCAGATTCTGGTATGGCATCAGGAATTCCCTGCAAGTATATATCCTGCTC
rJMSF002J18- CCCTCTAGTCTCAGATTCTGGTATGGCATCAGGAATTCCCTGCAAGTATATATCCTGCTC
____________________________________________________________
consensus CCCTCTAGTCTCAGATTCTGGTATGGCATCAGGAATTCCCTGCAAGTATATATCCTGCTC
. : . : . : . : . : . :
rJMFF050B21- ATGTGTGTTGGCTAATGCGGTTTTTGCAATACACAAGAATGCAGCATCAACATTTA
rJMFF028I07- ATGTGTGTTGGCTAATGCGGTTTTTGCAATACACAAGAATGCAGCATCAACATTTATGTC
rJMFF032E05- ATGTGTGTTGGCTAATGCGGTTTTTGCAATACACAAGAATGCAGCATCAACATTTATGTC
rJMFF036K18- ATGTGTGTTGGCTAATGCGGTTTTTGCAATACACAAGAATGCAGCATCAACATTTATGTC
rJMFF018E10- ATGTGTGTTGGCTAATGCGGTTTTTGCAATACACAAGAATGCAGCATCAACATTTATGTC
rJMSF002J18- ATGTGTGTTGGCTAATGCGGTTTTTGCAATACACAAGAATGCAGCATCAACATTTATGTC
JMFF050B21+ ATGCAGCATCAACATTTATGTC
____________________________________________________________
consensus ATGTGTGTTGGCTAATGCGGTTTTTGCAATACACAAGAATGCAGCATCAACATTTATGTC
. : . : . : . : . : . :
rJMFF028I07- CTCTTTAGCTGATGTCTCA
rJMFF032E05- CTCTTTAGCTGATGTCTCAAAATAAGGTATAGTCCCTTTGGAAGAGCACCATTCCTTGGC
rJMFF036K18- CTCTTTAGCTGATGTCTCAAAATAAGGTATAGTCCCTTTGGAAGAGCACCATTCCTTGGC
rJMFF018E10- CTCTTTAGCTGATGTCTCAAAATAAGGTATAGTCCCTTTGGAAGAGCACCATTCCTTGGC
rJMSF002J18- CTCTTTAGCTGATGTCTCAAAATAAGGTATAGTCCCTTTGGAAGAGCACCATTCCTTGGC
JMFF050B21+ CTCTTTAGCTGATGTCTCAAAATAAGGTATAGTCCCTTTGGAAGAGCACCATTCCTTGGC
JMFF018E10+ GTCTCAAAATAAGGTATAGTCCCTTTGGAAGAGCACCATTCCTTGGC
____________________________________________________________
consensus CTCTTTAGCTGATGTCTCAAAATAAGGTATAGTCCCTTTGGAAGAGCACCATTCCTTGGC
. : . : . : . : . : . :
rJMFF032E05- TTTCTTTTCAGAAACCACTCGGCTATTCCCACCGTCTACATCAATCTTGTTTCCCAACAG
rJMFF036K18- TTTCTTTTCAGAAACCACTCGGCTATTCCCACCGTCTACATCAATCTTGTTTCCCAACAG
rJMFF018E10- TTTCTTTTCAGAAACCACTCGGCTATTCCCACCGTCTACATCAATCTTGTTTCCCAACAG
rJMSF002J18- TTTCTTTTCAGAAACCACTCGGCTATTCCCACCGTCTACATCAATCTTGTTTCCCAACAG
JMFF050B21+ TTTCTTTTCAGAAACCACTCGGCTATTCCCACCGTCTACATCAATCTTGTTTCCCAACAG
JMFF036K18+ TCAGAAACCACTCGGCTATTCCCACCGTCTACATCAATCTTGTTTCCCAACAG
JMFF018E10+ TTTCTTTTCAGAAACCACTCGGCTATTCCCACCGTCTACATCAATCTTGTTTCCCAACAG
JMFF032E05+ TTTTCAGAAACCACTCGGCTATTCCCACCGTCTACATCAATCTTGTTTCCCAACAG
JMFF028I07+ CTACATCAATCTTGTTTCCCAACAG
____________________________________________________________
consensus TTTCTTTTCAGAAACCACTCGGCTATTCCCACCGTCTACATCAATCTTGTTTCCCAACAG
. : . : . : . : . : . :
rJMFF032E05- TATGAAAGGAAATCCTGTTGGATCAGCTGGGTTAGCCTGTTTGAGAAATTCATCATGCCA
rJMFF036K18- TATGAAAGGAAATCCTGTTGGATCAGCTGGGTTAGCCTGTTTGAGAAATTCATCATGCCA
rJMFF018E10- TATGAAAGGAAATCCTGTTGGATCAGCTGGGTTAGCCTGTTTGAGAAATTCATCATGCCA
rJMSF002J18- TATGAAAGGAAATCCTGTTGGATCAGCTGGGTTAGCCTGTTTGAGAAATTCATCATGCCA
