Contig 011410:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF021F05+                                               GGAGTGTGTGAAGCTGTGTAGGC
rJMSF044E22+                             TTTTAGAGACCAACCAANGGAGTGTGTGAAGCTGTGTAGGC
                      ____________________________________________________________
consensus                                TTTTAGAGACCAACCAANGGAGTGTGTGAAGCTGTGTAGGC
 
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rJMSF021F05+          C-TGGCACAAGCATAAGAGAGATACATGACTACTCGGTTGAAAAGATGAAGAAAGCGTTC
rJMSF044E22+          CNNGGCACAAGCATAAGAGAGATACATGACTACTCGGTTGAAAAGATGAAGAAAGCGTTC
                      ____________________________________________________________
consensus             CNTGGCACAAGCATAAGAGAGATACATGACTACTCGGTTGAAAAGATGAAGAAAGCGTTC
 
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rJMSF021F05+          CAGGAGATTGGACTACTAAAAGACAACCGGCCTGAAAGATATCATATGCTAAATCCAACC
rJMSF044E22+          CAGGAGATTGGACTACTAAAAGACAACCGGCCTGAAAGATATCATATGCTAAATCCAACC
                      ____________________________________________________________
consensus             CAGGAGATTGGACTACTAAAAGACAACCGGCCTGAAAGATATCATATGCTAAATCCAACC
 
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rJMSF021F05+          AGTATAGGTCATTATCTAGGAATGGACGTTCATGATTGTTCTACTGTTAGCTACAATAGG
rJMSF044E22+          AGTATAGGTCATTATCTAGGAATGGACGTTCATGATTGTTCTACTGTTAGCTACAATAGG
                      ____________________________________________________________
consensus             AGTATAGGTCATTATCTAGGAATGGACGTTCATGATTGTTCTACTGTTAGCTACAATAGG
 
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rJMSF021F05+          ACTCTGAAGCCTGGTGTTGTGATCACAATTGAACCGGGGGTATACATCCCTTCAAATTCT
rJMSF044E22+          ACTCTGAAGCCTGGTGTTGTGATCACAATTGAACCGGGGGTATACATCCCTTCAAATTCT
                      ____________________________________________________________
consensus             ACTCTGAAGCCTGGTGTTGTGATCACAATTGAACCGGGGGTATACATCCCTTCAAATTCT
 
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rJMSF021F05+          GATGTTCCCGAAAGGTATCGAGGCATTGGGATAAGAATCGAAGATGATGTCCTCATCACA
rJMSF044E22+          GATGTTCCCGAAAGGTATCGAGGCATTGGGATAAGAATCGAAGATCATGTCCTCATCACA
                      ____________________________________________________________
consensus             GATGTTCCCGAAAGGTATCGAGGCATTGGGATAAGAATCGAAGATGATGTCCTCATCACA
 
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rJMSF021F05+          GAAACAGGCTATGAGGTACTCACAGGATCAATACCCAAGGAAATCAAGCACATTGAATCC
rJMSF044E22+          GAAACAGGCTATGAGGTACTCACAGGATCAATACCCAAGGAAATCAAGCACATTGAATCC
                      ____________________________________________________________
consensus             GAAACAGGCTATGAGGTACTCACAGGATCAATACCCAAGGAAATCAAGCACATTGAATCC
 
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rJMSF021F05+          CTTCTAAACAACTTTAGCAATGGAATGGAATCTCGTAACTCCACAAGAGCAGCATTGAGT
rJMSF044E22+          CTTCTAAACAACTTTAGCAATGGAATGGAATCTCGTAACTCCACAAGAGCAGCATTGAGT
                      ____________________________________________________________
consensus             CTTCTAAACAACTTTAGCAATGGAATGGAATCTCGTAACTCCACAAGAGCAGCATTGAGT
 
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rJMSF021F05+          TAGTTTTTCCTTGAACCTTTGCGATTTGAAGACAGCAACACACTATTGAATTAAGAGCAC
rJMSF044E22+          TAGTTTTTCCTTGAACCTTTGCGATTTGAAGACAGCAACACACTATTGAATTAAGAGCAC
                      ____________________________________________________________
consensus             TAGTTTTTCCTTGAACCTTTGCGATTTGAAGACAGCAACACACTATTGAATTAAGAGCAC
 
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rJMSF021F05+          GAGTGGCGCCGCCCGGCTAGCACCTAGCTAGCGCCTTCTACAACCTTGCTTATTATTGGA
rJMSF044E22+          GAGTGGCGCCGCCCGGCTAGCACCTAGCTAGCGCCTTCTACAACCTTGCTTATTATTGGA
                      ____________________________________________________________
consensus             GAGTGGCGCCGCCCGGCTAGCACCTAGCTAGCGCCTTCTACAACCTTGCTTATTATTGGA
 
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rJMSF021F05+          ATGGTCGAGTAGGTTTGGCTGTTCAACAGTTTCAGTGTTCACATTAGAAACTTGAGAGCT
rJMSF044E22+          ATGGTCGAGTAGGTTTGGCTGTTCAACAGTTTCAGTGTTCACATTAGAAACTTGAGAGCT
                      ____________________________________________________________
consensus             ATGGTCGAGTAGGTTTGGCTGTTCAACAGTTTCAGTGTTCACATTAGAAACTTGAGAGCT
 
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rJMSF021F05+          TACAAAATTGTTGCTTTTCTGTATCTATCTTTTCAATTTGAAGGAGTGGTAGTTGATCCT
rJMSF044E22+          TACAAAATTGTTGCTTTTCTGTATCTATCTTTTCAATTTGAAGGAGTGGTAGTTGATCCT
                      ____________________________________________________________
consensus             TACAAAATTGTTGCTTTTCTGTATCTATCTTTTCAATTTGAAGGAGTGGTAGTTGATCCT
 
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rJMSF021F05+          CTCAACCACCACAGGTGAACCTCCCAACTCCCTT                          
rJMSF044E22+          CTCAACCACCACAGGTGAACCTCCCAACTCCCTTTGCAATTAATTTCTCCAGCTAATAAT
                      ____________________________________________________________
consensus             CTCAACCACCACAGGTGAACCTCCCAACTCCCTTTGCAATTAATTTCTCCAGCTAATAAT
 
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rJMSF044E22+          TAATTCTGTGCAGTGGATTTTCAATTATTAGTTTTTATTTCTGTATGTAAGTATTGCCAA
                      ____________________________________________________________
consensus             TAATTCTGTGCAGTGGATTTTCAATTATTAGTTTTTATTTCTGTATGTAAGTATTGCCAA