Contig 011408:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007G12Sequence764011408 (5)gb|ACU17345.1|5e-36unknown [Glycine max]
JMSF001A06Sequence281000669 (7)ref|XP_009804525.1|3e-32PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform 744011408 (5)gb|ACU17345.1|7e-31unknown [Glycine max]
JMSF013G14Sequence537000669 (7)ref|XP_009804525.1|1e-51PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform 738011408 (5)gb|ACU17345.1|2e-27unknown [Glycine max]
JMSF026N12Sequence684000669 (7)ref|XP_009804525.1|4e-91PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform 759011408 (5)gb|ACU17345.1|4e-29unknown [Glycine max]
JMSF043O02Sequence747000669 (7)ref|XP_009804525.1|2e-112PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit isoform 801011408 (5)ref|XP_010243441.1|3e-42PREDICTED: serine/threonine-protein phosphatase PP2A-4 catalytic subunit-like [

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043O02+ TGAAGCTTGTTGCTAGAGCACA
                      ____________________________________________________________
consensus TGAAGCTTGTTGCTAGAGCACA
 
. : . : . : . : . : . :
rJMSF001A06+ GCTCATGACCAAAAGGTTGGTACCATATTCAG
rJMSF026N12+ GTTACCATATTCAG
rJMFF007G12+ TGGGCTCATGACCAAAAGGTTGTTACCATATTCAG
rJMSF013G14+ GGTTGTTACCATATTCAG
rJMSF043O02+ CCAGCTGGTTATGGAGGGATTCAATNGGGCTCATGACCAAAAGGTTGTTACCATATTCAG
                      ____________________________________________________________
consensus CCAGCTGGTTATGGAGGGATTCAATTGGGCTCATGACCAAAAGGTTGTTACCATATTCAG
 
. : . : . : . : . : . :
rJMSF001A06+ TGCTCCTAATTATTGTTATCGATGTGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
rJMSF026N12+ TGCTCCTAATTATTGTTATCGATGTGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
rJMFF007G12+ TGCTCCTAATTATTGTTATCGATGTGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
rJMSF013G14+ TGCTCCTAATTATTGTTATCGATGNGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
rJMSF043O02+ TGCTCCTAATTATTGTTATCGATGTGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
                      ____________________________________________________________
consensus TGCTCCTAATTATTGTTATCGATGTGGAAATATGGCATCCATTCTAGAAGTCGATGACTG
 
. : . : . : . : . : . :
rJMSF001A06+ CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
rJMSF026N12+ CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
rJMFF007G12+ CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
rJMSF013G14+ CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
rJMSF043O02+ CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
                      ____________________________________________________________
consensus CAAAGGCCATACATTCATTCAGTTTGACCCAGCCCCAAGGAGAGGGGAGCCGGATGTAAC
 
. : . : . : . : . : . :
rJMSF001A06+ CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
rJMSF026N12+ CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
rJMFF007G12+ CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
rJMSF013G14+ CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
rJMSF043O02+ CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
                      ____________________________________________________________
consensus CCGAAGAACACCAGAATACTTCCTGTAAAGCAGCTCTATGAAGAGAGCTGGGTTCTGTGC
 
. : . : . : . : . : . :
rJMSF001A06+ AGAAGCTCACACCATAGCTGCTTAGCCTGGTGGCTTCTTAGTAATTGACACTTGCAGTTC
rJMSF026N12+ AGAAGCTCACACCATAGCTGCTTAGCCTGGTGGCTTCTTAGTAATTGACACTTGCAGTTC
rJMFF007G12+ AGAAGCTCACACCATAGCTGCTTAGCCTGGTGGCTTCTTAGTAATTGACACTTGCAGTTC
rJMSF013G14+ AGAAGCTCACNCCATAGCTGCTTAGCCTGGTGGCTTNTTAGTAATTGACACNCGCAGTTC
rJMSF043O02+ AGAAGCTCACACCATAGCTGCTTAGCCTGGTGGCTTCTTAGTAATTGACACTTGCAGTTC
                      ____________________________________________________________
consensus AGAAGCTCACACCATAGCTGCTTAGCCTGGTGGCTTCTTAGTAATTGACACTTGCAGTTC
 
. : . : . : . : . : . :
rJMSF001A06+ TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGACTTCTCTGAGTTG
rJMSF026N12+ TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGACTTCTCTGAGTTG
rJMFF007G12+ TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGACTTCTCTGAGTTG
rJMSF013G14+ TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGANTTCTNTGAGTTG
rJMSF043O02+ TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGACTTCTCTGAGTTG
                      ____________________________________________________________
consensus TGTTGTTGGTGAGATGGCATAAAGCATGTAGAAAAGGACAGGTGAGACTTCTCTGAGTTG
 
. : . : . : . : . : . :
rJMSF001A06+ CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTTGATTAGGGTTCCTGCG
rJMSF026N12+ CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTTGATTAGGGTTCCTGCG
rJMFF007G12+ CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTTGATTAGGGTTCCTGCG
rJMSF013G14+ CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTNGANTAGGGTTCCTGCG
rJMSF043O02+ CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTTGATTAGGGTTCCTGCG
                      ____________________________________________________________
consensus CTGTCCAGAAACCTTTCCGCAATACAATTAAGAGCCTGAAGCTTGATTAGGGTTCCTGCG
 
