Contig 011482:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007M13Sequence374011482 (3)746023312ref|XP_009758366.1|321PREDICTED: uncharacterized protein LOC104211066 [Nicotiana sylvestris]
JMFF042G07Sequence646011482 (3)ref|XP_009758366.1|82.4PREDICTED: uncharacterized protein LOC104211066 [Nicotiana sylvestris]
JMFS115G02Sequence569011482 (3)ref|XP_009758366.1|67.4PREDICTED: uncharacterized protein LOC104211066 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF042G07+                     GACTTCCCGATCTCGAGATCAACGTGTCGGGATTCACAACAAAATGACCG
                      ____________________________________________________________
consensus                       GACTTCCCGATCTCGAGATCAACGTGTCGGGATTCACAACAAAATGACCG
 
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JMFS115G02+                                  CTTCCTCCATAGCAGCCTAGAGAGAGGCGACCCGCTT
JMFF042G07+           CTGCTGCTACCACCACTACTCTTCTTCCTCCATAGCAGCCTAGAGAGAGGCGACCCGCTT
                      ____________________________________________________________
consensus             CTGCTGCTACCACCACTACTCTTCTTCCTCCATAGCAGCCTAGAGAGAGGCGACCCGCTT
 
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JMFS115G02+           CTCGCCGGACTCTTCGCCCTTGATCGCGCCGGCGATAAGCTCCTAACCACTTCTTCCTTT
JMFF042G07+           CTCGCCGGACTCTTCGCCCTTGATCGCGCCGGCGATAAGCTCCTAACCACTTCTTCCTTT
                      ____________________________________________________________
consensus             CTCGCCGGACTCTTCGCCCTTGATCGCGCCGGCGATAAGCTCCTAACCACTTCTTCCTTT
 
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JMFS115G02+           AACGCCGAGAAGAACCCTTGCTTCCGCTCCATTTCCCAAACCACCCTAACTCTCTCTCCT
JMFF042G07+           AACGCCGAGAAGAACCCTTGCTTCCGCTCCATTTCCCAAACCACCCTAACTCTCTCTCCT
                      ____________________________________________________________
consensus             AACGCCGAGAAGAACCCTTGCTTCCGCTCCATTTCCCAAACCACCCTAACTCTCTCTCCT
 
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JMFS115G02+           TCTCTCTCTCTAACCAAATCAATATAAACACATAACGCTACTACGCTACCTCAGACACAC
JMFF042G07+           TCTCTCTCTCTAACCAAATCAATATAAACACATAACGCTACTACGCTACCTCAGACACAC
JMFF007M13+                                                         TACCTCAGACACAC
                      ____________________________________________________________
consensus             TCTCTCTCTCTAACCAAATCAATATAAACACATAACGCTACTACGCTACCTCAGACACAC
 
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JMFS115G02+           CGAACAAGAATGCGACTAAAGGCCTGCCATGGCCGGAACCATAACCTCGCACTAAAAGCT
JMFF042G07+           CGAACAAGAATGCGACTAAAGGCCTGCCATGGCCGGAACCATAACCTCGCACTAAAAGCT
JMFF007M13+           CGAACAAGAATGCGACTAAAGGCCTGCCATGGCCGGAACCATAACCTCGCACTAAAAGCT
                      ____________________________________________________________
consensus             CGAACAAGAATGCGACTAAAGGCCTGCCATGGCCGGAACCATAACCTCGCACTAAAAGCT
 
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JMFS115G02+           AAACCCACTCAAAAACAAACCCAGAACCGGAACTAAAATCTGGGTTCACTCGATTCCAAT
JMFF042G07+           AAACCCACTCAAAAACAAACCCAGAACCGGAACTAAAATCTGGGTTCACTCGATTCCAAT
JMFF007M13+           AAACCCACTCAAAAACAAACCCAGAACCGGAACTAAAATCTGGGTTCACTCGATTCCAAT
                      ____________________________________________________________
consensus             AAACCCACTCAAAAACAAACCCAGAACCGGAACTAAAATCTGGGTTCACTCGATTCCAAT
 
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JMFS115G02+           GCCACTGCGATTATCAACAGAGAACAGAGACCCCAATACACGAATAATGCCCCTACACAA
JMFF042G07+           GCCACTGCGATTATCAACAGAGAACAGAGACCCCAATACACGAATAATGCCCCTACACAA
JMFF007M13+           GCCACTGCGATTATCAACAGAGAACAGAGACCCCAATACACGAATAATGCCCCTACACAA
                      ____________________________________________________________
consensus             GCCACTGCGATTATCAACAGAGAACAGAGACCCCAATACACGAATAATGCCCCTACACAA
 
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JMFS115G02+           CAACAACAACACTGTTCTCTCAGCAAAGAAACCTCTGCAAGCGCGAAAGACTGGAAGAAA
JMFF042G07+           CAACAACAACACTGTTCTCTCAGCAAAGAAACCTCTGCAAGCGCGAAAGACTGGAAGAAA
JMFF007M13+           CAACAACAACACTGTTCTCTCAGCAAAGAAACCTCTGCAAGCGCGAAAGACTGGAAGAAA
                      ____________________________________________________________
consensus             CAACAACAACACTGTTCTCTCAGCAAAGAAACCTCTGCAAGCGCGAAAGACTGGAAGAAA
 
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JMFS115G02+           GAGAAAGAAGATGAAGAAAGAAATTTCCAGTAGAGTGGTGTCAGCTGCTACTTTGCGAGC
JMFF042G07+           GAGAAAGAAGATGAAGAAAGAAATTTCCAGTAGAGTGGTGTCAGCTGCTACTTTGCGAGC
JMFF007M13+           GAGAAAGAAGATGAAGAAAGAAATTTCCAGTAGAGTGGTGTCAGCTGCTACTTTGCGAGC
                      ____________________________________________________________
consensus             GAGAAAGAAGATGAAGAAAGAAATTTCCAGTAGAGTGGTGTCAGCTGCTACTTTGCGAGC
 
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JMFS115G02+           GAGAGAGAGAGAGAGAGTGAAAGAAAAGGAGGAGAGAGAGAGGATAGTGTGG        
JMFF042G07+           GAGAGAGAGAGAGAGAGTGAAAGAAAAGGAGGAGAGAGAGAGGATAGTGTGG        
JMFF007M13+           GAGAGAGAGAGAGAGAGTGAAAGAAAAGGAGGAGAGAGAGAGGATAGTGTGGTGCCCCCT
                      ____________________________________________________________
consensus             GAGAGAGAGAGAGAGAGTGAAAGAAAAGGAGGAGAGAGAGAGGATAGTGTGGTGCCCCCT