Contig 011404:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014L13Sequence198005018 (3)789011404 (3)ref|XP_009759751.1|8e-101PREDICTED: leucine-rich repeat receptor-like protein CLAVATA2 [Nicotiana sylves
JMSF014P01Sequence389005018 (3)ref|XP_008218434.1|2e-04PREDICTED: leucine-rich repeat receptor-like protein CLAVATA2 [Prunus mume]757011404 (3)ref|XP_009759751.1|1e-88PREDICTED: leucine-rich repeat receptor-like protein CLAVATA2 [Nicotiana sylves
JMSF042P23Sequence601005018 (3)ref|XP_011084648.1|2e-37PREDICTED: leucine-rich repeat receptor-like protein CLAVATA2 [Sesamum indicum]721011404 (3)ref|XP_009759751.1|8e-89PREDICTED: leucine-rich repeat receptor-like protein CLAVATA2 [Nicotiana sylves

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF014L13+ CTGGTTATTCGCGTTTCCAGGGATCAACACTCTGGACTTTTCTGG
                      ____________________________________________________________
consensus CTGGTTATTCGCGTTTCCAGGGATCAACACTCTGGACTTTTCTGG
 
. : . : . : . : . : . :
rJMSF014L13+ GAACAAGTTCTCTGGCTATATCCCCGATGTTAACTCTAACACTAGTTTGAATTTCAACAA
rJMSF014P01+ TCCCCGATGTTAACTCTAACACTAGTTTGAATTTCAACAA
rJMSF042P23+ A
                      ____________________________________________________________
consensus GAACAAGTTCTCTGGCTATATCCCCGATGTTAACTCTAACACTAGTTTGAATTTCAACAA
 
. : . : . : . : . : . :
rJMSF014L13+ CAATGATGTTGGGAGACGCGTTCTGATTTCATTCCGCGAGCTAAGTATAAAGACTTTTGT
rJMSF014P01+ CAATGATGTTGGGAGACGCGTTCTGATTTCATTCCGCGAGCTAAGTATAAAGACTTTTGT
rJMSF042P23+ CAATGATGTTGGGAGACGCGTTCTGATTTCATTCCGCGAGCTAAGTATAAAGACTTTTGT
                      ____________________________________________________________
consensus CAATGATGTTGGGAGACGCGTTCTGATTTCATTCCGCGAGCTAAGTATAAAGACTTTTGT
 
. : . : . : . : . : . :
rJMSF014L13+ GATTGTGGCTGACAAAACTGAGTTGAGCTTCAACTACGACCTCTCAACCGTAACTGGAAT
rJMSF014P01+ GATTGTGGCTGACAAAACTGAGTTGAGCTTCAACTACGACCTCTCAACCGTAACTGGAAT
rJMSF042P23+ GATTGTGGCTGACAAAACTGAGTTGAGCTTCAACTACGACCTCTCAACCGTAACTGGAAT
                      ____________________________________________________________
consensus GATTGTGGCTGACAAAACTGAGTTGAGCTTCAACTACGACCTCTCAACCGTAACTGGAAT
 
. : . : . : . : . : . :
rJMSF014L13+ TGATCTCTCGGGTAATTTGCTGCACGGTGAAATCCCCGAGAGTCTGTTCGGCCTGCGTGG
rJMSF014P01+ TGATCTCTCGGGTAATTTGCTGCACGGTGAAATCCCCGAGAGTCTGTTCGGCCTGCGTGG
rJMSF042P23+ TGATCTCTCGGGTAATTTGCTGCACGGTGAAATCCCCGAGAGTCTGTTCGGCCTGCGTGG
                      ____________________________________________________________
consensus TGATCTCTCGGGTAATTTGCTGCACGGTGAAATCCCCGAGAGTCTGTTCGGCCTGCGTGG
 
. : . : . : . : . : . :
rJMSF014L13+ TTTGGAGTACTTGAATTTGTCACGTAATTTTCTTGATGGTCAAGTTCCGGGAAGCTTAGG
rJMSF014P01+ TTTGGAGTACTTGAATTTGTCACGTAATTTTCTTGATGGTCAAGTTCCGGGAAGCTTAGG
rJMSF042P23+ TTTGGAGTACTTGAATTTGTCACGTAATTTTCTTGATGGTCAAGTTCCGGGAAGCTTAGG
                      ____________________________________________________________
consensus TTTGGAGTACTTGAATTTGTCACGTAATTTTCTTGATGGTCAAGTTCCGGGAAGCTTAGG
 
. : . : . : . : . : . :
rJMSF014L13+ GAGGATGCAGAATTTAAAGGCCCTGGATTTGTCACACAATTCTTTATCTGGTCAAATTCC
rJMSF014P01+ GAGGATGCAGAATTTAAAGGCCCTGGATTTGTCACACAATTCTTTATCTGGTCAAATTCC
rJMSF042P23+ GAGGATGCAGAATTTAAAGGCCCTGGATTTGTCACACAATTCTTTATCTGGTCAAATTCC
                      ____________________________________________________________
consensus GAGGATGCAGAATTTAAAGGCCCTGGATTTGTCACACAATTCTTTATCTGGTCAAATTCC
 
