Contig 011452:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP009F08Sequence623011452 (4)ref|XP_009627300.1|246PREDICTED: uncharacterized protein LOC104117877 [Nicotiana tomentosiformis]
JMCP010H06Sequence271011452 (4)ref|XP_009627300.1|117PREDICTED: uncharacterized protein LOC104117877 [Nicotiana tomentosiformis]
JMFN018D04Sequence478011452 (4)ref|XP_009627300.1|100PREDICTED: uncharacterized protein LOC104117877 [Nicotiana tomentosiformis]
JMSF025F17Sequence657006328 (3)ref|XP_006354871.1|7e-81PREDICTED: uncharacterized protein LOC102593823 isoform X1 [Solanum tuberosum]765011452 (4)ref|XP_009627300.1|275PREDICTED: uncharacterized protein LOC104117877 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN018D04+ GGATGACAAAGCCAAAGCCAAGAAGCATAATTGCATTGCAGACACGAGA
rJMSF025F17- A
                      ____________________________________________________________
consensus GGATGACAAAGCCAAAGCCAAGAAGCATAATTGCATTGCAGACACGAGA
 
. : . : . : . : . : . :
JMFN018D04+ GTGAACTCACAAGCAAAATCGGAAATCTAATAAAATATTACAAT-GTACTATCAATTACA
rJMSF025F17- GTGAACTCACAAGCAAAATCGGAAATCTAATAAAATATTACAATGGTACTATCAATTACA
                      ____________________________________________________________
consensus GTGAACTCACAAGCAAAATCGGAAATCTAATAAAATATTACAATGGTACTATCAATTACA
 
. : . : . : . : . : . :
JMFN018D04+ TAGTTTACATGATCAATCGTGGCAGAGTGACTTGATATGGTTAGACATCATATAATCACA
rJMSF025F17- TAGTTTACATGATCAATCGTGGCAGAGTGACTTGATATGGTTAGACATCATATAATCACA
                      ____________________________________________________________
consensus TAGTTTACATGATCAATCGTGGCAGAGTGACTTGATATGGTTAGACATCATATAATCACA
 
. : . : . : . : . : . :
JMFN018D04+ TATGAACAAAGTTGAACCCTCAGAGAGAATCAGAATGCAACACAGAAACACTGACCTAAA
rJMSF025F17- TATGAACAAAGTTGAACCCTCAGAGAGAATCAGAATGCAACACAGAAACACTGACCTAAA
                      ____________________________________________________________
consensus TATGAACAAAGTTGAACCCTCAGAGAGAATCAGAATGCAACACAGAAACACTGACCTAAA
 
. : . : . : . : . : . :
JMFN018D04+ CAAGTTACGCAATAATCATCAAGGCTTCAAGTCTTCAACAACCAGGTATATCATCATCCT
rJMSF025F17- CAAGTTACGCAATAATCATCAAGGCTTCAAGTCTTCAACAACCAGGTATATCATCATCCT
                      ____________________________________________________________
consensus CAAGTTACGCAATAATCATCAAGGCTTCAAGTCTTCAACAACCAGGTATATCATCATCCT
 
. : . : . : . : . : . :
JMFN018D04+ CAGAACTAAAACACGTGGCATGTAAAACAGCCGCTCAAGGAGCTGGTTTGGCGAGTCCTG
rJMSF025F17- CAGAACTAAAACACGTGGCATGTAAAACAGCCGCTCAAGGAGCTGGTTTGGCGAGTCCTG
                      ____________________________________________________________
consensus CAGAACTAAAACACGTGGCATGTAAAACAGCCGCTCAAGGAGCTGGTTTGGCGAGTCCTG
 
. : . : . : . : . : . :
JMFN018D04+ CGAAAGGATAAGGCTCTCTGGGGATTCCTCATAGCTTCATGACCCTGGCCAGCCAGCATT
rJMSF025F17- CGAAAGGATAAGGCTCTCTGGGGATTCCTCATAGCTTCATGACCCTGGCCAGCCAGCATT
                      ____________________________________________________________
consensus CGAAAGGATAAGGCTCTCTGGGGATTCCTCATAGCTTCATGACCCTGGCCAGCCAGCATT
 
. : . : . : . : . : . :
JMFN018D04+ GAGCTTCTCATTTCTTGTGCCTTTTTCTGTGCAGATCTCAATTTGTTCATTATCTTGTCC
rJMSF025F17- GAGCTTCTCATTTCTTGTGCCTTTTTCTGTGCAGATCTCAATTTGTTCATTATCTTGTCC
                      ____________________________________________________________
consensus GAGCTTCTCATTTCTTGTGCCTTTTTCTGTGCAGATCTCAATTTGTTCATTATCTTGTCC
 
. : . : . : . : . : . :
JMFN018D04+ ATGGAGGATG
rJMSF025F17- ATGGAGGATGATCTCTTTTTCTCCAGCTTCATCTCAAGTTTCCGGATTGCTGCCTCAGCT
                      ____________________________________________________________
consensus ATGGAGGATGATCTCTTTTTCTCCAGCTTCATCTCAAGTTTCCGGATTGCTGCCTCAGCT
 
