Contig 011479:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006L24Sequence544011479 (2)ref|XP_011038586.1|2e-31PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101771020146ref|XP_010049702.1|2e-27PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101
JMFF012N02Sequence483011479 (2)ref|XP_007013194.1|1e-24Serine/threonine-protein kinase PBS1, putative [Theobroma cacao] gb|EOY30813.1| 803019083ref|XP_002522015.1|8e-45conserved hypothetical protein [Ricinus communis] gb|EEF40419.1| conserved hypot

Alignment

This contig is upended


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JMFF006L24+                                                                AAGCTTC
                      ____________________________________________________________
consensus                                                                  AAGCTTC
 
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JMFF012N02+           CATTTCCGTCAACTTCACATACCACCAAGTTTCCAGAGTCCAACAGCGTGGCACCCACGT
JMFF006L24+           CATTTCCGTCAACTTCACGTACCACCAAGTTTCCAGAATCCAACAGCGTGGCACCCACGT
                      ____________________________________________________________
consensus             CATTTCCGTCAACTTCACGTACCACCAAGTTTCCAGAGTCCAACAGCGTGGCACCCACGT
 
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JMFF012N02+           TGTTTCCGGACATTGTGGAAACATTCGACACTGTAATCATCCCTCCAACGTACGAAATCT
JMFF006L24+           TGTTTCCGGACATTATGGAAACATTGGACACTGTAATCATCCCTCCAACGTACGAAATCT
                      ____________________________________________________________
consensus             TGTTTCCGGACATTGTGGAAACATTGGACACTGTAATCATCCCTCCAACGTACGAAATCT
 
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JMFF012N02+           TGAGTTTGCCGTGAGCGTCGATGATGAGTGAACCGGATGAGTCTGGGAGCGGGGAATCAC
JMFF006L24+           TGAGTTTGCCGTCAGCGTCGATGATGAGTGAACCGGATGAGTCTGGGAGCGGGGAATCAC
                      ____________________________________________________________
consensus             TGAGTTTGCCGTGAGCGTCGATGATGAGTGAACCGGATGAGTCTGGGAGCGGGGAATCAC
 
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JMFF012N02+           GGTTGGCAATCCAGACCGGCTGGTTTGGCATGTTGGTGTACCATATTCCTAGATAACGGT
JMFF006L24+           GGTTGGCAACCCAGACCGGCTCGTTTGGGATCTTGTTGTACCATATTCCTAGATAACGGT
                      ____________________________________________________________
consensus             GGTTGGCAATCCAGACCGGCTGGTTTGGGATGTTGTTGTACCATATTCCTAGATAACGGT
 
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JMFF012N02+           TCACTGGGTTGATTGGACCGGAGTAGCCGGCAGAAATGCTAAAGAAACCAAGCTTGAAAA
JMFF006L24+           CCTCTGTGTTGATTGGACCGGAGTAGCTGTCAGAAATGCTAAAGAAACCGAGCTTGAAAA
                      ____________________________________________________________
consensus             TCTCTGTGTTGATTGGACCGGAGTAGCTGTCAGAAATGCTAAAGAAACCGAGCTTGAAAA
 
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JMFF012N02+           TGTCCTTAGCAGAAGTCAAATGTTGCCGGGCTCGGATTTTGGCACCTTGCATGAGTGTGT
JMFF006L24+           TGGCCTTAGCAGAAGTCAAATGTTCCCAGTCTCGGATATTGGCACCCTGCATCAGTGTGT
                      ____________________________________________________________
consensus             TGTCCTTAGCAGAAGTCAAATGTTGCCGGTCTCGGATTTTGGCACCTTGCATGAGTGTGT
 
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JMFF012N02+           CTGGCCGATCTGCGGCTAAACTAAGGTAAGACGAAAATCCCATGTCGAGAAATGAGATAA
JMFF006L24+           CTGAC---TCTGCACCTACACTAACGTAAGACGAAAATCCCATATGGAGAAATGGGATTA
                      ____________________________________________________________
consensus             CTGGCCGATCTGCGGCTACACTAAGGTAAGACGAAAATCCCATGTGGAGAAATGGGATTA
 
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JMFF012N02+           GTAGAATGAGAAGAAAGATTTTGGAAGTATCCATTTAGCTT                   
JMFF006L24+           GTAGAATGAGAAGAAAGATTTTGGAGGAATCCATTTAGCTTTGCTTAGGGTAAAAGAAAA
                      ____________________________________________________________
consensus             GTAGAATGAGAAGAAAGATTTTGGAGGTATCCATTTAGCTTTGCTTAGGGTAAAAGAAAA
 
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JMFF006L24+           TGATAATATTACGTTTTTATAGACTTTTACATCCAACTTTTTACAATGCTCTCCATCCAA
                      ____________________________________________________________
consensus             TGATAATATTACGTTTTTATAGACTTTTACATCCAACTTTTTACAATGCTCTCCATCCAA