Contig 011498:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011P16Sequence564011498 (3)ref|XP_006351268.1|3e-74PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Solanum tuberosum]791001063 (2)ref|XP_009618296.1|1e-102PREDICTED: inosine-5'-monophosphate dehydrogenase 2 {ECO:0000255|HAMAP-Rule:MF_0
JMSF007H09Sequence343011498 (3)ref|XP_006379655.1|4e-39hypothetical protein POPTR_0008s082301g, partial [Populus trichocarpa] gb|ERP574771000235 (181)ref|XP_008456347.1|4e-169PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo]
JMSF033B19Sequence669011498 (3)ref|XP_006351268.1|8e-102PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF033B19+ CGCCATCCACTTCGCTCACCAATGGCACAAATTGAAGCTTTTG
                      ____________________________________________________________
consensus CGCCATCCACTTCGCTCACCAATGGCACAAATTGAAGCTTTTG
 
. : . : . : . : . : . :
JMSF033B19+ TGCCTCCAAATACCCAGCTACATCCTCAAAATTGTAGCTCGAGGGCAATGACACCGGCGA
                      ____________________________________________________________
consensus TGCCTCCAAATACCCAGCTACATCCTCAAAATTGTAGCTCGAGGGCAATGACACCGGCGA
 
. : . : . : . : . : . :
JMSF033B19+ CTTCGTCATGTAATCTGAAACTCTAGCTTCCTTGTTACTCAAAGACTCCCAGGAAGACCT
JMFF011P16+ ACTCAAAGACTCCCAGGAAGACCT
                      ____________________________________________________________
consensus CTTCGTCATGTAATCTGAAACTCTAGCTTCCTTGTTACTCAAAGACTCCCAGGAAGACCT
 
. : . : . : . : . : . :
JMSF033B19+ CGACACCACACCCAACAGTTTCGACCTCTGAGTTCCCGAATCGGTAACAAAAACGCAGGG
JMFF011P16+ CGACACCACACCCAACAGTTTCGACCTCTGAGTTCCCGAATCGGTAACAAAAACGCAGGG
                      ____________________________________________________________
consensus CGACACCACACCCAACAGTTTCGACCTCTGAGTTCCCGAATCGGTAACAAAAACGCAGGG
 
. : . : . : . : . : . :
JMSF033B19+ AGCCGAGCCGAACTCATCCGCGGAGTGGATAGAATCGCCAGGGGATACAAACACCAAGTC
JMFF011P16+ AGCCGAGCCGAACTCATCCGCGGAGTGGATAGAATCGCCAGGGGATACAAACACCAAGTC
                      ____________________________________________________________
consensus AGCCGAGCCGAACTCATCCGCGGAGTGGATAGAATCGCCAGGGGATACAAACACCAAGTC
 
. : . : . : . : . : . :
JMSF007H09+ GGAGGCTTGTTGCGAAGG
JMSF033B19+ GGCAGTAAACGGGATCTTGTGAGACTTGGCGGAGCGGACAATGGAGGCTTGTTGCGAAGG
JMFF011P16+ GGCAGTAAACGGGATCTTGTGAGACTTGGCGGAGCGGACAATGGAGGCTTGTTGCGAAGG
                      ____________________________________________________________
consensus GGCAGTAAACGGGATCTTGTGAGACTTGGCGGAGCGGACAATGGAGGCTTGTTGCGAAGG
 
. : . : . : . : . : . :
JMSF007H09+ CGTGGTGTTGGAATGGACGATACCAATCCCACCGAGAGCTGCCATGGCAGCTGCCATTGA
JMSF033B19+ CGTGGTGTTGGAATGGACGATACCAATCCCACCGAGAGCTGCCATGGCAGCTGCCATTGA
JMFF011P16+ CGTGGTGTTGGAATGGACGATACCAATCCCACCGAGAGCTGCCATGGCAGCTGCCATTGA
                      ____________________________________________________________
consensus CGTGGTGTTGGAATGGACGATACCAATCCCACCGAGAGCTGCCATGGCAGCTGCCATTGA
 
. : . : . : . : . : . :
JMSF007H09+ GGACTCAGTAACTGTATCCATCGGCGAAGCCACGCACGGTATGGACAGGGAAACATTGCG
JMSF033B19+ GGACTCAGTAACTGTATCCATCGGCGAAGCCACGCACGGTATGGACAGGGAAACATTGCG
JMFF011P16+ GGACTCAGTAACTGTATCCATCGGCGAAGCCACGCACGGTATGGACAGGGAAACATTGCG
                      ____________________________________________________________
consensus GGACTCAGTAACTGTATCCATCGGCGAAGCCACGCACGGTATGGACAGGGAAACATTGCG
 
. : . : . : . : . : . :
JMSF007H09+ GCTGAGCTTCGTGGTTAGGTCGACGGCGTCGGCCGGAAAATCTATGTATCCTGGAAGAAA
JMSF033B19+ GCTGAGCTTCGTGGTTAGGTCGACGGCGTCGGCCGGAAAATCTATGTATCCTGGAAGAAA
JMFF011P16+ GCTGAGCTTCGTGGTTAGGTCGACGGCGTCGGCCGGAAAATCTATGTATCCTGGAAGAAA
                      ____________________________________________________________
consensus GCTGAGCTTCGTGGTTAGGTCGACGGCGTCGGCCGGAAAATCTATGTATCCTGGAAGAAA
 
. : . : . : . : . : . :
JMSF007H09+ TATAACATCGTCATAGGTATAAGAATAACCTTGATTAAATAATTTAACCGCCGGAAATCC
JMSF033B19+ TATAACATCGTCATAGGTATAAGAATAACCTTGATTAAATAATTTAACCGCCGGAAATCC
JMFF011P16+ TATAACATCGTCATAGGTATAAGAATAACCTTGATTAAATAATTTAACCGCCGGAAATCC
                      ____________________________________________________________
consensus TATAACATCGTCATAGGTATAAGAATAACCTTGATTAAATAATTTAACCGCCGGAAATCC
 
. : . : . : . : . : . :
JMSF007H09+ ATCGTCAAACTGAGCTGCTCCGTCCGCCATTTGAGCCGGTATTTCTTAGTAGGAAAATGC
JMSF033B19+ ATCGTCAAACTGAGCTGCTCCGTCCGCCATTTGAGCCGGTATTTCTTAGTAGGAAAATGC
JMFF011P16+ ATCGTCAAACTGAGCTGCTCCGTCCGCCATTTGAGCCGGTATTTCTTAGTAGGAAAATGC
                      ____________________________________________________________
consensus ATCGTCAAACTGAGCTGCTCCGTCCGCCATTTGAGCCGGTATTTCTTAGTAGGAAAATGC
 
. : . : . : . : . : . :
JMSF007H09+ GAATGAGGATATCTATGAATACTC
JMSF033B19+ GAATGAGGATATCTATGAATACTC
JMFF011P16+ GAATGAGGATATCTATGAATACTCGAATACAGAAAAACAGGGTTTTTGCGGTTTAAAGGT
                      ____________________________________________________________
consensus GAATGAGGATATCTATGAATACTCGAATACAGAAAAACAGGGTTTTTGCGGTTTAAAGGT