Contig 011477:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006I23Sequence565011477 (5)ref|XP_006364174.1|125PREDICTED: uncharacterized protein LOC102585793 [Solanum tuberosum]801011477 (5)ref|XP_004243490.1|124PREDICTED: uncharacterized protein LOC101260358 [Solanum lycopersicum]
JMFF016H02Sequence553011477 (5)ref|XP_006364174.1|157PREDICTED: uncharacterized protein LOC102585793 [Solanum tuberosum]819011477 (5)ref|XP_004243490.1|154PREDICTED: uncharacterized protein LOC101260358 [Solanum lycopersicum]
JMFN008K07Sequence612011477 (5)ref|XP_004243490.1|104PREDICTED: uncharacterized protein LOC101260358 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF016H02- CTGAAGTCTTTTAGTGGAAATGTTTTG
                      ____________________________________________________________
consensus CTGAAGTCTTTTAGTGGAAATGTTTTG
 
. : . : . : . : . : . :
rJMFF016H02- AATCAACATTGGTATAAATACTACATGGCAAGGCTTTGCCTTGCACCAAAACAGGAAATC
JMFN008K07+ ACATTGGTATAAATACTACATGGCAAGGCTTTGCCTTGCACCAAAACAGGAAATC
rJMFF006I23- ACATTGGTATAAATACTACATGGCAAGGCTTTGCCTTGCACCAAAACAGGAAATC
                      ____________________________________________________________
consensus AATCAACATTGGTATAAATACTACATGGCAAGGCTTTGCCTTGCACCAAAACAGGAAATC
 
. : . : . : . : . : . :
rJMFF016H02- TCATATGGAACAATAGATGATGAAGCACAACTTTCTCTATACTACTATTGCAATCCAACA
JMFN008K07+ TCATATGGAACAATAGATGATGAAGCACAACTTTCTCTATACTACTATTGCAATCCAACA
rJMFF006I23- TCATATGGAACAATAGATGATGAAGCACAACTTTCTCTATACTACTATTGCAATCCAACA
                      ____________________________________________________________
consensus TCATATGGAACAATAGATGATGAAGCACAACTTTCTCTATACTACTATTGCAATCCAACA
 
. : . : . : . : . : . :
rJMFF016H02- GAATTGAGACCATAACGGCACCAGTTGGATTGCCTTGGGATATTACAAGTGATATTGGGG
JMFN008K07+ GAATTGAGACCATAACGGCACCAGTTGGATTGCCTTGGGATATTACAAGTGATATTGGGG
rJMFF006I23- GAATTGAGACCATAACGGCACCAGTTGGATTGCCTTGGGATATTACAAGTGATATTGGGG
                      ____________________________________________________________
consensus GAATTGAGACCATAACGGCACCAGTTGGATTGCCTTGGGATATTACAAGTGATATTGGGG
 
. : . : . : . : . : . :
rJMFF016H02- CGTGGCCTTTAGATTTCATTGAGACTTTACCGCCTTGTCTTTCCATCCCTTCTGGCGTGC
JMFN008K07+ CGTGGCCTTTAGATTTCATTGAGACTTTACCGCCTTGTCTTTCCATCCCTTCTGGCGTGC
rJMFF006I23- CGTGGCCTTTAGATTTCATTGAGACTTTACCGCCTTGTCTTTCCATCCCTTCTGGCGTGC
                      ____________________________________________________________
consensus CGTGGCCTTTAGATTTCATTGAGACTTTACCGCCTTGTCTTTCCATCCCTTCTGGCGTGC
 
. : . : . : . : . : . :
rJMFF016H02- CCTCGACTCCCACAAAGCAGTCAGTTTCTTCTGTGCCAACAACGCTACATCTGCTTTTTC
JMFN008K07+ CCTCGACTCCCACAAAGCAGTCAGTTTCTTCTGTGCCAACAACGCTACATCTGCTTTTTC
rJMFF006I23- CCTCGACTCCCACAAAGCAGTCAGTTTCTTCTGTGCCAACAACGCTACATCTGCTTTTTC
JMFF016H02+ CAACGCTACATCTGCTTTTTC
JMFF006I23+ TGTGCCAACAACGCTACATCTGCTTTTTC
                      ____________________________________________________________
consensus CCTCGACTCCCACAAAGCAGTCAGTTTCTTCTGTGCCAACAACGCTACATCTGCTTTTTC
 
. : . : . : . : . : . :
rJMFF016H02- TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
JMFN008K07+ TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
rJMFF006I23- TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
JMFF016H02+ TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
JMFF006I23+ TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
                      ____________________________________________________________
consensus TCTAGCCTCCTCGCAAGTCTCCATCCCAGAATTGCACTTGTCCGCTTCTTTCATATACTG
 
