Contig 011529:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003I01Sequence491011529 (12)ref|XP_009799351.1|2e-19PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris]467011529 (12)ref|XP_009799351.1|1e-19PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris]
JMFF011F23Sequence416011529 (12)ref|XP_009799351.1|9e-20PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris]
JMFF019H21Sequence496011529 (12)ref|XP_009799351.1|2e-19PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris]471011529 (12)ref|XP_009799351.1|2e-19PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris]
JMFN003E13Sequence486011529 (12)ref|XP_009799351.1|2e-19PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris]
JMFN013P24Sequence535011529 (12)ref|XP_009799351.1|3e-19PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris]
JMFN042O03Sequence484011529 (12)ref|XP_009799351.1|2e-19PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris]
JMFN044B17Sequence510011529 (12)ref|XP_009799351.1|7e-18PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris]
JMFN044E08Sequence289011529 (12)gb|AEW24432.1|5e-07late embryogenesis abundant protein 3L-1 [Camellia sinensis]
JMFS023E11Sequence485011529 (12)ref|XP_009799351.1|2e-19PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris]
JMFS134D04Sequence497011529 (12)ref|XP_009799351.1|2e-19PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN044E08+                                      ACATAAAAGAATAGAATTTTGAACAAAAATATG
JMFN013P24+                                                          GAACAAAAATATG
                      ____________________________________________________________
consensus                                        ACATAAAAGAATAGAATTTTGAACAAAAATATG
 
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JMFN044E08+           AATCATCACATAAAAGAGATTAACTCATCAGCTCATATTATAATTTTATAAATTCTATAG
JMFN044B17+                       AAAGAGATTAACTCATCAGCTCATATTATAATTTTATAAATTCTATAG
JMFS134D04+                       AAAGAGATTAACTCATCAGCTCATATTATAATTTTATAAATTCTATAG
JMFN003E13+                                               ATTATAATTTTATAAATTCTATAG
JMFS023E11+                                               ATTATAATTTTATAAATTCTATAG
JMFN013P24+           AATCATCACATAAAAGAGATTAACTCATCAGCTCATATTATAATTTTATAAATTCTATAG
JMFN042O03+                                                  ATAATTTTATAAATTCTATAG
JMFF003I01+                                                                  TATAG
JMFF019H21+                                                               TTCTATAG
                      ____________________________________________________________
consensus             AATCATCACATAAAAGAGATTAACTCATCAGCTCATATTATAATTTTATAAATTCTATAG
 
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JMFN044E08+           AACTGGAATATTTTCCCTTTTCTTTAATATAACTTCAAGAATCCATCATGGGCGGATCCA
JMFN044B17+           AACTGGAATATTTTCCCTTTTCTTTAATATAACTTCAAGAATCCATCATGGGCGGATCCA
JMFS134D04+           AACTGGAATATTTTCCCTTTTCTTTAATATAACTTCAAGAATCCATCATGGGCGGATCCA
JMFN003E13+           AACTGGAATATTTTCCCTTTTCTTTAATATAACTTCAAGAATCCATCATGGGCGGATCCA
JMFS023E11+           AACTGGAATATTTTCCCTTTTCTTTAATATAACTTCAAGAATCCATCATGGGCGGATCCA
JMFN013P24+           AACTGGAATATTTTCCCTTTTCTTTAATATAACTTCAAGAATCCATCATGGGCGGATCCA
JMFN042O03+           AACTGGAATATTTTCCCTTTTCTTTAATATAACTTCAAGAATCCATCATGGGCGGATCCA
JMFF003I01+           AACTGGAATATTTTCCCTTTTCTTTAATATAACTTCAAGAATCCATCATGGGCGGATCCA
rJMFF019H21-                    TTTTCCCTTTTCTTTAATATAACTTCAAGAATCCATCATGGGCGGATCCA
rJMFF003I01-                                 TTTATATAACTTCAAGAATCCATCATGGGCGGATCCA
JMFF019H21+           AACTGGAATATTTTCCCTTTTCTTTAATATAACTTCAAGAATCCATCATGGGCGGATCCA
                      ____________________________________________________________
consensus             AACTGGAATATTTTCCCTTTTCTTTAATATAACTTCAAGAATCCATCATGGGCGGATCCA
 
