Contig 011558:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027D17Sequence509011558 (4)ref|XP_004249871.1|214PREDICTED: uncharacterized protein LOC101263658 [Solanum lycopersicum]678011558 (4)ref|XP_009587888.1|266PREDICTED: uncharacterized protein LOC104085538 [Nicotiana tomentosiformis]
JMSF001M20Sequence316011558 (4)ref|XP_004249871.1|136PREDICTED: uncharacterized protein LOC101263658 [Solanum lycopersicum]684011558 (4)ref|XP_004249871.1|297PREDICTED: uncharacterized protein LOC101263658 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF027D17-                     TACGAAGTATACAGATTATTCTGCTACATTAACAAAATTGATTAAGCCC
rJMSF001M20-                                  GATTATTCTGCTACATTAACAAAATTGATTAAGCCC
                      ____________________________________________________________
consensus                        TACGAAGTATACAGATTATTCTGCTACATTAACAAAATTGATTAAGCCC
 
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rJMFF027D17-          CTAATAACAAATTAACAAATTGTACCCAAGAAAAAAAAAGAAAAGAAAGAGAAATCCCTA
rJMSF001M20-          CTAATAACAAATTAACAAATTGTACCCAAG-AAAAAAAAGAAAAGAAAGAGAAATCCCTA
                      ____________________________________________________________
consensus             CTAATAACAAATTAACAAATTGTACCCAAGAAAAAAAAAGAAAAGAAAGAGAAATCCCTA
 
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rJMFF027D17-          GAAGCAAAGGAGAACAACAGAGGAAGAGATCATGAAAGCATAGATGAAGATCAAGAATCC
rJMSF001M20-          GAAGCAAAGGAGAACAACAGAGGAAGAGATCATGAAAGCATAGATGAAGATCAAGAATCC
                      ____________________________________________________________
consensus             GAAGCAAAGGAGAACAACAGAGGAAGAGATCATGAAAGCATAGATGAAGATCAAGAATCC
 
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rJMFF027D17-          AAAATGCAAAGCCCAATTCCTCTTGAACTTACCAAAGTAACTCTCCGGCGGTTCTTGATA
rJMSF001M20-          AAAATGCAAAGCCCAATTCCTCTTGAACTTACCAAAGTAACTCTCCGGCGGTTCTTGATA
                      ____________________________________________________________
consensus             AAAATGCAAAGCCCAATTCCTCTTGAACTTACCAAAGTAACTCTCCGGCGGTTCTTGATA
 
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rJMFF027D17-          ATGTATCTCAAACTCCTCGGCCACCTCGTCCTCGCCGCCGCCGCTGCTCATCCGCATCTT
rJMSF001M20-          ATGTATCTCAAACTCCTCGGCCACCTCGTCCTCGCCGCCGCCGCTGCTCATCCGCATCTT
JMFF027D17+                                        CCTCGCCGCCGCCGCTGCTCATCCGCATCTT
                      ____________________________________________________________
consensus             ATGTATCTCAAACTCCTCGGCCACCTCGTCCTCGCCGCCGCCGCTGCTCATCCGCATCTT
 
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rJMFF027D17-          CAGCCGCCGCAGGCGCTCGGTGGCGAGGCCCAGCGTCAGCTTGTGGCAGCGCCGCTGGTA
rJMSF001M20-          CAGCCGCCGCAGGCGCTCGGTGGCGAGGCCCAGCGTCAGCTTGTGGCAGCGCCGCTGGTA
JMFF027D17+           CAGCCGCCGCAGGCGCTCGGTGGCGAGGCCCAGCGTCAGCTTGTGGCAGCGCCGCTGGTA
                      ____________________________________________________________
consensus             CAGCCGCCGCAGGCGCTCGGTGGCGAGGCCCAGCGTCAGCTTGTGGCAGCGCCGCTGGTA
 
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rJMFF027D17-          CTTGAACCCATTGATGCACCTGAGGGTCTGGGCAACTGACACGTAGAAGATGAGGTGGGC
rJMSF001M20-          CTTGAACCCATTGATGCACCTGAGGGTCTGGGCAACTGACACGTAGAAGATGAGGTGGGC
JMSF001M20+                                            AACTGACACGTAGAAGATGAGGTGGNC
JMFF027D17+           CTTGAACCCATTGATGCACCTGAGGGTCTGGGCAACTGACACGTAGAAGATGAGGTGGGC
                      ____________________________________________________________
consensus             CTTGAACCCATTGATGCACCTGAGGGTCTGGGCAACTGACACGTAGAAGATGAGGTGGGC
 