. : . : . : . : . : . :
rJMSF014L13+ CGAAAACATATCCAGCCTCGGGAATTTGACGATTTTGAACCTGTCATTTAACTGTTTCTC
rJMSF014P01+ CGAAAACATATCCAGCCTCGGGAATTTGACGATTTTGAACCTGTCATTTAACTGTTTCTC
rJMSF042P23+ CGAAAACATATCCAGCCTCGGGAATTTGACGATTTTGAACCTGTCATTTAACTGTTTCTC
                      ____________________________________________________________
consensus CGAAAACATATCCAGCCTCGGGAATTTGACGATTTTGAACCTGTCATTTAACTGTTTCTC
 
. : . : . : . : . : . :
rJMSF014L13+ TGGAATTGTTCCTCGTAAGCAGGGGTATTGGAGATTCCCGGGAGCATTTGCTGGCAACCC
rJMSF014P01+ TGGAATTGTTCCTCGTAAGCAGGGGTATTGGAGATTCCCGGGAGCATTTGCTGGCAACCC
rJMSF042P23+ TGGAATTGTTCCTCGTAAGCAGGGGTATTGGAGATTCCCGGGAGCATTTGCTGGCAACCC
                      ____________________________________________________________
consensus TGGAATTGTTCCTCGTAAGCAGGGGTATTGGAGATTCCCGGGAGCATTTGCTGGCAACCC
 
. : . : . : . : . : . :
rJMSF014L13+ CGACCTGTGTGTGGAGTCGCCCAGTGATGGGTGTAGGACGAAAAACTTTGCAGTGAAACA
rJMSF014P01+ CGACCTGTGTGTGGAGTCGCCCAGTGATGGGTGTAGGACGAAAAACTTTGCAGTGAAACA
rJMSF042P23+ CGACCTGTGTGTGGAGTCGCCCAGTGATGGGTGTAGGACGAAAAACTTTGCAGTGAAACA
                      ____________________________________________________________
consensus CGACCTGTGTGTGGAGTCGCCCAGTGATGGGTGTAGGACGAAAAACTTTGCAGTGAAACA
 
. : . : . : . : . : . :
rJMSF014L13+ CGGGAGAACGTTTGAAGACATGGATGACGGACCAATCTCGGTTTGGGTCTTCTGCATTAG
rJMSF014P01+ CGGGAGAACGTTTGAAGACATGGATGACGGACCAATCTCGGTTTGGGTCTTCTGCATTAG
rJMSF042P23+ CGGGAGAACGTTTGAAGACATGGATGACGGACCAATCTCGGTTTGGGTCTTCTGCATTAG
                      ____________________________________________________________
consensus CGGGAGAACGTTTGAAGACATGGATGACGGACCAATCTCGGTTTGGGTCTTCTGCATTAG
 
. : . : . : . : . : . :
rJMSF014L13+ TGCTTTTGTAAGTTTTTACGGTTGTGTCATCGCCCTTTTCTGTTCAGCTCGAACGAGAAA
rJMSF014P01+ TGCTTTTGTAAGTTTTTACGGTTGTGTCATCGCCCTTTTCTGTTCAGCTCGAACGAGAAA
rJMSF042P23+ TGCTTTTGTAAGTTTTTACGGTTGTGTCATCGCCCTTTTCTGTTCAGCTCGAACGAGAAA
                      ____________________________________________________________
consensus TGCTTTTGTAAGTTTTTACGGTTGTGTCATCGCCCTTTTCTGTTCAGCTCGAACGAGAAA
 
. : . : . : . : . : . :
rJMSF014L13+ CTACATTCTGCAGACAAAAATCTAATGTATTACACGCGATGGGAATGGTAACTTTCGCTG
rJMSF014P01+ CTACATTCTGCAGACAAAAATCTAATGTATTACACGCGATGGGAATGGTAACTTTCGCTG
rJMSF042P23+ CTACATTCTGCAGACAAAAATCTAATGTATTACACGCGATGGGAATGGTAACTTTCGCTG
                      ____________________________________________________________
consensus CTACATTCTGCAGACAAAAATCTAATGTATTACACGCGATGGGAATGGTAACTTTCGCTG
 
. : . : . : . : . : . :
rJMSF014L13+ TACAGTAACTTAATTCTGATATCT
rJMSF014P01+ TACAGTAACTTAATTCTGATATCT
rJMSF042P23+ TACAGTAACTTAATTCTGATATCTAATTTGCACTTCTTGCTTCATCAAGTATAACCCCTG
                      ____________________________________________________________
consensus TACAGTAACTTAATTCTGATATCTAATTTGCACTTCTTGCTTCATCAAGTATAACCCCTG