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JMFN044E08+           AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
JMFN044B17+           AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
JMFS134D04+           AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
JMFN003E13+           AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
JMFS023E11+           AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
JMFN013P24+           AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
JMFN042O03+           AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
JMFF003I01+           AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
rJMFF019H21-          AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
rJMFF003I01-          AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
JMFF011F23+            ACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
JMFF019H21+           AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
                      ____________________________________________________________
consensus             AACACGAGTAATCTCAAGCAATCAAAAATACTTTTCAGTTTCGTCTAATTTTGTTGTTGA
 
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JMFN044E08+           GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
JMFN044B17+           GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
JMFS134D04+           GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
JMFN003E13+           GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
JMFS023E11+           GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
JMFN013P24+           GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
JMFN042O03+           GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
JMFF003I01+           GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
rJMFF019H21-          GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
rJMFF003I01-          GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
JMFF011F23+           GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
JMFF019H21+           GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
                      ____________________________________________________________
consensus             GCAGAGCCGCTCTCATCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGT
 
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JMFN044E08+           ACCCGGTGACGGGGTC                                            
JMFN044B17+           ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTATCCAGCCTTCT
JMFS134D04+           ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCT
JMFN003E13+           ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCT
JMFS023E11+           ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCT
JMFN013P24+           ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCT
JMFN042O03+           ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCT
JMFF003I01+           ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCT
rJMFF019H21-          ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCT
rJMFF003I01-          ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCT
JMFF011F23+           ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCT
JMFF019H21+           ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCT
                      ____________________________________________________________
consensus             ACCCGGTGACGGGGTCCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCT
 
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JMFN044B17+           TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
JMFS134D04+           TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
JMFN003E13+           TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
JMFS023E11+           TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
JMFN013P24+           TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
JMFN042O03+           TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
JMFF003I01+           TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
rJMFF019H21-          TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
rJMFF003I01-          TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
JMFF011F23+           TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
JMFF019H21+           TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
                      ____________________________________________________________
consensus             TCATCACCCCGCCGCCGGACACTTTTCCCTGCGACGCCGCCGCCGCGGCGTACCCGCGCC
 
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JMFN044B17+           TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
JMFS134D04+           TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
JMFN003E13+           TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
JMFS023E11+           TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
JMFN013P24+           TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
JMFN042O03+           TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
JMFF003I01+           TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
rJMFF019H21-          TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
rJMFF003I01-          TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
JMFF011F23+           TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
JMFF019H21+           TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
                      ____________________________________________________________
consensus             TCACAGCGACGGAGACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAG
 
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JMFN044B17+           AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
JMFS134D04+           AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
JMFN003E13+           AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
JMFS023E11+           AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
JMFN013P24+           AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
JMFN042O03+           AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
JMFF003I01+           AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
rJMFF019H21-          AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
rJMFF003I01-          AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
JMFF011F23+           AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
JMFF019H21+           AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
                      ____________________________________________________________
consensus             AGCGAGCCATTTCGTCGTCGATCGATGGAAGGCAACAATTCACAACACTTGCGTAATTGA
 
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JMFN044B17+           GAAGAAAACAAAAGCTAATTATAGAAAGTATGTGAAGTGTTT                  
JMFS134D04+           GAAGAAAACAAAAGCTAATTATAGAAAG                                
JMFN003E13+           GAAGAAAACAAAAGCTAATTATAGAAAGTATGTGAAGTGTTT                  
JMFS023E11+           GAAGAAAACAAAAGCTAATTATAGAAAGTATGTGAAGTGTT                   
JMFN013P24+           GAAGAAAACAAAAGCTAATTATAGAAAGTATGTGAAGTGTTT                  
JMFN042O03+           GAAGAAAACAAAAGCTAATTATAGAAAGTATGTGAAGTGTTTG                 
JMFF003I01+           GAAGAAAACAAAAGCTAATTATAGAAAGTATGTGAAGTGTTTGGGCTATGGAAAGA    
rJMFF019H21-          GAAGAAAACAAAAGCTAATTATAGAAAGTATGTGAAGTGTTTGGGCTATGGAAAGA    
rJMFF003I01-          GAAGAAAACAAAAGCTAATTATAGAAAGTATGTGAAGTGTTTGGGCTATGGAAAGA    
JMFF011F23+           GAAGAAAACAAAAGCTAATTATAGAAAGTATGTGAAGTGTTTGGGCTATGGAAAGA    
JMFF019H21+           GAAGAAAACAAAAGCTAATTATAGAAAGTATGTGAAGTGTTTGGGCTATGGAAAGACGAT
                      ____________________________________________________________
consensus             GAAGAAAACAAAAGCTAATTATAGAAAGTATGTGAAGTGTTTGGGCTATGGAAAGACGAT