Contig 011432:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS145F12Sequence624011432 (6)gb|KDO77329.1|8e-113hypothetical protein CISIN_1g003514mg [Citrus sinensis]
JMSF024N18Sequence655007956 (5)ref|XP_009588750.1|7e-115PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]225011432 (6)emb|CDP11269.1|3e-35unnamed protein product [Coffea canephora]
JMSF033K22Sequence656007956 (5)ref|XP_009588750.1|2e-93PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]649011432 (6)emb|CDP11269.1|1e-96unnamed protein product [Coffea canephora]
JMSF036M06Sequence666007956 (5)ref|XP_009588750.1|3e-111PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]692011432 (6)ref|XP_009603645.1|5e-106PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]
JMSF036P05Sequence654007956 (5)ref|XP_009588750.1|2e-96PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]703011432 (6)ref|XP_009603645.1|5e-113PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]
JMSF049F04Sequence667007956 (5)ref|XP_009588750.1|7e-117PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]725011432 (6)ref|XP_009603645.1|2e-108PREDICTED: potassium transporter 11-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS145F12- GACGGCTGG
                      ____________________________________________________________
consensus GACGGCTGG
 
. : . : . : . : . : . :
JMFS145F12- ATTCAGAAATCAGAGTCAAATTGGCAATGCTTACGGCACAGCGGTCGTGATAGTCATGCT
                      ____________________________________________________________
consensus ATTCAGAAATCAGAGTCAAATTGGCAATGCTTACGGCACAGCGGTCGTGATAGTCATGCT
 
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JMFS145F12- CGTCACCACGCTTCTCATGATCTTGATAATGTTGCTAGTCTGGCACTGTCACTGGATTAT
                      ____________________________________________________________
consensus CGTCACCACGCTTCTCATGATCTTGATAATGTTGCTAGTCTGGCACTGTCACTGGATTAT
 
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JMFS145F12- CGTCGTTATCTTCACGGGATTATCTCTCGTGGTGGAGTGCACTTACTTCTCGGCGGTTCT
                      ____________________________________________________________
consensus CGTCGTTATCTTCACGGGATTATCTCTCGTGGTGGAGTGCACTTACTTCTCGGCGGTTCT
 
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JMFS145F12- TTTCAAGGTCGATCAGGGCGGTTGGGTTCCGCTTGTGATTGCTGCAGCTTTTCTGATAAT
                      ____________________________________________________________
consensus TTTCAAGGTCGATCAGGGCGGTTGGGTTCCGCTTGTGATTGCTGCAGCTTTTCTGATAAT
 
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JMFS145F12- CATGTACGTTTGGCACTATGGCACGGTGAAGCGCTATGAATTCGAGATGCACAGCAAGGT
                      ____________________________________________________________
consensus CATGTACGTTTGGCACTATGGCACGGTGAAGCGCTATGAATTCGAGATGCACAGCAAGGT
 
. : . : . : . : . : . :
JMFS145F12- CTCGATGGCTTGGATTCTCGGGCTCGGCCCGAGCTTAGGCCTAGTTCGTGTTCCCGGGAT
                      ____________________________________________________________
consensus CTCGATGGCTTGGATTCTCGGGCTCGGCCCGAGCTTAGGCCTAGTTCGTGTTCCCGGGAT
 
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JMFS145F12- AGGGCTCGTTTACACCGAGCTAGCAAGTGGAGTGCCCCATATTTTTTCTCACTTCATCAC
rJMSF036P05+ TTACACCGAGCTAGCAAGTGGAGTGCCCCATATTTTTTCTCACTTCATCAC
rJMSF036M06+ CTAGCAAGTGGAGTGCCCCATATTTTTTCTCACTTCATCAC
rJMSF049F04+ TTACACCGAGCTAGCAAGTGGAGTGCCCCATATTTTTTCTCACTTCATCAC
                      ____________________________________________________________
consensus AGGGCTCGTTTACACCGAGCTAGCAAGTGGAGTGCCCCATATTTTTTCTCACTTCATCAC
 
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JMFS145F12- GAATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
rJMSF036P05+ GAATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
rJMSF033K22+ ATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
rJMSF036M06+ GAATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
rJMSF049F04+ GAATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
                      ____________________________________________________________
consensus GAATCTACCAGCTACACATTCAGTAGTGGTATTCGTGTGTGTGAAGTATCTCCCCGTCTA
 
. : . : . : . : . : . :
JMFS145F12- TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
rJMSF036P05+ TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
rJMSF033K22+ TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
rJMSF036M06+ TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
rJMSF049F04+ TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
                      ____________________________________________________________
consensus TACAGTCCCGGAAGACGAGAGGTTCCTCGTGAAGAGGATAGGACCGAAGAACTTTCACAT
 
. : . : . : . : . : . :
JMFS145F12- GTTCCGGTGTGTTGCAAGGTATGGTTACAAAGACCTTCACANAAAAGACGATGATTNTGA
rJMSF036P05+ GTTCCGGTGTGTTGCAAGGTATGGTTACAAAAACCTTCACAAAAAAGACGATGATTTTGA
rJMSF033K22+ GTTCCGGTGTGTTGCAAGGTATGGTTACAAAGACCTTCACAAAAAAGACGATGATTTTGA
rJMSF036M06+ GTTCCGGTGTGTTGCAAGGTATGGTTACAAAGACCTTCACAAAAAAGACGATGATTTTGA
rJMSF049F04+ GTTCCGGTGTGTTGCAAGGTATGGTTACAAAGACCTTCACAAAAAAGACGATGATTTTGA
                      ____________________________________________________________
consensus GTTCCGGTGTGTTGCAAGGTATGGTTACAAAGACCTTCACAAAAAAGACGATGATTTTGA
 