. : . : . : . : . : . :
rJMFF016H02- AGATGTCAGCTTTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
JMFN008K07+ AGATGTCAGC-TTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
rJMFF006I23- AGATGTCAGC-TTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
JMFF016H02+ AGATGTCAGCTTTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
JMFF006I23+ AGATGTCAGC-TTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
                      ____________________________________________________________
consensus AGATGTCAGC-TTTTTTTGCCTCTAGAAGTGCAATATCAGCTTTGTGCTGATTCTCTGAG
 
. : . : . : . : . : . :
rJMFF016H02- GCTTCAGCTTCTCGGGATTTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
JMFN008K07+ GCTTCAGCTTCTCGGGATTTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
rJMFF006I23- GCTTCAGCTTCTCGGGATCTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
JMFF016H02+ GCTTCAGCTTCTCGGGATTTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
JMFF006I23+ GCTTCAGCTTCTCGGGATCTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
                      ____________________________________________________________
consensus GCTTCAGCTTCTCGGGATTTTAATTCCTCGGACAACAGTTCTGCAAAGTTCTTCTCTGTG
 
. : . : . : . : . : . :
rJMFF016H02- TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCT
JMFN008K07+ TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCT
rJMFF006I23- TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCT
JMFF016H02+ TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCN
JMFF006I23+ TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCN
                      ____________________________________________________________
consensus TCTTCACCCACCTCGGGATCATGCTTTCCACAATCTGTAAAAGAAGCGTTGCTCAATCCT
 
. : . : . : . : . : . :
rJMFF016H02- TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
JMFN008K07+ TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
rJMFF006I23- TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
JMFF016H02+ TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
JMFF006I23+ TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
                      ____________________________________________________________
consensus TGAGGAATAGAGAGAAGGGGCTGGGAATTGCAGTCACAGTTGCAAGGAGGACAAGAATAA
 
. : . : . : . : . : . :
rJMFF016H02- TAGGATGAAGAAGAACGGGTCACAGCTGCTATGCCTTCCTTGAGGTGCCAGTACAATGGT
JMFN008K07+ TAGGATGAAGAA
rJMFF006I23- TAGGATGAAGAAGAACGGGTCACAGCTGCTATGCCTTCCTTGAGGTGCCAGTACAATGGT
JMFF016H02+ TAGGATGAAGAAGAACGGGTCACAGCTGCTATGCCTTCCNTGAGGTGCCAGTACAATGGT
JMFF006I23+ TAGGATGAAGAAGAACGGGTCACAGCTGCTATGCCTTCCTTGAGGTGCCAGTACAATGGT
                      ____________________________________________________________
consensus TAGGATGAAGAAGAACGGGTCACAGCTGCTATGCCTTCCTTGAGGTGCCAGTACAATGGT
 
. : . : . : . : . : . :
rJMFF016H02- GGACCCANAATGTAGCCGGCCAAGCACACCGCCATCACCCCAAGCAGCGCCTTCACCACC
rJMFF006I23- GGACCCAGAATGTAGCCGGCCAAGCACACCGCCATCACCCCAAGCAGCGCCTTCACCACC
JMFF016H02+ GGACCCAGAATGTAGCCGGCCAAGCACACCGCCATCACCCCAAGCAGCGCCTTCACCACC
JMFF006I23+ GGACCCAGAATGTAGCCGGCCAAGCACACCGCCATCACCCCAAGCAGCGCCTTCACCACC
                      ____________________________________________________________
consensus GGACCCAGAATGTAGCCGGCCAAGCACACCGCCATCACCCCAAGCAGCGCCTTCACCACC
 
. : . : . : . : . : . :
rJMFF016H02- CTCTGTCCACATCGTTGGTTCACCGCCATTCTCTCTCTCTCTCTCTCCCCTCTCCCTCTT
rJMFF006I23- CTCTGTCCACATCGTTGGTTCACCGCCATTCTCTCTCTCTCTCTCT-CCCTCTCCCTCTT
JMFF016H02+ CTCTGTCCACATCGTTGGTTCACCGCCATTCTCTCTCTCTCTCTCT-CCCTCTCCCTCTT
JMFF006I23+ CTCTGTCCACATCGTTGGTTCACCGCCATTCTCTCTCTCTCTCTCT-CCCTCTCCCTCTT
                      ____________________________________________________________
consensus CTCTGTCCACATCGTTGGTTCACCGCCATTCTCTCTCTCTCTCTCT-CCCTCTCCCTCTT
 
. : . : . : . : . : . :
rJMFF016H02- TCTTTCTTTCTC
rJMFF006I23- TCTTTCTTTCTC
JMFF016H02+ TCTTTCTTTCTCTCTCTCTCTCTTTCTCTTTCTCTGTACTCGATCTGCCGACT
JMFF006I23+ TCTTTCTTT--CTCTCTCTCTCTTTCTCTTTCTCTGTACTCGATCTGCCGACTGGAGACT
                      ____________________________________________________________
consensus TCTTTCTTTCTCTCTCTCTCTCTTTCTCTTTCTCTGTACTCGATCTGCCGACTGGAGACT