Contig 011453:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP016E02Sequence121011453 (3)
JMFF025H13Sequence564013259 (25)ref|XP_009785673.1|2e-66PREDICTED: PHD finger protein ING1 isoform X2 [Nicotiana sylvestris]792011453 (3)ref|XP_004247811.1|2e-89PREDICTED: PHD finger protein ING1 [Solanum lycopersicum]
JMSF009L16Sequence358013259 (25)ref|XP_009609788.1|2e-41PREDICTED: PHD finger protein ING1-like, partial [Nicotiana tomentosiformis]740011453 (3)ref|XP_006589054.1|3e-43PREDICTED: PHD finger protein ING1-like isoform X2 [Glycine max]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF025H13+ CTA
                      ____________________________________________________________
consensus CTA
 
. : . : . : . : . : . :
rJMFF025H13+ GAAGTAGAGGATATGAAGCAACGCATTAAGAGTGGCAATATTGCATCAGACTCATCACTT
                      ____________________________________________________________
consensus GAAGTAGAGGATATGAAGCAACGCATTAAGAGTGGCAATATTGCATCAGACTCATCACTT
 
. : . : . : . : . : . :
rJMFF025H13+ ATAAAGTTCTCAGATGATGCATTGGATGAACAAAAGCATGCCATCAGGATTGCTGACGAG
                      ____________________________________________________________
consensus ATAAAGTTCTCAGATGATGCATTGGATGAACAAAAGCATGCCATCAGGATTGCTGACGAG
 
. : . : . : . : . : . :
rJMFF025H13+ AAAGTTGCATTAGCTATTCAGGCATATGATCTAGTAGATACTCATATTCAACAGCTTGAT
                      ____________________________________________________________
consensus AAAGTTGCATTAGCTATTCAGGCATATGATCTAGTAGATACTCATATTCAACAGCTTGAT
 
. : . : . : . : . : . :
rJMSF009L16+ AGTTGCAGAGAGAGAAAATGCAGTA
rJMFF025H13+ CAGTACTTGAAAAAATTTGATGAGGAGCTCCGTAGAGTTGCAGAGAGAGAAAATGCAGTA
                      ____________________________________________________________
consensus CAGTACTTGAAAAAATTTGATGAGGAGCTCCGTAGAGTTGCAGAGAGAGAAAATGCAGTA
 
. : . : . : . : . : . :
rJMSF009L16+ GCCACAGGTTCAACTACTTCAAATGTTGACAACAATGTGAAATCTGGAAGATCTGGTGAT
rJMFF025H13+ GCCACAGGTTCAACTACTTCAAATGTTGACAACAATGTGAAATCTGGAAGATCTGGTGAT
                      ____________________________________________________________
consensus GCCACAGGTTCAACTACTTCAAATGTTGACAACAATGTGAAATCTGGAAGATCTGGTGAT
 
. : . : . : . : . : . :
rJMSF009L16+ AGTAGCAAAGGGGGCCGTAAAAAGACTCGTCTTGCAACAGCAACACCCGCAGCTAACCCA
rJMFF025H13+ AGTAGCAAAGGGGGCCGTAAAAAGACTCGTCTTGCAACAGCAACACCCGCAGCTAACCCA
                      ____________________________________________________________
consensus AGTAGCAAAGGGGGCCGTAAAAAGACTCGTCTTGCAACAGCAACACCCGCAGCTAACCCA
 
. : . : . : . : . : . :
rJMSF009L16+ ACCGGTATGGATTTGGATCTACCTGTTGATCCAAATGAGCCAACATATTGCTTCTGCAAC
rJMFF025H13+ ACCGGTATGGATTTGGATCTACCTGTTGATCCAAATGAGCCAACATATTGCTTCTGCAAC
                      ____________________________________________________________
consensus ACCGGTATGGATTTGGATCTACCTGTTGATCCAAATGAGCCAACATATTGCTTCTGCAAC
 
. : . : . : . : . : . :
rJMSF009L16+ CAAGTCAGCTACGGTGAAATGGTTGCATGTGACAATCCAAACTGCAAGATAGAATGGTTC
rJMFF025H13+ CAAGTCAGCTACGGTGAAATGGTTGCATGTGACAATCCAAACTGCAAGATAGAATGGTTC
                      ____________________________________________________________
consensus CAAGTCAGCTACGGTGAAATGGTTGCATGTGACAATCCAAACTGCAAGATAGAATGGTTC
 
. : . : . : . : . : . :
rJMSF009L16+ CACTATGGTTGCGTTGGCCTTAAAGAGCAGCCTAAGGGTAAATGGTACTGTTCTGATTGT
rJMFF025H13+ CACTATGGTTGCGTTGGCCTTAAAGAGCAGCCTAAGGGTAAATGGTACTGTTCTGATTGT
                      ____________________________________________________________
consensus CACTATGGTTGCGTTGGCCTTAAAGAGCAGCCTAAGGGTAAATGGTACTGTTCTGATTGT
 
. : . : . : . : . : . :
rJMSF009L16+ GCTGGAAAGCGCGGGCGTAAGAAAGGCAAGTAATAAAAGTGTGCGCAGAGGAATTGTGCC
rJMFF025H13+ GCTGGAAAGCGCGGGCGTAAGAAAGGCAAGTAATAAAAGTGTGCGCAGAGAAATTGTGCC
                      ____________________________________________________________
consensus GCTGGAAAGCGCGGGCGTAAGAAAGGCAAGTAATAAAAGTGTGCGCAGAGGAATTGTGCC
 
. : . : . : . : . : . :
rJMSF009L16+ ATTTCAGTTCTTATTGTCGGTAGACATGGAGTAACTTTGTGTATATTATTTATTGCTTCG
rJMFF025H13+ ATTTCAGTTCTTATTGTCGGTAGACATGGAGTAACTTTGTGTGTATTATTTATTGCTTCG
                      ____________________________________________________________
consensus ATTTCAGTTCTTATTGTCGGTAGACATGGAGTAACTTTGTGTGTATTATTTATTGCTTCG
 
. : . : . : . : . : . :
rJMSF009L16+ GTTTTAATCTCTTTGTTGCTCCCTCTGTATCTTTATCTTTATGGTGTCACATAATATCTG
rJMFF025H13+ GTTTTAATCTCTTTGTTGCTCCCTCTGTATCTTTATCTTTATGGTGTCACATAATATCTG
rJMCP016E02- G
                      ____________________________________________________________
consensus GTTTTAATCTCTTTGTTGCTCCCTCTGTATCTTTATCTTTATGGTGTCACATAATATCTG
 
. : . : . : . : . : . :
rJMSF009L16+ TAAGAGGTTATGTTAATGTGTAGTAGTTTT
rJMFF025H13+ TAAGAGGTTATGTTAATGTGTAGTAGTTTTTGTAAGAGAAGGTTTAGT
rJMCP016E02- TAAGAGGTTATGTTAATGTGTAGTAGTTTTTGTAAGAGAAGGTTTAGTTGAAAACATGAA
                      ____________________________________________________________
consensus TAAGAGGTTATGTTAATGTGTAGTAGTTTTTGTAAGAGAAGGTTTAGTTGAAAACATGAA
 
. : . : . : . : . : . :
rJMCP016E02- ATGAAGCACCCATATTTGTATTAACTATTGTTGCCCCTAATGTTGTATTTGAGTTTTCTC
                      ____________________________________________________________
consensus ATGAAGCACCCATATTTGTATTAACTATTGTTGCCCCTAATGTTGTATTTGAGTTTTCTC