. : . : . : . : . : . :
rJMSF025F17- TTTGCCTTTTGAAGGTTCTCCCACGCGGTTATTCTGGCTTCTTCCCTCTTGATCTTGGAA
rJMCP009F08+ CTTCTTCCCTCTTGATCTTGGAA
                      ____________________________________________________________
consensus TTTGCCTTTTGAAGGTTCTCCCACGCGGTTATTCTGGCTTCTTCCCTCTTGATCTTGGAA
 
. : . : . : . : . : . :
rJMSF025F17- ATAGACTTTGTTGTTTCTGAAACTTCCCAGCTAGAAGACCGTATTTCTACAGCTTTCCTT
rJMCP009F08+ ATAGACTTTGTTGTTTCTGAAACTTCCCAGCTAGAAGACCGTATTTCTACAGCTTTCCTT
                      ____________________________________________________________
consensus ATAGACTTTGTTGTTTCTGAAACTTCCCAGCTAGAAGACCGTATTTCTACAGCTTTCCTT
 
. : . : . : . : . : . :
rJMSF025F17- CTCCAGTCATCAATACTTCCCCAGCTCCTCCCAGGGATTCGAGACCTGTGTTTCTTTGAC
rJMCP009F08+ CTCCAGTCATCAATACTTCCCCAGCTCCTCCCAGGGATTCGAGACCTGTGTTTCTTTGAC
                      ____________________________________________________________
consensus CTCCAGTCATCAATACTTCCCCAGCTCCTCCCAGGGATTCGAGACCTGTGTTTCTTTGAC
 
. : . : . : . : . : . :
rJMSF025F17- CACCTTGTTACAGTAACCCTCTCATCAACTGGAACATCCCTGACTTCTGCTTTAGAGGAA
rJMCP009F08+ CACCTTGTTACAGTAACCCTCTCATCAACTGGAACATCCCTGACTTCTGCTTTAGAGGAA
                      ____________________________________________________________
consensus CACCTTGTTACAGTAACCCTCTCATCAACTGGAACATCCCTGACTTCTGCTTTAGAGGAA
 
. : . : . : . : . : . :
rJMSF025F17- TGGACACCCAACACTTCCACAATTGGTAATACAGACGGTACTGG
rJMCP009F08+ TGGACACCCAACACTTCCACAATTGGTAATACAGACGGTACTGGGGGAGAGGAAGATGAC
                      ____________________________________________________________
consensus TGGACACCCAACACTTCCACAATTGGTAATACAGACGGTACTGGGGGAGAGGAAGATGAC
 
. : . : . : . : . : . :
rJMCP009F08+ TGAGGACTAGCCTCGGGGCTCATTTGAGTTGCCATATCCCTCCTGGAAACAACACGAGAT
                      ____________________________________________________________
consensus TGAGGACTAGCCTCGGGGCTCATTTGAGTTGCCATATCCCTCCTGGAAACAACACGAGAT
 
. : . : . : . : . : . :
rJMCP010H06+ ATCAaaGTTggggagATCTTGGGGAGCGGGTAACGAGGCT
rJMCP009F08+ ATATTGCTGGCTGCATCATTATCATTGTTCCCCTCATCTTGGGGAGCGGGTAACGAGGCT
                      ____________________________________________________________
consensus ATATTGCTGGCTGCATCATTATCATTGTTCCCCTCATCTTGGGGAGCGGGTAACGAGGCT
 
. : . : . : . : . : . :
rJMCP010H06+ AAGCTGATCAATTCAGAAAATCCATGAATACTAATTGACCTTGCCATGCATGGCTCTGTA
rJMCP009F08+ AAGCTGATCAATTCAGAAAATCCATGAATACTAATTGACCTTGCCATGCATGGCTCTGTA
                      ____________________________________________________________
consensus AAGCTGATCAATTCAGAAAATCCATGAATACTAATTGACCTTGCCATGCATGGCTCTGTA
 
. : . : . : . : . : . :
rJMCP010H06+ CAAGCAGGAAAGTTTTCACCAACTCCATGACCTCCACAATGAATAGATAAACCATTGGCT
rJMCP009F08+ CAAGCAGGAAAGTTTTCACCAACTCCATGACCTCCACAATGAATAGATAAACCATTGGCT
                      ____________________________________________________________
consensus CAAGCAGGAAAGTTTTCACCAACTCCATGACCTCCACAATGAATAGATAAACCATTGGCT
 
. : . : . : . : . : . :
rJMCP010H06+ ACCATCACTCCGGTGGAAAAAGGAGAGCTTGCTAATAAATTTATGTTATTTTCTCCTTTC
rJMCP009F08+ ACCATCACTCCGGTGGAAAAAGGAGAGCTTGCTAATAAATTTATGTTATTTTCTCCTTTC
                      ____________________________________________________________
consensus ACCATCACTCCGGTGGAAAAAGGAGAGCTTGCTAATAAATTTATGTTATTTTCTCCTTTC
 
. : . : . : . : . : . :
rJMCP010H06+ GAGACAGGAAGCGCTGGAGAATATAACGAAaacatacgtGCCCCAGGAGGC
rJMCP009F08+ GAGACAGGAAGCGCTGGAGAATATAACGAATTGTATGCAGCCCCAGGAGGCCCAAGTGGT
                      ____________________________________________________________
consensus GAGACAGGAAGCGCTGGAGAATATAACGAATTGTATGCAGCCCCAGGAGGCCCAAGTGGT