JMFF050B21+ TATGAAAGGAAATCCTGTTGGATCAGCTGGGTTAGCCTGTTTGAGAAATTCATCATGCCA
JMFF036K18+ TATGAAAGGAAATCCTGTTGGATCAGCTGGGTTAGCCTGTTTGAGAAATTCATCATGCCA
JMFF018E10+ TATGAAAGGAAATCCTGTTGGATCAGCTGGGTTAGCCTGTTTGAGAAATTCATCATGCCA
JMFF032E05+ TATGAAAGGAAATCCTGTTGGATCAGCTGGGTTAGCCTGTTTGAGAAATTCATCATGCCA
JMFF028I07+ TATGAAAGGAAATCCTGTTGGATCAGCTGGGTTAGCCTGTTTGAGAAATTCATCATGCCA
____________________________________________________________
consensus TATGAAAGGAAATCCTGTTGGATCAGCTGGGTTAGCCTGTTTGAGAAATTCATCATGCCA
. : . : . : . : . : . :
rJMFF032E05- GTTGTCAAGGTTATCAAAGGACCGCATTACATTGACATCATACACCATAACACAACAATC
rJMFF036K18- GTTGTCAAGGTTATCAAAGGACCGCATTACATTGACATCATACACCATAACACAACAATC
rJMFF018E10- GTTGTCAAGGTTATCAAAGGACCGCATTACATTGACATCATACACCATAACACAACAATC
rJMSF002J18- GTTGTCAAGGTTATCAAAGGACCGCATTACATTGACATCATACACCATAACACAACAATC
JMFF050B21+ GTTGTCAAGGTTATCAAAGGACCGCATTACATTGACATCATACACCATAACACAACAATC
JMFF036K18+ GTTGTCAAGGTTATCAAAGGACCGCATTACATTGACATCATACACCATAACACAACAATC
JMFF018E10+ GTTGTCAAGGTTATCAAAGGACCGCATTACATTGACATCATACACCATAACACAACAATC
JMFF032E05+ GTTGTCAAGGTTATCAAAGGACCGCATTACATTGACATCATACACCATAACACAACAATC
JMFF028I07+ GTTGTCAAGGTTATCAAAGGACCGCATTACATTGACATCATACACCATAACACAACAATC
____________________________________________________________
consensus GTTGTCAAGGTTATCAAAGGACCGCATTACATTGACATCATACACCATAACACAACAATC
. : . : . : . : . : . :
rJMFF032E05- AGC
rJMFF036K18- AGCCCCCCTGTAAAATGCAACTCC
rJMFF018E10- AGCCCCCCTGTAAAATGCAACTCCNAGGCTCTGAAATCTCTCCTGCCCAGCCGTGTCCCA
rJMSF002J18- AGCCCCCCTGTAAAATGCAACTCCNAGGCTCTGAAATCTCTCCTGCCCAGCCGTGTCCCA
JMFF050B21+ AGCCCCCCTGTAAAATGCAACTCCAAGGCTCTGAAATCTCTCCTGCCCAGCCGTGTCCCA
JMFF036K18+ AGCCCCCCTGTAAAATGCAACTCCAAGGCTCTGAAATCTCTCCTGCCCAGCCGTGTCCCA
JMSF002J18+ CCCCCTGTAAAATGCAACTCCAAGGCTCTGAAATCTCTCCTGCCCAGCCGTGTCCCA
JMFF018E10+ AGCCCCCCTGTAAAATGCAACTCCAAGGCTCTGAAATCTCTCCTGCCCAGCCGTGTCCCA
JMFF032E05+ AGCCCCCCTGTAAAATGCAACTCCAAGGCTCTGAAATCTCTCCTGCCCAGCCGTGTCCCA
JMFF028I07+ AGCCCCCCTGTAAAATGCAACTCCAAGGCTCTGAAATCTCTCCTGCCCAGCCGTGTCCCA
____________________________________________________________
consensus AGCCCCCCTGTAAAATGCAACTCCAAGGCTCTGAAATCTCTCCTGCCCAGCCGTGTCCCA
. : . : . : . : . : . :
rJMFF018E10- TATTTGTANAGTAACATGCTGGTCATC
rJMSF002J18- TATTTGTAGAGTAACATGCTGGTCATCGATTTGAAG
JMFF050B21+ TATTTGTAGAGTAACATGCTGGTCATCGATTTGAAGCTCCTTTGTTACAAAATCAGCTCC
JMFF036K18+ TATTTGTAGAGTAACATGCTGGTCATCGATTTGAAGCTCCTTTGTTACAAAATCAGCTCC
JMSF002J18+ TATTTGTAGAGTAACATGCTGGTCATCGATTTGAAGCTCCTTTGTTACAAAATCAGCTCC
JMFF018E10+ TATTTGTAGAGTAACATGCTGGTCATCGATTTGAAGCTCCTTTGTTACAAAATCAGCTCC
JMSF002A13+ ATCAGCTCC
JMFF032E05+ TATTTGTAGAGTAACATGCTGGTCATCGATTTGAAGCTCCTTTGTTACAAAATCAGCTCC
JMFF028I07+ TATTTGTAGAGTAACATGCTGGTCATCGATTTGAAGCTCCTTTGTTACAAAATCAGCTCC
