Contig 011438:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031F04Sequence624002482 (4)395011438 (4)ref|XP_006353366.1|4e-10PREDICTED: BAG family molecular chaperone regulator 1-like [Solanum tuberosum]
JMFF032B12Sequence548002482 (4)378011438 (4)ref|XP_006353366.1|2e-08PREDICTED: BAG family molecular chaperone regulator 1-like [Solanum tuberosum]
JMFS061E12Sequence620011438 (4)ref|XP_009615951.1|7e-65PREDICTED: BAG family molecular chaperone regulator 1 [Nicotiana tomentosiformi
JMSF051H17Sequence691002482 (4)628011438 (4)ref|XP_006353366.1|7e-39PREDICTED: BAG family molecular chaperone regulator 1-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFS061E12-                                                                  GAGAG
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consensus                                                                    GAGAG
 
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JMFS061E12-           AACGCTAAGATGGAGAAGGCTGCAAAGACTATATCTGAGATCAGCTTGGAGGTTGATAGG
                      ____________________________________________________________
consensus             AACGCTAAGATGGAGAAGGCTGCAAAGACTATATCTGAGATCAGCTTGGAGGTTGATAGG
 
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JMFS061E12-           CTAGCTGGACAGGTATCTGCACTTGAATCTGTTATTTCGAAAGGTGGGAAAGTTGCAGAA
                      ____________________________________________________________
consensus             CTAGCTGGACAGGTATCTGCACTTGAATCTGTTATTTCGAAAGGTGGGAAAGTTGCAGAA
 
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JMFS061E12-           AAGACTGTTGTGAACTTGATCGAGTTTTTGATGAACCAACTGCTTAAATTGGATGGTATT
rJMSF051H17+                                              CAACTGCTTAAATTGGATGGTATT
                      ____________________________________________________________
consensus             AAGACTGTTGTGAACTTGATCGAGTTTTTGATGAACCAACTGCTTAAATTGGATGGTATT
 
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JMFS061E12-           AATGGTGAAGGTGATGTTAAATTGCAGAGAAAAATGCAGGTAAAAAGAGTGCAAAAGTGT
rJMSF051H17+          AATGGNGAAGGTGATGTTAAATTGCAGAGAAAAATGCAGGTAAAAAGAGTGCAAAAGTGT
                      ____________________________________________________________
consensus             AATGGTGAAGGTGATGTTAAATTGCAGAGAAAAATGCAGGTAAAAAGAGTGCAAAAGTGT
 
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JMFS061E12-           GTTGAGACACTAGATATGTTAAAGATCAAGAACTCATTGCCAAATAGCAGCAGTGATGAT
rJMSF051H17+          GTTGAGNCACTAGATATGNTAAAGATCAAGAANTCATTGCCAAATAGCAGCAGTGATGAT
                      ____________________________________________________________
consensus             GTTGAGACACTAGATATGTTAAAGATCAAGAACTCATTGCCAAATAGCAGCAGTGATGAT
 
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JMFS061E12-           CAGGCTAATAGTCCATTGCCTGCAAGCAATGGGAATCACATTCAGAAACACCAATCACCC
rJMFF032B12+                AATAGTCCATTGCCTGCAAGCAATGGGAATCACATTCAGAAACNCCAATCACCC
rJMSF051H17+          CAGGNTAATAGTCCATTGCCTGCAAGCAATGGGAATCACATTCAGAAACANCAATCACCC
                      ____________________________________________________________
consensus             CAGGCTAATAGTCCATTGCCTGCAAGCAATGGGAATCACATTCAGAAACACCAATCACCC
 
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JMFS061E12-           TCTCCATCTCCAGCTAAACAGCAGCAGCATCATCAACACCGGTATTCATACGACTTGATT
rJMFF032B12+          TTTCCATTTNCAGGTNAACAGCAGCAGCATNATNAACCCCGGTNTTNATNCGNCTTGATT
rJMFF031F04+                          AACAGCAGCAGCATNATCAACNCCGGTATTNATNCGNCTTGATT
rJMSF051H17+          TCTNCATNTCCAGCTAAACAGCAGCAGCATCATCAACACCGGTATTCATANGACTTGATT
                      ____________________________________________________________
consensus             TCTCCATTTCCAGCTAAACAGCAGCAGCATCATCAACACCGGTATTCATACGACTTGATT
 