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JMFS145F12- GAAAGAACTGTTTGA
rJMSF036P05+ GAAGAAACTGTTTGACAACCTCTTCACATTCGTTCGCCTCGAGTCCATGATGGAAGGCTG
rJMSF033K22+ GAAGAAACTGTTTGACAACCTCTTCACATTCGTTCGCCTCGAGTCCATGATGGAAGGCTG
rJMSF036M06+ GAAGAAACTGTTTGACAACCTCTTCACATTCGTTCGCCTCGAGTCCATGATGGAAGGCTG
rJMSF049F04+ GAAGAAACTGTTTGACAACCTCTTCACATTCGTTCGCCTCGAGTCCATGATGGAAGGCTG
                      ____________________________________________________________
consensus GAAGAAACTGTTTGACAACCTCTTCACATTCGTTCGCCTCGAGTCCATGATGGAAGGCTG
 
. : . : . : . : . : . :
rJMSF036P05+ CTCGGATTCCGACGAGTACAGCGTGTACGGGCAGCAAACACAGCAATCGAGGGATTTCCT
rJMSF033K22+ CTCGGATTCCGACGAGTACAGCGTGTACGGGCAGCAAACACAGCAATCGAGGGATTTCCT
rJMSF036M06+ CTCGGATTCCGACGAGTACAGCGTGTACGGGCAGCAAACACAGCAATCGAGGGATTTCCT
rJMSF049F04+ CTCGGATTCCGACGAGTACAGCGTGTACGGGCAGCAAACACAGCAATCGAGGGATTTCCT
                      ____________________________________________________________
consensus CTCGGATTCCGACGAGTACAGCGTGTACGGGCAGCAAACACAGCAATCGAGGGATTTCCT
 
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rJMSF036P05+ TCTGCCGAAGAACAATGGCAACACATGCACGAGCACAGACCTCACGGTGTCCTCGGTGGA
rJMSF033K22+ TCTGCCGAAGAACAATGGCAACACATGCACGAGCACAGACCTCACGGTGTCCTCGGTGGA
rJMSF036M06+ TCTGCCGAAGAACAATGGCAACACATGCACGAGCACAGACCTCACGGTGTCCTCGGTGGA
rJMSF049F04+ TCTGCCGAAGAACAATGGCAACACATGCACGAGCACAGACCTCACGGTGTCCTCGGTGGA
                      ____________________________________________________________
consensus TCTGCCGAAGAACAATGGCAACACATGCACGAGCACAGACCTCACGGTGTCCTCGGTGGA
 
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rJMSF036P05+ CTCCATCGTGCCCGTGCAGTCTCCTAGGCACGGGTGCAACATGACCATGTCGTCGGGGCT
rJMSF033K22+ CTCCATCGTGCCCGTGCAGTCTCCTAGGCACGGGTGCAACATGACCATGTCGTCGGGGCT
rJMSF036M06+ CTCCATCGTGCCCGTGCAGTCTCCTAGGCACGGGTGCAACATGACCATGTCGTCGGGGCT
rJMSF049F04+ CTCCATCGTGCCCGTGCAGTCTCCTAGGCACGGGTGCAACATGACCATGTCGTCGGGGCT
                      ____________________________________________________________
consensus CTCCATCGTGCCCGTGCAGTCTCCTAGGCACGGGTGCAACATGACCATGTCGTCGGGGCT
 
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rJMSF024N18+ GACAGCACGCAGACAGAAGTTGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
rJMSF036P05+ CGACAGCACGCAGACAGAAGTCGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
rJMSF033K22+ CGACAGCACGCAGACAGAAGTCGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
rJMSF036M06+ CGACAGCACGCAGACAGAAGTCGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
rJMSF049F04+ CGACAGCACGCAGACAGAAGTCGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
                      ____________________________________________________________
consensus CGACAGCACGCAGACAGAAGTCGACGAGCTGGAGTTCTTGAACGCTTGTAGAGATTCCGG
 
. : . : . : . : . : . :
rJMSF024N18+ GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
rJMSF036P05+ GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
rJMSF033K22+ GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
rJMSF036M06+ GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
rJMSF049F04+ GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
                      ____________________________________________________________
consensus GGTTGTACACATTCTTGGGAACACAATAGTGAGAGCAGGGAGAGATTCTCGGTTTTATAG
 
. : . : . : . : . : . :
rJMSF024N18+ GAAGATCGCCATCGNCTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
rJMSF036P05+ GAAGATCGCCATCGACTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
rJMSF033K22+ GAAGATCGCCATCGACTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
rJMSF036M06+ GAAGATCGCCATCGACTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
rJMSF049F04+ GAAGATCGCCATCGACTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
                      ____________________________________________________________
consensus GAAGATCGCCATCGACTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGC
 
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rJMSF024N18+ AATTTTCAATGTGCCTCATGAGAGCCTCTTGAA
rJMSF036P05+ AATTTTCAATGTGCCTCATGAGAGCCTCTTGAACGT
rJMSF033K22+ AATTTTCAATGTGCCTCATGAGAGCCTCTTGAACGT
rJMSF036M06+ AATTTTCAATGTGCCTCATGAGAGCCTCTTGAACGT
rJMSF049F04+ AATTTTCAATGTGCCTCATGAGAGCCTCTTGAACGTGGACAGATTATATATGTATGAATT
                      ____________________________________________________________
consensus AATTTTCAATGTGCCTCATGAGAGCCTCTTGAACGTGGACAGATTATATATGTATGAATT