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rJMFF027D17-          CATGGAGAGGAGCCCGATGGGGACCCAGCAATGGCGGCACTGCAGCCTCGAAGACTGGGC
rJMSF001M20-          CATGGAGAGGAGCCCGATGGGGACCCAGCAATGGCGGCACTGCAGCCTCGAAGACTGGGC
JMSF001M20+           CATGGAGAGGAGCCCGATGGGGACCCAGCAATGGCGGCACTGCAGCCTCGAAGACTGGGC
JMFF027D17+           CATGGAGAGGAGCCCGATGGGGACCCAGCAATGGCGGCACTGCAGCCTCGAAGACTGGGC
                      ____________________________________________________________
consensus             CATGGAGAGGAGCCCGATGGGGACCCAGCAATGGCGGCACTGCAGCCTCGAAGACTGGGC
 
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rJMFF027D17-          TTGCCCCAGGAAAACCAGGGACAGGAAGAGGAAGAAGAGCTGGAACATCTTCCAGAGCTC
rJMSF001M20-          TTGCCCCAGGAAAACCAGGGACAGGAAGAGGAAGAAGAGCTGGAACATCTTCCAGAGCTC
JMSF001M20+           TTGCCCCAGGAAAACCAGGGACAGGAAGAGGAAGAAGAGCTGGAACATCTTCCAGAGCTC
JMFF027D17+           TTGCCCCAGGAAAACCAGGGACAGGAAGAGGAAGAAGAGCTGGAACATCTTCCAGAGCTC
                      ____________________________________________________________
consensus             TTGCCCCAGGAAAACCAGGGACAGGAAGAGGAAGAAGAGCTGGAACATCTTCCAGAGCTC
 
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rJMFF027D17-          CTTCTTCTGGAGGTCAACTGCGCGTTTCTTCTCGAGGGTCTTCTCGAAATGGAGCTGGAT
rJMSF001M20-          CTTCTTCTGGAGGTCAACTGCGCGTTTCTTCTCGAGGGTCTTCTCGAAATGGAGCTGGAT
JMSF001M20+           CTTCTTCTGGAGGTCAACTGCGCGTTTCTTCTCGAGGGTCTTCTCGAAATGGAGCTGGAT
JMFF027D17+           CTTCTTCTGGAGGTCAACTGCGCGTTTCTTCTCGAGGGTCTTCTCGAAATGGAGCTGGAT
                      ____________________________________________________________
consensus             CTTCTTCTGGAGGTCAACTGCGCGTTTCTTCTCGAGGGTCTTCTCGAAATGGAGCTGGAT
 
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rJMFF027D17-          GATGGGTGTTGAGGGCCTGCAGGGCGGCCTCGTGGTGGATCANACTGGCCGGGTGGGGCG
rJMSF001M20-          GAT-GGTGTTGAGGGCCTGCAGGGCGGCCTCGTGGTGGATCAGACTGGCCGGGT-GGGCG
JMSF001M20+           GAT-GGTGTTGAGGGCCTGCAGGGCGGCCTCGTGGTGGATCAGACTGGCCGGGT-GGGCG
JMFF027D17+           GAT-GGTGTTGAGGGCCTGCAGGGCGGCCTCGTGGTGGATCAGACTGGCCGGGT-GGGCG
                      ____________________________________________________________
consensus             GAT-GGTGTTGAGGGCCTGCAGGGCGGCCTCGTGGTGGATCAGACTGGCCGGGT-GGGCG
 
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rJMFF027D17-          GCGGTGGCTGCCTCGTAGTCCGCCATTGG                               
rJMSF001M20-          GCGGTGGCTGCCTCGTAGTCCGCCATTGGAGAGAGGATGTGAGGATGGAT          
JMSF001M20+           GCGGTGGCTGCCTCGTAGTCCGCCATTGGAGAGAGGATGTGAGGATGGAT          
JMFF027D17+           GCGGTGGCTGCCTCGTAGTCCGCCATTGGAGAGAGGATGTGAGGATGGATGGAGGGGTTT
                      ____________________________________________________________
consensus             GCGGTGGCTGCCTCGTAGTCCGCCATTGGAGAGAGGATGTGAGGATGGATGGAGGGGTTT
 
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JMFF027D17+           GGGATTGGGTTTCTCTTGACGAGACTGTTGTTGACTGGTTAGACCCACACCCATCGGATC
                      ____________________________________________________________
consensus             GGGATTGGGTTTCTCTTGACGAGACTGTTGTTGACTGGTTAGACCCACACCCATCGGATC