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JMFS061E12-           TCATTGCCAGTGCACCAGGAGGAGCCGACCGGGGGGCATTCATTCACAAATTCACCTGCA
rJMFF032B12+          TCATTGCCAGTGCNCCAGGAGGAGCCGNCCGGGGGGCATTCATTNNCAAATTCNCCTGCA
rJMFF031F04+          TCATTGCCAGTGCNCCAGGAGGANCCGNCCGGGGGGCATTCATTNACAAATTCNCCTGCA
rJMSF051H17+          TCATNGCCAGTGCACCAGGAGGAGCCGACCGGGGGGCATTCATTCACAAATTCACCTGCA
                      ____________________________________________________________
consensus             TCATTGCCAGTGCACCAGGAGGAGCCGACCGGGGGGCATTCATTCACAAATTCACCTGCA
 
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JMFS061E12-           AAAACTCCACAGCAACAGCAGCAGCCATCGAGGCGCTCGGCCTCAGGATCAGTGGTGATA
rJMFF032B12+          AAAACTNCNCAGCAACAGCAGCAGCCATTGAGGNGNTTGGCCTCAGGATCAGTGGNGATA
rJMFF031F04+          AAAACTNCNCAGCAACAGCAGCANCCATTGAGGNGNTNGGCCTCAGGATCAGTGGTGATN
rJMSF051H17+          AAAACTNCACAGCAACAGCAGCAGCCATCGNGGCGCTCGGCCTCAGGATCAGTGGTGATA
                      ____________________________________________________________
consensus             AAAACTCCACAGCAACAGCAGCAGCCATCGAGGCGCTCGGCCTCAGGATCAGTGGTGATA
 
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JMFS061E12-           ACCACGCAATGGGAGACGTTCGATTCCGCTCCAGCGCCCTTGCTGGATCACTTTTCAACC
rJMFF032B12+          ACCNCGCAATGGGNGACGTTTGATTNCGNTCCAGNGCCCTTGGTGGATCNCTTTTCAACC
rJMFF031F04+          ACCNCGCAATGGGAGACGTTTGATTNCGNTCCAGCGCCCTTGNTGGATCACTTTTNAACC
rJMSF051H17+          ACCANGCAATGGGAGACGTTNGATTNCGCTCCAGCGCCCTTGATGGATCACTTTTCAACC
                      ____________________________________________________________
consensus             ACCACGCAATGGGAGACGTTTGATTCCGCTCCAGCGCCCTTGGTGGATCACTTTTCAACC
 
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JMFS061E12-           CC                                                          
rJMFF032B12+          CCCNCTGNGAGTTTGNCCAATCCTAGGNTCAANTGGGNCTTGCTTTAATTTGAGTATATA
rJMFF031F04+          CCCNCTGNGAGTTTGNCCAATCCTAGGNTCAACTGGGNCTTNCCTTAATTTGAGTATATA
rJMSF051H17+          CCCANTGAGAGTTCGACCAATCCTAGGCTCAACTGGGACTTGCTNNAATTTGAGTATATA
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consensus             CCCACTGAGAGTTTGACCAATCCTAGGCTCAACTGGGACTTGCTTTAATTTGAGTATATA
 
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rJMFF032B12+          TGCAAANCTGCAGAGTGAAGAA                                      
rJMFF031F04+          TGCAAAGCTGCAGAGTGAAGAAGCTGTGCTAGNTG-CTGTGTGCANGTGTGTGTTGCANG
rJMSF051H17+          TGCAAAGCTGCAGAGTGAAGAAGCTGTGCTAGCTGTCTGTGTGCATGTGTGTGTTGCNTG
                      ____________________________________________________________
consensus             TGCAAAGCTGCAGAGTGAAGAAGCTGTGCTAGCTGTCTGTGTGCATGTGTGTGTTGCATG
 
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rJMFF031F04+          TTAGTTGTGNTGGTTTG                                           
rJMSF051H17+          TTAGTTGTGNTGGTTTGCTGCTATCCATTCCCCATTNTTTTCNTGTATTTATAGGGTTTT
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consensus             TTAGTTGTGNTGGTTTGCTGCTATCCATTCCCCATTNTTTTCNTGTATTTATAGGGTTTT