____________________________________________________________
consensus TATTTGTAGAGTAACATGCTGGTCATCGATTTGAAGCTCCTTTGTTACAAAATCAGCTCC
. : . : . : . : . : . :
JMFF050B21+ AATAGTGGCTTTGTACTGCTGACTGAACTTCTTATGCACATATTGATTCATCAATGACGT
JMFF036K18+ AATAGTGGCTTTGTACTGCTGACTGAACTTCTTATGCACATATTGATTCATCAATGACGT
JMSF002J18+ AATAGTGGCTTTGTACTGCTGACTGAACTTCTTATGCACATATTGATTCATCAATGACGT
JMFF018E10+ AATAGTGGCTTTGTACTGCTGACTGAACTTCTTATGCACATATTGATTCATCAATGACGT
JMSF002A13+ AATAGTGGCTTTGTACTGCTGACTGAACTTCTTATGCACATATTGATTCATCAATGACGT
JMFF032E05+ AATAGTGGCTTTGTACTGCTGACTGAACTTCTTATGCACATATTGATTCATCAATGACGT
JMFF028I07+ AATAGTGGCTTTGTACTGCTGACTGAACTTCTTATGCACATATTGATTCATCAATGACGT
____________________________________________________________
consensus AATAGTGGCTTTGTACTGCTGACTGAACTTCTTATGCACATATTGATTCATCAATGACGT
. : . : . : . : . : . :
JMFF050B21+ TTTACCAACCCCACTGTCGCCGAGGACGATGACCTTGAGCAAAGTTCGCCTACGCAAAGA
JMFF036K18+ TTTACCAACCCCACTGTCGCCGAGGACGATGACCTTGAGCAAAGTTCGCCTACGCAAAGA
JMSF002J18+ TTTACCAACCCCACTGTCGCCGAGGACGATGACCTTGAGCAA
JMFF018E10+ TTTACCAACCCCACTGTCGCCGAGGACGATGACCTTGAGCAAAGTTCGCCTACGCAAAGA
JMSF002A13+ TTTACCAACCCCACTGTCGCCGAGGACGATGACCTTGAGCAAAGTTCGCCTACGCAAAGA
JMFF032E05+ TTTACCAACCCCACTGTCGCCGAGGACGATGACCTTGAGCAAAGTTCGCCTACGCAAAGA
JMFF028I07+ TTTACCAACCCCACTGTCGCCGAGGACGATGACCTTGAGCAAAGTTCGCCTACGCAAAGA
____________________________________________________________
consensus TTTACCAACCCCACTGTCGCCGAGGACGATGACCTTGAGCAAAGTTCGCCTACGCAAAGA
. : . : . : . : . : . :
JMFF050B21+ CATGACGACAGTTGAGTGAAATCTCTACTACGAAATTTTTTCAACGAATTGTGGACTGAG
JMFF036K18+ CATGACGACAGTTGAGTGAAATCTCTACTACGAAATTTTTTCAACGAATTGTGGACTGAG
JMFF018E10+ CATGACGACAGTTGAGTGAAATCTCTACTACGAAATTTTTTCAACGAATTGTGGACTGAG
JMSF002A13+ CATGACGACAGTTGAGTGAAATCTCTACTACGAAATTTTTTCAACGAATTGTGGACTGAG
JMFF032E05+ CATGACGACAGTTGAGTGAAATCTCTACTACGAAATTTTTTCAACGAATTGTGGACTGAG
JMFF028I07+ CATGACGACAGTTGAGTGAAATCTCTACTACGAAATTTTTTCAACGAATTGTGGACTGAG
____________________________________________________________
consensus CATGACGACAGTTGAGTGAAATCTCTACTACGAAATTTTTTCAACGAATTGTGGACTGAG
. : . : . : . : . : . :
JMFF050B21+ CAGAGAAAAGGAGAGACTACAGAAATTGGGGCGCCAATTTAGATCCTTGCTC
JMFF036K18+ CAGAGAAAAGGAGAGACTACAGAAATTGGGGCGCCAATTTAGATCCTTGCTC
JMFF018E10+ CAGAGAAAAGGAGAGACTACAGAAATTGGGGCGCCAATTTAGATCCTTGCTC
JMSF002A13+ CAGAGAAAAGGAGAGACTACAGAAATTGGGGCGCCAATTTAGATCCTTGCTC
JMFF032E05+ CAGAGAAAAGGAGAGACTACAGAAATTGGGGCGCCAATTTAGATCCTTGCTC
JMFF028I07+ CAGAGAAAAGGAGAGACTACAGAAATTGGGGCGCCAATTTAGATCCTTGCTCAAGTAAAC
____________________________________________________________
consensus CAGAGAAAAGGAGAGACTACAGAAATTGGGGCGCCAATTTAGATCCTTGCTCAAGTAAAC