. : . : . : . : . : . :
rJMSF001A06+ TATGTATCATTTCATGCGTTAGTTTTGTTACTCGTTCTATTAATTTCCTTCCATTTTTCC
rJMSF026N12+ TATGTATCATTTCATGCGTTAGTTTTGTTACTCGTTCTATTAATTTCCTTCCATTTTTCC
rJMFF007G12+ TATGTATCATTTCATGCGTTAGTTTTGTTACTCGTTCTATTAATTTCCTTCCATTTTTCC
rJMSF013G14+ TATGTATCATTTCATGCGTTAGTTTTGTTACTCGNTCTATTAATTTCCTTCCATTNTTCC
rJMSF043O02+ TATGTATCATTTCATGCGTTAGTTTTGTTACTCGTTCTATTAATTTCCTTCCATTTTTCC
                      ____________________________________________________________
consensus TATGTATCATTTCATGCGTTAGTTTTGTTACTCGTTCTATTAATTTCCTTCCATTTTTCC
 
. : . : . : . : . : . :
rJMSF001A06+ GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACTTGTGTTC
rJMSF026N12+ GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACTTGTGTTC
rJMFF007G12+ GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACTTGTGTTC
rJMSF013G14+ GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACNTGTGTTC
rJMSF043O02+ GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACTTGTGTTC
                      ____________________________________________________________
consensus GTTTCTTTCATTCTTCTAGTAGGGTAACCATTTTTTAACTTCTCTCCAGTACTTGTGTTC
 
. : . : . : . : . : . :
rJMSF001A06+ CTTATATAGCATTAACGTCAGGTGCATTCTGTCTTTAGATGAAAGACCAGTCATAAAATT
rJMSF026N12+ CTTATATAGCATTAACGTCAGGTGCATTCTGTCTTTAGATGAAAGACCAGTCATAAAATT
rJMFF007G12+ CTTATATAGCATTAACGTCAGGTGCATTCTGTCTTTAGATGAAAGACCAGTCATAAAATT
rJMSF013G14+ CTTATATAGCATTAACGTCAGGNGCATTCTGTCNTTAGATGAAAGACCAGTCATAAAATT
rJMSF043O02+ CTTATATAGCATTAACGTCAGGTGCATTCTGTCTTTAGATGAAAGACCAGTCATAAAATT
                      ____________________________________________________________
consensus CTTATATAGCATTAACGTCAGGTGCATTCTGTCTTTAGATGAAAGACCAGTCATAAAATT
 
. : . : . : . : . : . :
rJMSF001A06+ TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCATGGCGG
rJMSF026N12+ TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCATGGCGG
rJMFF007G12+ TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCATGGCGG
rJMSF013G14+ TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCANGGCGG
rJMSF043O02+ TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCATGGCGG
                      ____________________________________________________________
consensus TTCTGTATTGGGTGGTTTTAAACCCTAATTTTTCTTTGTTGATCTGTTGATCCATGGCGG
 
. : . : . : . : . : . :
rJMSF001A06+ CTGACCGGAAGCAATCTCTTCTAGGTTTAGCCACCCAAAAAAACAGAATTGCCAGGTCT-
rJMSF026N12+ CTGACCGGAAGCAATCTCTTCTAGGTTTAGCCACCC-AAAAAACAGAATTGCCAGGTCT-
rJMFF007G12+ CTGNCCGGAAGCAATCTCTTNTAGGTTTAGCCACCC-AAAAAACAGAATTGCCAGGTCTC
rJMSF013G14+ CTGACCGGAAGCAATCTCTTCTAGGTTTAGCCACCCAAAAAAACAGAATTGCCAGGTCT-
rJMSF043O02+ CTGACCGGAAGCAATCTCTTCTAGGTTTAGCCACCCAAAAAAACAGAATTGCCAGGTCT-
                      ____________________________________________________________
consensus CTGACCGGAAGCAATCTCTTCTAGGTTTAGCCACCCAAAAAAACAGAATTGCCAGGTCT-
 
. : . : . : . : . : . :
rJMSF001A06+ TTCTGCTTTGTAGTATTGTTTTTTGTCTTTGCTGTTTGAGTATGTAAGGCTAC
rJMSF026N12+ TTCTGCTTTGTAGTATTGTTTTTTGTCTTTGCTGTTTGAGTATGTAAGGCTAC
rJMFF007G12+ TTCTGCTTTGTAGTATNGTTTTTTGTCTTTGCNGTTTGAGTATGTAAGGCTAC
rJMSF013G14+ TTCTGCTTTGTAGTATTG
rJMSF043O02+ TTCTGCTTTGTAGTATTGTTTTTTGTCTTTGCTGTTTGAGTATGTAAGGCTACCAACTTG
                      ____________________________________________________________
consensus TTCTGCTTTGTAGTATTGTTTTTTGTCTTTGCTGTTTGAGTATGTAAGGCTACCAACTTG